| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200633
Identifier: 87200633
GI number: 87200633
Start: 2834191
End: 2835159
Strand: Reverse
Name: 87200633
Synonym: Saro_2620
Alternate gene names: NA
Gene position: 2835159-2834191 (Counterclockwise)
Preceding gene: 87200634
Following gene: 87200632
Centisome position: 79.6
GC content: 69.76
Gene sequence:
>969_bases ATGATGCGCAAAGTGCGATGGCCAGTTCTTGCGGGAACCGAACACCAGACGGAGCCCCGCCATGCTGCTTGCAACGCTTA TCGCCGCCGCTCTCCCCATCTCGGCTGCTGCACCCGCGCTGGGCACCGCCTGGGCGGTCACCTGCGCCGCGGCTCCGGGC CGTCCGGCCAACTGCCTGCCGCACAAGGACGCGCGCGAGGCGGCACCGCGCCACTCGGCCGCCAGCCGCATCGTCTGCCA TCCCGATCCGACCAAGAGCATCCACTGCTTCAACCAGAAGGCCCGCAAGGCCGCAGAGCAGCGAGCCGAAGCCGCGCGCA AGGCGGACGAGGCGTGACCCGCGCGAACCCGCGCCGCCGGTCGCTCGCCCTGGTCGCCGGGGCCGCTTTCTGCGCCGTGG CGAGCCAACCGGCTGCTGCCCTCGATCGGCTTCCGGCCGGCCTTGCTGCATTGGACCCGGCCCACTTCGCCGAGCGTGTC GACGTCCAGCGCCGGGAGGATGGTGCACTGGTTCTTTCCACCGCCAACGGCTGGACCGGTGCCCACGATGTGAAGGGCGC CCATGCCCGCGACATCCATTTGCGCGCCGTGCTCGCCCCCTCCCGCTCCGGGCAGGCCATCCAGGTCTGGCATGAACTGG TCTACGAAGGTTCGCATCTCGATTTCCGCACTGCCACGCTGGAGGTGGGTGGCCGCCGGCACGTCCTCCCGTTGTCCGGC GTGGAGCATTGGGAAGAGGATTGCCCAGGCCCCGACAGTGTCGGCAGGTGCAATCTGCACTCGCGCATCTCGGTCGATCT CCCTGTCGGGATGGCGCGCGAAATCGCCGCCACCTGGCCGGGCAATGGCCGTGTGCCCGCGCGCATCCGCTTCGAGGACC CGCATGGAAACACGGTGACCAGCGGGCTGGCCCCCGCCGAAGTTGCCGGCCTTCTCAAGGTCTTCGACGTTCACGGCGGG CAGAGCTGA
Upstream 100 bases:
>100_bases TGTCATGTGGCTCGGCCCCAGCGAAGCGCTCGACATCAGCCAGTTTCTTCCTCGCTGACGACCTTTTGCAGTTCAGCAAC ATTTTGTCATTGCCGCGCCC
Downstream 100 bases:
>100_bases CCTTCAACCTTGGCAGCGCGCGCGTGGGAACCTATCTTGCTCGCCGCTGCCGCAATTCTTCCGGGATCTCATGCAATCTC CCTCGATCGTACTGGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MMRKVRWPVLAGTEHQTEPRHAACNAYRRRSPHLGCCTRAGHRLGGHLRRGSGPSGQLPAAQGRARGGTAPLGRQPHRLP SRSDQEHPLLQPEGPQGRRAASRSRAQGGRGVTRANPRRRSLALVAGAAFCAVASQPAAALDRLPAGLAALDPAHFAERV DVQRREDGALVLSTANGWTGAHDVKGAHARDIHLRAVLAPSRSGQAIQVWHELVYEGSHLDFRTATLEVGGRRHVLPLSG VEHWEEDCPGPDSVGRCNLHSRISVDLPVGMAREIAATWPGNGRVPARIRFEDPHGNTVTSGLAPAEVAGLLKVFDVHGG QS
Sequences:
>Translated_322_residues MMRKVRWPVLAGTEHQTEPRHAACNAYRRRSPHLGCCTRAGHRLGGHLRRGSGPSGQLPAAQGRARGGTAPLGRQPHRLP SRSDQEHPLLQPEGPQGRRAASRSRAQGGRGVTRANPRRRSLALVAGAAFCAVASQPAAALDRLPAGLAALDPAHFAERV DVQRREDGALVLSTANGWTGAHDVKGAHARDIHLRAVLAPSRSGQAIQVWHELVYEGSHLDFRTATLEVGGRRHVLPLSG VEHWEEDCPGPDSVGRCNLHSRISVDLPVGMAREIAATWPGNGRVPARIRFEDPHGNTVTSGLAPAEVAGLLKVFDVHGG QS >Mature_322_residues MMRKVRWPVLAGTEHQTEPRHAACNAYRRRSPHLGCCTRAGHRLGGHLRRGSGPSGQLPAAQGRARGGTAPLGRQPHRLP SRSDQEHPLLQPEGPQGRRAASRSRAQGGRGVTRANPRRRSLALVAGAAFCAVASQPAAALDRLPAGLAALDPAHFAERV DVQRREDGALVLSTANGWTGAHDVKGAHARDIHLRAVLAPSRSGQAIQVWHELVYEGSHLDFRTATLEVGGRRHVLPLSG VEHWEEDCPGPDSVGRCNLHSRISVDLPVGMAREIAATWPGNGRVPARIRFEDPHGNTVTSGLAPAEVAGLLKVFDVHGG QS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34458; Mature: 34458
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKVRWPVLAGTEHQTEPRHAACNAYRRRSPHLGCCTRAGHRLGGHLRRGSGPSGQLPA CCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC AQGRARGGTAPLGRQPHRLPSRSDQEHPLLQPEGPQGRRAASRSRAQGGRGVTRANPRRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH SLALVAGAAFCAVASQPAAALDRLPAGLAALDPAHFAERVDVQRREDGALVLSTANGWTG HEEEHHHHHHHHHHCCCHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCC AHDVKGAHARDIHLRAVLAPSRSGQAIQVWHELVYEGSHLDFRTATLEVGGRRHVLPLSG CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEECCC VEHWEEDCPGPDSVGRCNLHSRISVDLPVGMAREIAATWPGNGRVPARIRFEDPHGNTVT HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHEECCCCCCCCEEEEEECCCCCCCC SGLAPAEVAGLLKVFDVHGGQS CCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMRKVRWPVLAGTEHQTEPRHAACNAYRRRSPHLGCCTRAGHRLGGHLRRGSGPSGQLPA CCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC AQGRARGGTAPLGRQPHRLPSRSDQEHPLLQPEGPQGRRAASRSRAQGGRGVTRANPRRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH SLALVAGAAFCAVASQPAAALDRLPAGLAALDPAHFAERVDVQRREDGALVLSTANGWTG HEEEHHHHHHHHHHCCCHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCC AHDVKGAHARDIHLRAVLAPSRSGQAIQVWHELVYEGSHLDFRTATLEVGGRRHVLPLSG CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEECCC VEHWEEDCPGPDSVGRCNLHSRISVDLPVGMAREIAATWPGNGRVPARIRFEDPHGNTVT HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHEECCCCCCCCEEEEEECCCCCCCC SGLAPAEVAGLLKVFDVHGGQS CCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA