| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is cyp124 [H]
Identifier: 87200621
GI number: 87200621
Start: 2819584
End: 2820849
Strand: Direct
Name: cyp124 [H]
Synonym: Saro_2608
Alternate gene names: 87200621
Gene position: 2819584-2820849 (Clockwise)
Preceding gene: 87200619
Following gene: 87200622
Centisome position: 79.17
GC content: 64.3
Gene sequence:
>1266_bases ATGCAATTTCCCTTCTCGCGCTCGACCAACCCCAACGTCGACCTGTCATCGCTCGACGCGTTCAACGAGGGCGCGCCCTT CGCGACTTTCGACCGCATGCGCCGGGAGGACCCGATGGCGTGGTCCGAAATGGTCAACGGCGATCGCGGCTTCTGGTCGG TGACGCGCCATGCCGATCTCCTCGAACTGAACCGACAGGCGGACCTCCTGTCCTCGGCCAAGGGCATCCGCATGGAGGAC CAGACCGAGGAGGAATACGAGGCGCGCAAGACCTTCCAGGAAACCGACGCGCCGCACCACCGTGGTTTCCGTGCGCTGGT TTCCAAGGCCTTCTCGAAAGGCACCGTCGCCGGCTTCGAGGACCAGATCCGCAAGATCGTGACCGACCTGCTCGACGTGG CGCTGGCCGAGGGCGAGTTCGACGCGGTCGACCGCATCGCGCGACGCCTGCCGATGCAGATGCTCGCGCAGATCATGGGC GTACCGCAGGAAGACGGGCCGTGGCTGGTGGAAAAGGGCGACGCGCTGATTTCCAACTCCGACCCCGACTATACCGATTT CGTGGTCGATCAGGTGGATACGGAAGCCTACCGGATGCTGCCGTTCCGCTCGCCTGCGGCGGTCGAGTTGTTCGACTATG CCAACGGCCTGCTCGACCGGATGGACGCGGGCGAACAGATCGGGGTGCTGAACCTTGTCCGCGAGCCGACCAGCACCGGC ACGCGAATGAGCCGCGACGAGTTCCGCAACTTCTTCTGCCTTCTGGTCGCAGCCGGAAACGACACGACGCGCTACTCGAT CTCTGCGACGATCCACGCGCTCGCCAACAACCCCCACCTGTTGCAGGCGCTGAAGGACGGCGACTTCACGAGCTGGGAAG CAGCCGCGGACGAGATGATCCGCTATGCCTCGCCCACGACGCACTTCCGTCGCACCGCCACCCGCGACTTCACCTTCCAC GACCGGCACGTGAAGGCTGGCGACAAGGTGCTGCTGTGGTTCATTTCGGGCAACCGCGACGAGACCGCCATTCTCGATCC CTACACGATCAACCTTCGCCGGGAACGCAACCCGTTCCTCTCGTTCGGCCAGGGCGGCCCGCACATCTGCCTTGGCATGT GGCTGGCCAAGCTCGAGGTCGCGATCGTCATGCAGGAACTCGCCAAGCGCCTCTCCAGCATCGAGCAGGTCGCGGAGCAC AGCTACCTGCGGTCAAACTTCATTCACGGCATCAAGCACCTGCCGGTTCGCATTGTCGCCCGCTGA
Upstream 100 bases:
>100_bases AAGTCCGGCCGACCTGAATAGCCCCCGTCGAGTCTGTCCGCTTATGCCAAGTCCCCCGCGCCTCGCCGGGACTAGCACCG CATCAGGACTGGAGGACCAG
Downstream 100 bases:
>100_bases ACGCAGTCCGCAAAGGACTGCCGGAAAAAGCGGAAGCGACCTGGGGAGACACATGAACACCATGCCGAAGATCGACGCTC AGTTCGCGCAAGGTCTTGCT
Product: cytochrome P450 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MQFPFSRSTNPNVDLSSLDAFNEGAPFATFDRMRREDPMAWSEMVNGDRGFWSVTRHADLLELNRQADLLSSAKGIRMED QTEEEYEARKTFQETDAPHHRGFRALVSKAFSKGTVAGFEDQIRKIVTDLLDVALAEGEFDAVDRIARRLPMQMLAQIMG VPQEDGPWLVEKGDALISNSDPDYTDFVVDQVDTEAYRMLPFRSPAAVELFDYANGLLDRMDAGEQIGVLNLVREPTSTG TRMSRDEFRNFFCLLVAAGNDTTRYSISATIHALANNPHLLQALKDGDFTSWEAAADEMIRYASPTTHFRRTATRDFTFH DRHVKAGDKVLLWFISGNRDETAILDPYTINLRRERNPFLSFGQGGPHICLGMWLAKLEVAIVMQELAKRLSSIEQVAEH SYLRSNFIHGIKHLPVRIVAR
Sequences:
>Translated_421_residues MQFPFSRSTNPNVDLSSLDAFNEGAPFATFDRMRREDPMAWSEMVNGDRGFWSVTRHADLLELNRQADLLSSAKGIRMED QTEEEYEARKTFQETDAPHHRGFRALVSKAFSKGTVAGFEDQIRKIVTDLLDVALAEGEFDAVDRIARRLPMQMLAQIMG VPQEDGPWLVEKGDALISNSDPDYTDFVVDQVDTEAYRMLPFRSPAAVELFDYANGLLDRMDAGEQIGVLNLVREPTSTG TRMSRDEFRNFFCLLVAAGNDTTRYSISATIHALANNPHLLQALKDGDFTSWEAAADEMIRYASPTTHFRRTATRDFTFH DRHVKAGDKVLLWFISGNRDETAILDPYTINLRRERNPFLSFGQGGPHICLGMWLAKLEVAIVMQELAKRLSSIEQVAEH SYLRSNFIHGIKHLPVRIVAR >Mature_421_residues MQFPFSRSTNPNVDLSSLDAFNEGAPFATFDRMRREDPMAWSEMVNGDRGFWSVTRHADLLELNRQADLLSSAKGIRMED QTEEEYEARKTFQETDAPHHRGFRALVSKAFSKGTVAGFEDQIRKIVTDLLDVALAEGEFDAVDRIARRLPMQMLAQIMG VPQEDGPWLVEKGDALISNSDPDYTDFVVDQVDTEAYRMLPFRSPAAVELFDYANGLLDRMDAGEQIGVLNLVREPTSTG TRMSRDEFRNFFCLLVAAGNDTTRYSISATIHALANNPHLLQALKDGDFTSWEAAADEMIRYASPTTHFRRTATRDFTFH DRHVKAGDKVLLWFISGNRDETAILDPYTINLRRERNPFLSFGQGGPHICLGMWLAKLEVAIVMQELAKRLSSIEQVAEH SYLRSNFIHGIKHLPVRIVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 47695; Mature: 47695
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFPFSRSTNPNVDLSSLDAFNEGAPFATFDRMRREDPMAWSEMVNGDRGFWSVTRHADL CCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCEEHHHCHHH LELNRQADLLSSAKGIRMEDQTEEEYEARKTFQETDAPHHRGFRALVSKAFSKGTVAGFE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH DQIRKIVTDLLDVALAEGEFDAVDRIARRLPMQMLAQIMGVPQEDGPWLVEKGDALISNS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEECCCEEECCC DPDYTDFVVDQVDTEAYRMLPFRSPAAVELFDYANGLLDRMDAGEQIGVLNLVREPTSTG CCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC TRMSRDEFRNFFCLLVAAGNDTTRYSISATIHALANNPHLLQALKDGDFTSWEAAADEMI CCCCHHHHCCEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHH RYASPTTHFRRTATRDFTFHDRHVKAGDKVLLWFISGNRDETAILDPYTINLRRERNPFL HHCCCCHHHHHHHCCCCEECCCEECCCCEEEEEEEECCCCCEEEECCEEEEEEECCCCCE SFGQGGPHICLGMWLAKLEVAIVMQELAKRLSSIEQVAEHSYLRSNFIHGIKHLPVRIVA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC R C >Mature Secondary Structure MQFPFSRSTNPNVDLSSLDAFNEGAPFATFDRMRREDPMAWSEMVNGDRGFWSVTRHADL CCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCEEHHHCHHH LELNRQADLLSSAKGIRMEDQTEEEYEARKTFQETDAPHHRGFRALVSKAFSKGTVAGFE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH DQIRKIVTDLLDVALAEGEFDAVDRIARRLPMQMLAQIMGVPQEDGPWLVEKGDALISNS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEECCCEEECCC DPDYTDFVVDQVDTEAYRMLPFRSPAAVELFDYANGLLDRMDAGEQIGVLNLVREPTSTG CCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC TRMSRDEFRNFFCLLVAAGNDTTRYSISATIHALANNPHLLQALKDGDFTSWEAAADEMI CCCCHHHHCCEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHH RYASPTTHFRRTATRDFTFHDRHVKAGDKVLLWFISGNRDETAILDPYTINLRRERNPFL HHCCCCHHHHHHHCCCCEECCCEECCCCEEEEEEEECCCCCEEEECCEEEEEEECCCCCE SFGQGGPHICLGMWLAKLEVAIVMQELAKRLSSIEQVAEHSYLRSNFIHGIKHLPVRIVA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]