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The map label for this gene is yhiX [C]

Identifier: 87200618

GI number: 87200618

Start: 2816589

End: 2817617

Strand: Direct

Name: yhiX [C]

Synonym: Saro_2605

Alternate gene names: 87200618

Gene position: 2816589-2817617 (Clockwise)

Preceding gene: 87200613

Following gene: 87200619

Centisome position: 79.08

GC content: 66.67

Gene sequence:

>1029_bases
ATGTCGCGAGCGACTGTGCGTACGGCTGCGCTTGATGGCTGGGACGGAATCCTGGCCGGAAGGACCACCACTGCCCTTGC
CATTCCGGAACGTCCGGCGCCTTGCGCAAATCCGTGCGAGGCGACGATCATGGCTCCGGCTTCATCCATGCCGCTTGCCG
AATTCGTCCGCTTTTCCGAAGATGTCGTGCGCGAAACCCGCGATGTCGCCATTCCGTGGCTCGCCGGCGTGCACTATGAT
CTGGCGTCGCTCGGCCCCATCGGGTCAGCCGTCAATTCGGCCGGGAAGGTCGGCACGGCGCTGCGGCGGCTGGTCGATTA
CTTCGCGCTCCTGCAGGACTGCACCGATATCCGGCTGGAGCGCGAGGACGACATGGCCTCGGTCAGCTACCGCATCCTCG
ATCCCGACATCTGGCCGCGCCACCACGACGCGATGTTCTCGCTCGGCATCATCGGCCAGATCATCCGGCGCGGAACGCGC
GGGGCCTGGGACAAGATCGAGTTCGCATTCGAGGCGGAAAGCCACGAGATGCGCGGCGACATCGGCAAGGTCCTGCGTGC
GCCCTGCACGTTCGGCGCCGATTCCAACCAGATCCGCTTTCCCGCCCAGATGCTGGACCTGGCGCTGCCGCAGGTCCAGG
GGCCGGATGCCGATATCAGGGGCCTTTCGGGCGAGATTGTGGCGCAGCGCCGCCGCACGCCGCTGGTCGAACGGCTGGCA
CAGGTCGTGTTCCGCGATCTCAACACCCATGCCATCGAACAGGAACGGATCGCGCGCGAGATCGGCATGTCGAGCCGCAC
CATGCGCCGCAAGCTCGCCGAGGAAGGCAGCTCGTTCCAGCAGGTGCTGGACGAATGCCGGATGCGGCAGGCGGTGTTCG
AGTTCCGCACCCGCCCCGACCTTTCGATCGCCCAGATCGCCCTGCGGCTCGGCTATGCCGAACACAGCAACTTCACCCGC
GCGTTCCACCGCTGGAGCGGCATCTCGCCCCACGCCTGGCGGGCACGGCTGAACCAGACCGCGCACTGA

Upstream 100 bases:

>100_bases
ATCAATTCTTGATGTTTTCGATCAATAACTGCTTCCGGCGAATCGATAGGCTCCTTCCACAACGAGAATGCCACCCAAGT
GGCGACCGGGGAGATTTACT

Downstream 100 bases:

>100_bases
AACCCCAAGACAAGTCACTATCCAAGGCCGATCCCATGACCCGATTGCTGCTGCTCGAAGGAAACACCGCCGACAAGCGC
GCCAGGGGGCGCGAACTGGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSRATVRTAALDGWDGILAGRTTTALAIPERPAPCANPCEATIMAPASSMPLAEFVRFSEDVVRETRDVAIPWLAGVHYD
LASLGPIGSAVNSAGKVGTALRRLVDYFALLQDCTDIRLEREDDMASVSYRILDPDIWPRHHDAMFSLGIIGQIIRRGTR
GAWDKIEFAFEAESHEMRGDIGKVLRAPCTFGADSNQIRFPAQMLDLALPQVQGPDADIRGLSGEIVAQRRRTPLVERLA
QVVFRDLNTHAIEQERIAREIGMSSRTMRRKLAEEGSSFQQVLDECRMRQAVFEFRTRPDLSIAQIALRLGYAEHSNFTR
AFHRWSGISPHAWRARLNQTAH

Sequences:

>Translated_342_residues
MSRATVRTAALDGWDGILAGRTTTALAIPERPAPCANPCEATIMAPASSMPLAEFVRFSEDVVRETRDVAIPWLAGVHYD
LASLGPIGSAVNSAGKVGTALRRLVDYFALLQDCTDIRLEREDDMASVSYRILDPDIWPRHHDAMFSLGIIGQIIRRGTR
GAWDKIEFAFEAESHEMRGDIGKVLRAPCTFGADSNQIRFPAQMLDLALPQVQGPDADIRGLSGEIVAQRRRTPLVERLA
QVVFRDLNTHAIEQERIAREIGMSSRTMRRKLAEEGSSFQQVLDECRMRQAVFEFRTRPDLSIAQIALRLGYAEHSNFTR
AFHRWSGISPHAWRARLNQTAH
>Mature_341_residues
SRATVRTAALDGWDGILAGRTTTALAIPERPAPCANPCEATIMAPASSMPLAEFVRFSEDVVRETRDVAIPWLAGVHYDL
ASLGPIGSAVNSAGKVGTALRRLVDYFALLQDCTDIRLEREDDMASVSYRILDPDIWPRHHDAMFSLGIIGQIIRRGTRG
AWDKIEFAFEAESHEMRGDIGKVLRAPCTFGADSNQIRFPAQMLDLALPQVQGPDADIRGLSGEIVAQRRRTPLVERLAQ
VVFRDLNTHAIEQERIAREIGMSSRTMRRKLAEEGSSFQQVLDECRMRQAVFEFRTRPDLSIAQIALRLGYAEHSNFTRA
FHRWSGISPHAWRARLNQTAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38231; Mature: 38100

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRATVRTAALDGWDGILAGRTTTALAIPERPAPCANPCEATIMAPASSMPLAEFVRFSE
CCCCCEEHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
DVVRETRDVAIPWLAGVHYDLASLGPIGSAVNSAGKVGTALRRLVDYFALLQDCTDIRLE
HHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
REDDMASVSYRILDPDIWPRHHDAMFSLGIIGQIIRRGTRGAWDKIEFAFEAESHEMRGD
CCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCHHHHHH
IGKVLRAPCTFGADSNQIRFPAQMLDLALPQVQGPDADIRGLSGEIVAQRRRTPLVERLA
HHHHHHCCCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH
QVVFRDLNTHAIEQERIAREIGMSSRTMRRKLAEEGSSFQQVLDECRMRQAVFEFRTRPD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
LSIAQIALRLGYAEHSNFTRAFHRWSGISPHAWRARLNQTAH
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SRATVRTAALDGWDGILAGRTTTALAIPERPAPCANPCEATIMAPASSMPLAEFVRFSE
CCCCEEHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
DVVRETRDVAIPWLAGVHYDLASLGPIGSAVNSAGKVGTALRRLVDYFALLQDCTDIRLE
HHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
REDDMASVSYRILDPDIWPRHHDAMFSLGIIGQIIRRGTRGAWDKIEFAFEAESHEMRGD
CCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCHHHHHH
IGKVLRAPCTFGADSNQIRFPAQMLDLALPQVQGPDADIRGLSGEIVAQRRRTPLVERLA
HHHHHHCCCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH
QVVFRDLNTHAIEQERIAREIGMSSRTMRRKLAEEGSSFQQVLDECRMRQAVFEFRTRPD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
LSIAQIALRLGYAEHSNFTRAFHRWSGISPHAWRARLNQTAH
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]