| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200596
Identifier: 87200596
GI number: 87200596
Start: 2788082
End: 2788993
Strand: Reverse
Name: 87200596
Synonym: Saro_2583
Alternate gene names: NA
Gene position: 2788993-2788082 (Counterclockwise)
Preceding gene: 87200598
Following gene: 87200595
Centisome position: 78.31
GC content: 66.34
Gene sequence:
>912_bases ATGGCTACCGCTGCCGTCACGGACGACATCGAGGAAGGCGCGCGCAAGGCGCCGGCACTGATCCGCTATCTTGCCGAGGG CGAATACGTCACGCGCCGCTATGTCTCGCAGGGCGCCGAGATGAACACCGGCGAATATGCCGACTACGAATGCGTCGTGC GTGACGGAATGCCGATCCGCGATCACTTCACGCTCGACGTGCACGGCTTCGCGCTGGGACGGCATCGTTCGGCAGTGGCG GACTTCCACGACAAGCCGACGGTGGATGCGCTCTACCTCGACGAAGTGGAGGAACTGGTCACGCGACTGTGCGGCGCGGC CAGGACGGCGGCGCAGGGCTGGATGATCCGCACCTCGGCCGACCTTACCGAACGCGCCAAGCAAAAGGTGCAGGGCTATC AGCATAGCGGCGGCATCCAGCCCCCCGCCGGCGAAGCCCACGTCGACTACAACGAAGTGACCGGCCGCCGCGCCGCCGCC CGCGTCTATGCCGACCGCTTTCCCGACGGGCCCGGCTACAAGCGCTACATCTGCTTCTCGTTGTGGCGCACCTTCTCGCC GGGTCCTCAGGACTGGCCGCTGGCAGTGTGCGACGGCCGAACGGTGCGCGATGAGGAAACCGCGTCCAACACCCTGTTCG TGGTGGACGAGTTTCCCGTCGGCGACGCCCTGACCGCGCCGGTCGAGGGCGAGGACCAGATGATCGCCGCGACCATCTTC CGGCACCGCGACAGGCATCGCTGGTGGTACTTCTCGAACATGGCGGCGGACGACGTGCTGCTGTTCAAGTTCCAGGACAG CGACCATTCGGTGACGTGGCGCTGCCCGCACACGGCGTTCCACGACACCAGCCTGCCCGACGCGAAAACCCGCTCGAGCA TCGAGGTGCGCTGCATCGCCTTCTTCGAATAG
Upstream 100 bases:
>100_bases GTGCATGCTCCGGTGGAGTGGCGGGCACGCTTGCGCGTCTTACACAAATGTGTAAATCTTCGTTCAAGGCGGCCGGCATG GCCGCACGGGAGAGAGACGC
Downstream 100 bases:
>100_bases GAATTCGGCGGGAAGATTGTTGACGCGCGCCGCGTTTGACGACAGGCAGGCGCGATGATCGATCCCCGCCATTTCCGCAA CGTGCTGGGCGCCTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MATAAVTDDIEEGARKAPALIRYLAEGEYVTRRYVSQGAEMNTGEYADYECVVRDGMPIRDHFTLDVHGFALGRHRSAVA DFHDKPTVDALYLDEVEELVTRLCGAARTAAQGWMIRTSADLTERAKQKVQGYQHSGGIQPPAGEAHVDYNEVTGRRAAA RVYADRFPDGPGYKRYICFSLWRTFSPGPQDWPLAVCDGRTVRDEETASNTLFVVDEFPVGDALTAPVEGEDQMIAATIF RHRDRHRWWYFSNMAADDVLLFKFQDSDHSVTWRCPHTAFHDTSLPDAKTRSSIEVRCIAFFE
Sequences:
>Translated_303_residues MATAAVTDDIEEGARKAPALIRYLAEGEYVTRRYVSQGAEMNTGEYADYECVVRDGMPIRDHFTLDVHGFALGRHRSAVA DFHDKPTVDALYLDEVEELVTRLCGAARTAAQGWMIRTSADLTERAKQKVQGYQHSGGIQPPAGEAHVDYNEVTGRRAAA RVYADRFPDGPGYKRYICFSLWRTFSPGPQDWPLAVCDGRTVRDEETASNTLFVVDEFPVGDALTAPVEGEDQMIAATIF RHRDRHRWWYFSNMAADDVLLFKFQDSDHSVTWRCPHTAFHDTSLPDAKTRSSIEVRCIAFFE >Mature_302_residues ATAAVTDDIEEGARKAPALIRYLAEGEYVTRRYVSQGAEMNTGEYADYECVVRDGMPIRDHFTLDVHGFALGRHRSAVAD FHDKPTVDALYLDEVEELVTRLCGAARTAAQGWMIRTSADLTERAKQKVQGYQHSGGIQPPAGEAHVDYNEVTGRRAAAR VYADRFPDGPGYKRYICFSLWRTFSPGPQDWPLAVCDGRTVRDEETASNTLFVVDEFPVGDALTAPVEGEDQMIAATIFR HRDRHRWWYFSNMAADDVLLFKFQDSDHSVTWRCPHTAFHDTSLPDAKTRSSIEVRCIAFFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34166; Mature: 34035
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAAVTDDIEEGARKAPALIRYLAEGEYVTRRYVSQGAEMNTGEYADYECVVRDGMPIR CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC DHFTLDVHGFALGRHRSAVADFHDKPTVDALYLDEVEELVTRLCGAARTAAQGWMIRTSA CEEEEEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC DLTERAKQKVQGYQHSGGIQPPAGEAHVDYNEVTGRRAAARVYADRFPDGPGYKRYICFS HHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHH LWRTFSPGPQDWPLAVCDGRTVRDEETASNTLFVVDEFPVGDALTAPVEGEDQMIAATIF HHHHCCCCCCCCCEEEECCCEECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCHHHHHH RHRDRHRWWYFSNMAADDVLLFKFQDSDHSVTWRCPHTAFHDTSLPDAKTRSSIEVRCIA HHCCCCCEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE FFE EEC >Mature Secondary Structure ATAAVTDDIEEGARKAPALIRYLAEGEYVTRRYVSQGAEMNTGEYADYECVVRDGMPIR CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC DHFTLDVHGFALGRHRSAVADFHDKPTVDALYLDEVEELVTRLCGAARTAAQGWMIRTSA CEEEEEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC DLTERAKQKVQGYQHSGGIQPPAGEAHVDYNEVTGRRAAARVYADRFPDGPGYKRYICFS HHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHH LWRTFSPGPQDWPLAVCDGRTVRDEETASNTLFVVDEFPVGDALTAPVEGEDQMIAATIF HHHHCCCCCCCCCEEEECCCEECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCHHHHHH RHRDRHRWWYFSNMAADDVLLFKFQDSDHSVTWRCPHTAFHDTSLPDAKTRSSIEVRCIA HHCCCCCEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE FFE EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA