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The map label for this gene is bbsG [H]

Identifier: 87200524

GI number: 87200524

Start: 2715476

End: 2716702

Strand: Direct

Name: bbsG [H]

Synonym: Saro_2511

Alternate gene names: 87200524

Gene position: 2715476-2716702 (Clockwise)

Preceding gene: 87200523

Following gene: 87200525

Centisome position: 76.24

GC content: 64.3

Gene sequence:

>1227_bases
ATGCAGTTCGAACACTCCGACAAGGTCAAGAACCTCCTCGCCCGCCTCGAAGCCTTCATGGACGAGCACATCTACCCGGT
CGAACAGGCCTACTATGATTTCGTCCATGATCAGCAGAACCTCTGGGCCGAATGGCCGGGGATGGAACCGCTCAAGGAAA
AGGCGCGCGCAGCAGGCCTGTGGAACCTGTTCCTGCCGCACGAGTACGGCGCATGGTCACCCGGCCTCACCAACCTCGAA
TATGCCCCGCTGGCCGAAGTCATGGGCCGGGTGCCGTGGTCCAGCCAGGTGTTCAACTGCTCCGCGCCCGATACCGGCAA
CATGGAAGTGCTGGCCAAGTTCGGCAGCCCCGAACAGCAGGAACTCTGGCTGAAGCCGCTCCTCGCCGGGGAAATCCGCT
CCGCCTACGTGATGACCGAACCGCAGGTCGCCTCCTCGGATGCAACCAATCTCGAACTCTCGATCATCCCTGATGGCGAC
GAATACGTGATAAACGGTCGCAAGTGGTGGATCTCGAACGCGATGCACCCGCGCTGCGAGATCATGATCGTCATGGGCAA
GACCTTCTTCGAAGGGCCGCGCCACAGCCAGCACTCGCAGATCCTCGTTCCCCGCGATACGCCGGGCGTCACCGTGGTGC
GCCACCTCAAGGTCTTCGGCTCCAGCAATTCTCCCGGCGGTGAAGTGGAACTGCGCTTCGACAACGTCCGCGTGCCGAAG
CAGAACATGATCCTTGGAGAAGGTCGCGGCTTCGAGATCGCGCAGGGGCGCCTCGGGCCGGGCCGTATCCACCACTGCAT
GCGCTCGATCGGCCAGGCCCAGCGCGCACTCGAATGGATGGCCCGCCGCGCCGATTCCCGCGTCGCATTCGGCAAGAAGC
TCGCCGATCAGTCGAGCGTCCGGCAGGACGTCGCCCGCTCGTTCTGCGAGGTGGAGATGGCGCGCCTGCTGACCCTCAAG
GCCGCCGACGCCATGGATCGTCTCGGCAACAAGGCCGCGCGCGACCTCATCGCCGCGATCAAGGTCGTCGCCCCGTCGAT
GGCCCAGCAGGTGGCCGACCGCGCGATCCAGGTCCACGGCGGCATGGGCGTCAGCGAGGATGGCCCGATGGCCTACTTCT
TCACGCTCAACCGCTACGTCCGCCTCACCGATGGGCCGGAGGAAGTGCACATGAGCCAGCTCGGCAAGATCAAGATCGCC
GAATACGTCGCCTCCAACGCACGCTGA

Upstream 100 bases:

>100_bases
TGGCCGGCGCCGCGATCTTCCTTGCCTCCCCGCTCGCCTCCTACGTCACCGGCCATACACTCGTGGTCGATGGCGGCCTC
TCGCTCTGAAAGCCTGTACC

Downstream 100 bases:

>100_bases
AGGAACATCGCATGAAGGCCCTGCGCTACTACGGTGCCCGCGACATCCGCCATGAATCGATGGATGATCCGACGCCGCAA
TCGGACCGCGACGCAATCGT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MQFEHSDKVKNLLARLEAFMDEHIYPVEQAYYDFVHDQQNLWAEWPGMEPLKEKARAAGLWNLFLPHEYGAWSPGLTNLE
YAPLAEVMGRVPWSSQVFNCSAPDTGNMEVLAKFGSPEQQELWLKPLLAGEIRSAYVMTEPQVASSDATNLELSIIPDGD
EYVINGRKWWISNAMHPRCEIMIVMGKTFFEGPRHSQHSQILVPRDTPGVTVVRHLKVFGSSNSPGGEVELRFDNVRVPK
QNMILGEGRGFEIAQGRLGPGRIHHCMRSIGQAQRALEWMARRADSRVAFGKKLADQSSVRQDVARSFCEVEMARLLTLK
AADAMDRLGNKAARDLIAAIKVVAPSMAQQVADRAIQVHGGMGVSEDGPMAYFFTLNRYVRLTDGPEEVHMSQLGKIKIA
EYVASNAR

Sequences:

>Translated_408_residues
MQFEHSDKVKNLLARLEAFMDEHIYPVEQAYYDFVHDQQNLWAEWPGMEPLKEKARAAGLWNLFLPHEYGAWSPGLTNLE
YAPLAEVMGRVPWSSQVFNCSAPDTGNMEVLAKFGSPEQQELWLKPLLAGEIRSAYVMTEPQVASSDATNLELSIIPDGD
EYVINGRKWWISNAMHPRCEIMIVMGKTFFEGPRHSQHSQILVPRDTPGVTVVRHLKVFGSSNSPGGEVELRFDNVRVPK
QNMILGEGRGFEIAQGRLGPGRIHHCMRSIGQAQRALEWMARRADSRVAFGKKLADQSSVRQDVARSFCEVEMARLLTLK
AADAMDRLGNKAARDLIAAIKVVAPSMAQQVADRAIQVHGGMGVSEDGPMAYFFTLNRYVRLTDGPEEVHMSQLGKIKIA
EYVASNAR
>Mature_408_residues
MQFEHSDKVKNLLARLEAFMDEHIYPVEQAYYDFVHDQQNLWAEWPGMEPLKEKARAAGLWNLFLPHEYGAWSPGLTNLE
YAPLAEVMGRVPWSSQVFNCSAPDTGNMEVLAKFGSPEQQELWLKPLLAGEIRSAYVMTEPQVASSDATNLELSIIPDGD
EYVINGRKWWISNAMHPRCEIMIVMGKTFFEGPRHSQHSQILVPRDTPGVTVVRHLKVFGSSNSPGGEVELRFDNVRVPK
QNMILGEGRGFEIAQGRLGPGRIHHCMRSIGQAQRALEWMARRADSRVAFGKKLADQSSVRQDVARSFCEVEMARLLTLK
AADAMDRLGNKAARDLIAAIKVVAPSMAQQVADRAIQVHGGMGVSEDGPMAYFFTLNRYVRLTDGPEEVHMSQLGKIKIA
EYVASNAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=407, Percent_Identity=54.0540540540541, Blast_Score=429, Evalue=1e-120,
Organism=Homo sapiens, GI48976061, Length=407, Percent_Identity=54.0540540540541, Blast_Score=429, Evalue=1e-120,
Organism=Homo sapiens, GI38505218, Length=402, Percent_Identity=50.7462686567164, Blast_Score=401, Evalue=1e-112,
Organism=Homo sapiens, GI4557233, Length=386, Percent_Identity=30.3108808290155, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI4557231, Length=411, Percent_Identity=26.2773722627737, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI187960098, Length=409, Percent_Identity=26.4058679706601, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4501859, Length=352, Percent_Identity=29.8295454545455, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI21361497, Length=379, Percent_Identity=27.1767810026385, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI226958412, Length=400, Percent_Identity=26.25, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI7656849, Length=378, Percent_Identity=28.042328042328, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI226958414, Length=383, Percent_Identity=25.8485639686684, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4557235, Length=396, Percent_Identity=28.030303030303, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI76496475, Length=396, Percent_Identity=28.030303030303, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI4501857, Length=311, Percent_Identity=26.3665594855305, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4503943, Length=336, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI87081958, Length=316, Percent_Identity=26.5822784810127, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786223, Length=345, Percent_Identity=24.9275362318841, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17562446, Length=358, Percent_Identity=53.6312849162011, Blast_Score=392, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI17534899, Length=403, Percent_Identity=27.5434243176179, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17569725, Length=344, Percent_Identity=29.0697674418605, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17538396, Length=402, Percent_Identity=27.363184079602, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71985184, Length=337, Percent_Identity=29.080118694362, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=345, Percent_Identity=27.2463768115942, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=394, Percent_Identity=25.8883248730964, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=400, Percent_Identity=25, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=339, Percent_Identity=26.8436578171091, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=343, Percent_Identity=27.1137026239067, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=270, Percent_Identity=31.1111111111111, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=275, Percent_Identity=27.6363636363636, Blast_Score=95, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=385, Percent_Identity=26.2337662337662, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=27.4678111587983, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71982178, Length=187, Percent_Identity=28.8770053475936, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21356377, Length=349, Percent_Identity=29.512893982808, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646207, Length=357, Percent_Identity=29.1316526610644, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI281363737, Length=340, Percent_Identity=29.1176470588235, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24666513, Length=299, Percent_Identity=30.7692307692308, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24660351, Length=383, Percent_Identity=28.4595300261097, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21355753, Length=400, Percent_Identity=24.75, Blast_Score=97, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 45692; Mature: 45692

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFEHSDKVKNLLARLEAFMDEHIYPVEQAYYDFVHDQQNLWAEWPGMEPLKEKARAAGL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCE
WNLFLPHEYGAWSPGLTNLEYAPLAEVMGRVPWSSQVFNCSAPDTGNMEVLAKFGSPEQQ
EEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCCEEEEECCCCHHH
ELWLKPLLAGEIRSAYVMTEPQVASSDATNLELSIIPDGDEYVINGRKWWISNAMHPRCE
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEECCCCCEEECCEEEEECCCCCCCEE
IMIVMGKTFFEGPRHSQHSQILVPRDTPGVTVVRHLKVFGSSNSPGGEVELRFDNVRVPK
EEEEECCHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEECCH
QNMILGEGRGFEIAQGRLGPGRIHHCMRSIGQAQRALEWMARRADSRVAFGKKLADQSSV
HCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RQDVARSFCEVEMARLLTLKAADAMDRLGNKAARDLIAAIKVVAPSMAQQVADRAIQVHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
GMGVSEDGPMAYFFTLNRYVRLTDGPEEVHMSQLGKIKIAEYVASNAR
CCCCCCCCCEEEEEEECCEEEECCCHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MQFEHSDKVKNLLARLEAFMDEHIYPVEQAYYDFVHDQQNLWAEWPGMEPLKEKARAAGL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCE
WNLFLPHEYGAWSPGLTNLEYAPLAEVMGRVPWSSQVFNCSAPDTGNMEVLAKFGSPEQQ
EEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCCEEEEECCCCHHH
ELWLKPLLAGEIRSAYVMTEPQVASSDATNLELSIIPDGDEYVINGRKWWISNAMHPRCE
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEECCCCCEEECCEEEEECCCCCCCEE
IMIVMGKTFFEGPRHSQHSQILVPRDTPGVTVVRHLKVFGSSNSPGGEVELRFDNVRVPK
EEEEECCHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEECCH
QNMILGEGRGFEIAQGRLGPGRIHHCMRSIGQAQRALEWMARRADSRVAFGKKLADQSSV
HCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RQDVARSFCEVEMARLLTLKAADAMDRLGNKAARDLIAAIKVVAPSMAQQVADRAIQVHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
GMGVSEDGPMAYFFTLNRYVRLTDGPEEVHMSQLGKIKIAEYVASNAR
CCCCCCCCCEEEEEEECCEEEECCCHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]