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The map label for this gene is yadH [H]

Identifier: 87200492

GI number: 87200492

Start: 2680366

End: 2681244

Strand: Reverse

Name: yadH [H]

Synonym: Saro_2479

Alternate gene names: 87200492

Gene position: 2681244-2680366 (Counterclockwise)

Preceding gene: 87200495

Following gene: 87200489

Centisome position: 75.28

GC content: 61.89

Gene sequence:

>879_bases
ATGGCCGATCAACCGCTGCCCCGAGAAGGGGCCACAACCCGCAACGCCGGAACCTTCACCCCGCCTGGACAGCCGGTATT
CCACGGCTTCAACAGGTTGGGTCTGTGGACCCTTTATATGAAGGAAGTCCGCCGTTTCTTCAAGGTCCAGACCCAGACGA
TCTGGGCTCCGGCCGTGACAACGCTGCTGTACCTGATGATCTTCACGCTTGCCCTCGGCGGCGGCGCGAACGGTGCGCGG
CAGGTGCTGGGTGTGAACTTCGCAAGCTTCGTTGCACCCGGGCTGATCGCAATGGGCATGATCAACAACGCTTTCGCCAA
CTCGAGCTTCAGCCTTCTGGGCGGGAAGATCCAGGGAACGATCGTGGATTACCTGATGCCGCCGATCAGCGTGGGCGAAC
TCATGGCGGCGCTGGTAGGGGCCGCGGTGACGCGTGCGGTACTTGTGGGGTTTGCGGTCTCGGCCGCGATGTTGCTGTGG
CCTGGTGTGAGTCTTGCCGTGGCGCACCCGTGGGCGGTGGTCTGGTTCGGGCTCATGGGATCGATCCTGTTGGCGCTGAT
CGGAGTGCTAACGTCGATCTGGGCGGAGAAGTTCGATCACAACGCCGCCGTGACCAATTTCGTCATCACCCCCCTGTCGA
TGCTTTCCGGCACGTTCTATGTGATCGACAACCTCGCTCCTGCGTTCCAGGCGGTCAGCCGGATGAACCCGATTTTCTAC
GTGATCTCGGGCTTCCGGTTCGGCTTTCTCGGGCAGAGCGACATTGGCGATACGAACACCGCAGTCCTGCACGGTGCGAT
CGGGCTGGGGGTGCTCAACCTTGCCATCGCCGCGCTGCTTTACGCCGTGCTGCGTTCCGGGTGGAAGCTGAAGAACTGA

Upstream 100 bases:

>100_bases
TTCATGCGACCGGTCGGGCCGGCCATCAAAATGCCTGTCCGGCACCGCCGGGTCGGCCAAAATCTTGCCATCGGCGCAGC
CGCGCGATACCGCGACGGAC

Downstream 100 bases:

>100_bases
AACGCCCGGAAATGCCGCGGCTTGTCAGTGCGACAGGCTGCGGCGCAGGCGATAGCGGCCGTTGCGGAAGCCTTCGAACA
TCTCGTCCAGCGAGGGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MADQPLPREGATTRNAGTFTPPGQPVFHGFNRLGLWTLYMKEVRRFFKVQTQTIWAPAVTTLLYLMIFTLALGGGANGAR
QVLGVNFASFVAPGLIAMGMINNAFANSSFSLLGGKIQGTIVDYLMPPISVGELMAALVGAAVTRAVLVGFAVSAAMLLW
PGVSLAVAHPWAVVWFGLMGSILLALIGVLTSIWAEKFDHNAAVTNFVITPLSMLSGTFYVIDNLAPAFQAVSRMNPIFY
VISGFRFGFLGQSDIGDTNTAVLHGAIGLGVLNLAIAALLYAVLRSGWKLKN

Sequences:

>Translated_292_residues
MADQPLPREGATTRNAGTFTPPGQPVFHGFNRLGLWTLYMKEVRRFFKVQTQTIWAPAVTTLLYLMIFTLALGGGANGAR
QVLGVNFASFVAPGLIAMGMINNAFANSSFSLLGGKIQGTIVDYLMPPISVGELMAALVGAAVTRAVLVGFAVSAAMLLW
PGVSLAVAHPWAVVWFGLMGSILLALIGVLTSIWAEKFDHNAAVTNFVITPLSMLSGTFYVIDNLAPAFQAVSRMNPIFY
VISGFRFGFLGQSDIGDTNTAVLHGAIGLGVLNLAIAALLYAVLRSGWKLKN
>Mature_291_residues
ADQPLPREGATTRNAGTFTPPGQPVFHGFNRLGLWTLYMKEVRRFFKVQTQTIWAPAVTTLLYLMIFTLALGGGANGARQ
VLGVNFASFVAPGLIAMGMINNAFANSSFSLLGGKIQGTIVDYLMPPISVGELMAALVGAAVTRAVLVGFAVSAAMLLWP
GVSLAVAHPWAVVWFGLMGSILLALIGVLTSIWAEKFDHNAAVTNFVITPLSMLSGTFYVIDNLAPAFQAVSRMNPIFYV
ISGFRFGFLGQSDIGDTNTAVLHGAIGLGVLNLAIAALLYAVLRSGWKLKN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=231, Percent_Identity=36.7965367965368, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 31068; Mature: 30937

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQPLPREGATTRNAGTFTPPGQPVFHGFNRLGLWTLYMKEVRRFFKVQTQTIWAPAVT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLYLMIFTLALGGGANGARQVLGVNFASFVAPGLIAMGMINNAFANSSFSLLGGKIQGT
HHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
IVDYLMPPISVGELMAALVGAAVTRAVLVGFAVSAAMLLWPGVSLAVAHPWAVVWFGLMG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SILLALIGVLTSIWAEKFDHNAAVTNFVITPLSMLSGTFYVIDNLAPAFQAVSRMNPIFY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEE
VISGFRFGFLGQSDIGDTNTAVLHGAIGLGVLNLAIAALLYAVLRSGWKLKN
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADQPLPREGATTRNAGTFTPPGQPVFHGFNRLGLWTLYMKEVRRFFKVQTQTIWAPAVT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLYLMIFTLALGGGANGARQVLGVNFASFVAPGLIAMGMINNAFANSSFSLLGGKIQGT
HHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
IVDYLMPPISVGELMAALVGAAVTRAVLVGFAVSAAMLLWPGVSLAVAHPWAVVWFGLMG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SILLALIGVLTSIWAEKFDHNAAVTNFVITPLSMLSGTFYVIDNLAPAFQAVSRMNPIFY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEE
VISGFRFGFLGQSDIGDTNTAVLHGAIGLGVLNLAIAALLYAVLRSGWKLKN
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]