Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200472

Identifier: 87200472

GI number: 87200472

Start: 2652414

End: 2653736

Strand: Reverse

Name: 87200472

Synonym: Saro_2459

Alternate gene names: NA

Gene position: 2653736-2652414 (Counterclockwise)

Preceding gene: 87200473

Following gene: 87200471

Centisome position: 74.51

GC content: 65.08

Gene sequence:

>1323_bases
ATGAAGTACCCGCCGCTCCTCGCAATCGCGCTTGCCCTATCTGGCTGTGAGGGAAGGAACACGCCCGTTGACGCGGTGGA
CGACTTCGCACTGGGTATTCCGGTCCAACCTGCACCCGGCCCTTCGATCCAGCGTATCGACCTGCCGCTTTCGGCCATCC
TTGCACTGAAGCGCGAGGACATGGGCGATATCAGGGTGTTCGACCGTGCGAGCCGCCCCCTCTCCATCGCCCTTCAGGGC
GCGCGATTGGAAGAGCAAGCGCAGCGTTTTGCAGCGGTGCCCTTCGGAAGCACCGGTGCGGCAGCGTCTGGTGCCGGGGG
CACCGTTTCGGTCCAGGTGCGACAATCCGGCGGCACCGTGACCGTGGATACAGGAACCCCCACCGCGCCGGGAGGTGACG
AAGCGGTTCTTGTCGATACCCGCAAGGTTGCACAGCCAGCCGTGGCGCTTGTCCTGGATGCTGTGCTGCCTGCGCGCAAG
CCGGTGGAAGTGAGCGTTTCCGTGAGTGACGATCTCGGGACGTGGCAGCCACTCGCGGAACGGGTGCTCTTTTCTCCGGA
CGAGGGCGGCAGTGTTCTGGGCGGCGGGCGGATCGCCCTGTCTGGTGCGCTTCTGAAGGGCCGTTACCTGCGTATCGCGT
GGCTTCGGTCGACGGGGGCGCGGGTGTCCGGCGTGACGCTATATACTACCGCTATTCCACCTGCCCCGCGCATCGCGGTG
ACCACGCGTGGTCTGGCCCTCCAGGATTCGAGGACTGCCCCTTTCACGGTTCCGACAGCGGCATCCCCGGTGGCGGTAAC
GGTTTCTCTGACCGGGCGCGACGGCACTGTCCCGGTCCAGTTGCTGGGGCGGAAGATGCCCGAAGCTCCGTGGACGCCAT
TGGCGTTCGGGACCTTGCGGCAGGGCGGCTCGGCAACGACGCTCGAGGTGGGGGAGCCAGGAATCCGGCAGTTCATGTTG
AGGGCCGATGCCCGCAGCGCGGGCTTTTCCCGACCGCCGCGTATCGATCTGCAATTCGCCGGCATTGGATTGATTGCCGC
CTTCAACGCAAATGGCCCGTATCGGCTTGCCGTGGGGAACAAGGCGGCGGTGCCTTCCTTCCTTCAGGCGGGGGACTTGC
TTGTTCAAGGTGCCGCAATCCCTGTTGCCCGGCTCGACAATGGACCCACGCCGGCTCCGATGGATGTCGGACCGTCCAAG
GCACTCCCCTTCGGTCTTTCGCCGATGAAGCTTGCCTTGTGGGCCATCCTCCTTGTTGGCGTCGGCTTGCTTGCGCTTGC
GGCATTGCGCCTGCTGAAAGTCACCGCTTCTTCGGGTTCGTGA

Upstream 100 bases:

>100_bases
CACGGATCGTCGCCTTCATCGGCGTTGGCGTGCTGATGTTGCTGATCGGCTATTTCGTGCCTCTTCCGCCCCGTCGTGAA
GCGGGCAAGGAAGTGGCAGC

Downstream 100 bases:

>100_bases
AGCCCGCATCCCGGCGCGGAACCTGCCGCATGATTCCTCGCTTCCGGGCTTCCGCGCACGAAGTCTGGAGGAGCGAACTG
CATTTGGCAGGGCTTGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MKYPPLLAIALALSGCEGRNTPVDAVDDFALGIPVQPAPGPSIQRIDLPLSAILALKREDMGDIRVFDRASRPLSIALQG
ARLEEQAQRFAAVPFGSTGAAASGAGGTVSVQVRQSGGTVTVDTGTPTAPGGDEAVLVDTRKVAQPAVALVLDAVLPARK
PVEVSVSVSDDLGTWQPLAERVLFSPDEGGSVLGGGRIALSGALLKGRYLRIAWLRSTGARVSGVTLYTTAIPPAPRIAV
TTRGLALQDSRTAPFTVPTAASPVAVTVSLTGRDGTVPVQLLGRKMPEAPWTPLAFGTLRQGGSATTLEVGEPGIRQFML
RADARSAGFSRPPRIDLQFAGIGLIAAFNANGPYRLAVGNKAAVPSFLQAGDLLVQGAAIPVARLDNGPTPAPMDVGPSK
ALPFGLSPMKLALWAILLVGVGLLALAALRLLKVTASSGS

Sequences:

>Translated_440_residues
MKYPPLLAIALALSGCEGRNTPVDAVDDFALGIPVQPAPGPSIQRIDLPLSAILALKREDMGDIRVFDRASRPLSIALQG
ARLEEQAQRFAAVPFGSTGAAASGAGGTVSVQVRQSGGTVTVDTGTPTAPGGDEAVLVDTRKVAQPAVALVLDAVLPARK
PVEVSVSVSDDLGTWQPLAERVLFSPDEGGSVLGGGRIALSGALLKGRYLRIAWLRSTGARVSGVTLYTTAIPPAPRIAV
TTRGLALQDSRTAPFTVPTAASPVAVTVSLTGRDGTVPVQLLGRKMPEAPWTPLAFGTLRQGGSATTLEVGEPGIRQFML
RADARSAGFSRPPRIDLQFAGIGLIAAFNANGPYRLAVGNKAAVPSFLQAGDLLVQGAAIPVARLDNGPTPAPMDVGPSK
ALPFGLSPMKLALWAILLVGVGLLALAALRLLKVTASSGS
>Mature_440_residues
MKYPPLLAIALALSGCEGRNTPVDAVDDFALGIPVQPAPGPSIQRIDLPLSAILALKREDMGDIRVFDRASRPLSIALQG
ARLEEQAQRFAAVPFGSTGAAASGAGGTVSVQVRQSGGTVTVDTGTPTAPGGDEAVLVDTRKVAQPAVALVLDAVLPARK
PVEVSVSVSDDLGTWQPLAERVLFSPDEGGSVLGGGRIALSGALLKGRYLRIAWLRSTGARVSGVTLYTTAIPPAPRIAV
TTRGLALQDSRTAPFTVPTAASPVAVTVSLTGRDGTVPVQLLGRKMPEAPWTPLAFGTLRQGGSATTLEVGEPGIRQFML
RADARSAGFSRPPRIDLQFAGIGLIAAFNANGPYRLAVGNKAAVPSFLQAGDLLVQGAAIPVARLDNGPTPAPMDVGPSK
ALPFGLSPMKLALWAILLVGVGLLALAALRLLKVTASSGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45161; Mature: 45161

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYPPLLAIALALSGCEGRNTPVDAVDDFALGIPVQPAPGPSIQRIDLPLSAILALKRED
CCCCHHHHEEHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHHHHHCCC
MGDIRVFDRASRPLSIALQGARLEEQAQRFAAVPFGSTGAAASGAGGTVSVQVRQSGGTV
CCCEEEEECCCCCEEEEEECCCHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCEE
TVDTGTPTAPGGDEAVLVDTRKVAQPAVALVLDAVLPARKPVEVSVSVSDDLGTWQPLAE
EECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHH
RVLFSPDEGGSVLGGGRIALSGALLKGRYLRIAWLRSTGARVSGVTLYTTAIPPAPRIAV
HHEECCCCCCCEECCCEEEEEEEEECCCEEEEEEEECCCCEEECEEEEEECCCCCCEEEE
TTRGLALQDSRTAPFTVPTAASPVAVTVSLTGRDGTVPVQLLGRKMPEAPWTPLAFGTLR
EECCEEEECCCCCCEECCCCCCCEEEEEEEECCCCCEEHHHHCCCCCCCCCCCCCHHHHC
QGGSATTLEVGEPGIRQFMLRADARSAGFSRPPRIDLQFAGIGLIAAFNANGPYRLAVGN
CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEECCCCCEEEEECC
KAAVPSFLQAGDLLVQGAAIPVARLDNGPTPAPMDVGPSKALPFGLSPMKLALWAILLVG
CCCCCHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VGLLALAALRLLKVTASSGS
HHHHHHHHHHHHHEECCCCC
>Mature Secondary Structure
MKYPPLLAIALALSGCEGRNTPVDAVDDFALGIPVQPAPGPSIQRIDLPLSAILALKRED
CCCCHHHHEEHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHHHHHCCC
MGDIRVFDRASRPLSIALQGARLEEQAQRFAAVPFGSTGAAASGAGGTVSVQVRQSGGTV
CCCEEEEECCCCCEEEEEECCCHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCEE
TVDTGTPTAPGGDEAVLVDTRKVAQPAVALVLDAVLPARKPVEVSVSVSDDLGTWQPLAE
EECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHH
RVLFSPDEGGSVLGGGRIALSGALLKGRYLRIAWLRSTGARVSGVTLYTTAIPPAPRIAV
HHEECCCCCCCEECCCEEEEEEEEECCCEEEEEEEECCCCEEECEEEEEECCCCCCEEEE
TTRGLALQDSRTAPFTVPTAASPVAVTVSLTGRDGTVPVQLLGRKMPEAPWTPLAFGTLR
EECCEEEECCCCCCEECCCCCCCEEEEEEEECCCCCEEHHHHCCCCCCCCCCCCCHHHHC
QGGSATTLEVGEPGIRQFMLRADARSAGFSRPPRIDLQFAGIGLIAAFNANGPYRLAVGN
CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEECCCCCEEEEECC
KAAVPSFLQAGDLLVQGAAIPVARLDNGPTPAPMDVGPSKALPFGLSPMKLALWAILLVG
CCCCCHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VGLLALAALRLLKVTASSGS
HHHHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA