| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200344
Identifier: 87200344
GI number: 87200344
Start: 2476130
End: 2477185
Strand: Reverse
Name: 87200344
Synonym: Saro_2330
Alternate gene names: NA
Gene position: 2477185-2476130 (Counterclockwise)
Preceding gene: 87200345
Following gene: 87200343
Centisome position: 69.55
GC content: 67.14
Gene sequence:
>1056_bases ATGAACGCGCCGTTCGTGCCTTCGCGCGTGGTGGCGCGACTGGCCGATCCCGGGGAGCGCCCGGCAGTTGCGCGATTCCT CGACGCGCATCCCGATGCAACGGTGTTCCATCGCGCCGCATGGCTCGATGCGGTCGAACAATCGACCGGGCATCGGACGC ATGTCCTGGTATCCGGGCAAGACGAAGCGATCCGCGCGGTTCTGCCCCTGCACGAAGTCCATTCCCCGCTGTTCGGACGG GCACTGGTTTCGACCGGCTTCGGCGTCGGCGGCGGAGTCGTCGGCAAGGGCGATGCGGCTCTGTTCGCGGCGGCACAGGA ACTTGCCGTGCGGCTGAACTGCCCCACCGTCGAACTGCGCGGCGGTCCCTTGCCACAGGGAGATGGCTGGCACGTGAAGA CCGACAGCCACGCAGGCTTCGTCACGCCGCTTGCCGCCGACGACGAGGCGCAATTGCTGGCCATTCCGCGCAAGCAGCGC GCCGAAGTGCGGCGTGGGCTGGGCTACGGGATGGAAGTGCGCACCGGCCGTTCGCCCGAGGACAGGGCAATGCATCATGC GGTCTACGCGCAATCCGTGCGAAACCTCGGCACCCCGGTGTTTCCGCGCCGTCTGTTCGACGCCGTGCTCGACGGTTTCG GCGATGATGCCGACATTCTGACCGTCCTGCACGAAGGCAGGCCGCTTGCCTCGGTGTTGAGCCTTTACCATCGCGGCGCG GTGATGCCCTACTGGGGCGGAGGCACGTTCGAGGCGCGGGCCATGCGCGCGAACGATGTTATGTACTACGCGCTGATGAA CCATGCGCGGGCGCGTGGGTGCGACCGTTTCGATTTCGGTCGCTCCAAGGTCGATTCCGGTGCCTATCATTTCAAGCGCA ACTGGGGCTTCGCGCCGCAGCCGCTCTCCTACGCACACTGGACCGCCGACGGGCAGGCCCCGCGCGACGTCAATCCGCTC AGCCCGCGCTACCGGGCAAGGATCGCACTGTGGCAGAAGCTACCGCTGGCGGTGGCGAACCGGCTCGGCCCGATCATCGC GAACGGCCTTGCATGA
Upstream 100 bases:
>100_bases TGGCGGCAAAGCTCTCGCGGCTGGTACGTGAGTTCCGCTGGGGGCGCATGGACGAAATCGCTGCCATCGAGGCGGCGCGC ACACCGGTGAGGCGAGCGGC
Downstream 100 bases:
>100_bases GCGAGGTCCTGTTTCTCGCCCATCGCATCCCGTTCCCGCCCGACCGGGGCGACAAGATCCGTTCGTGCCACGTGCTGCGC CATATCGCCGGCCTCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNAPFVPSRVVARLADPGERPAVARFLDAHPDATVFHRAAWLDAVEQSTGHRTHVLVSGQDEAIRAVLPLHEVHSPLFGR ALVSTGFGVGGGVVGKGDAALFAAAQELAVRLNCPTVELRGGPLPQGDGWHVKTDSHAGFVTPLAADDEAQLLAIPRKQR AEVRRGLGYGMEVRTGRSPEDRAMHHAVYAQSVRNLGTPVFPRRLFDAVLDGFGDDADILTVLHEGRPLASVLSLYHRGA VMPYWGGGTFEARAMRANDVMYYALMNHARARGCDRFDFGRSKVDSGAYHFKRNWGFAPQPLSYAHWTADGQAPRDVNPL SPRYRARIALWQKLPLAVANRLGPIIANGLA
Sequences:
>Translated_351_residues MNAPFVPSRVVARLADPGERPAVARFLDAHPDATVFHRAAWLDAVEQSTGHRTHVLVSGQDEAIRAVLPLHEVHSPLFGR ALVSTGFGVGGGVVGKGDAALFAAAQELAVRLNCPTVELRGGPLPQGDGWHVKTDSHAGFVTPLAADDEAQLLAIPRKQR AEVRRGLGYGMEVRTGRSPEDRAMHHAVYAQSVRNLGTPVFPRRLFDAVLDGFGDDADILTVLHEGRPLASVLSLYHRGA VMPYWGGGTFEARAMRANDVMYYALMNHARARGCDRFDFGRSKVDSGAYHFKRNWGFAPQPLSYAHWTADGQAPRDVNPL SPRYRARIALWQKLPLAVANRLGPIIANGLA >Mature_351_residues MNAPFVPSRVVARLADPGERPAVARFLDAHPDATVFHRAAWLDAVEQSTGHRTHVLVSGQDEAIRAVLPLHEVHSPLFGR ALVSTGFGVGGGVVGKGDAALFAAAQELAVRLNCPTVELRGGPLPQGDGWHVKTDSHAGFVTPLAADDEAQLLAIPRKQR AEVRRGLGYGMEVRTGRSPEDRAMHHAVYAQSVRNLGTPVFPRRLFDAVLDGFGDDADILTVLHEGRPLASVLSLYHRGA VMPYWGGGTFEARAMRANDVMYYALMNHARARGCDRFDFGRSKVDSGAYHFKRNWGFAPQPLSYAHWTADGQAPRDVNPL SPRYRARIALWQKLPLAVANRLGPIIANGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38192; Mature: 38192
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPFVPSRVVARLADPGERPAVARFLDAHPDATVFHRAAWLDAVEQSTGHRTHVLVSGQ CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECC DEAIRAVLPLHEVHSPLFGRALVSTGFGVGGGVVGKGDAALFAAAQELAVRLNCPTVELR CHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEEEEC GGPLPQGDGWHVKTDSHAGFVTPLAADDEAQLLAIPRKQRAEVRRGLGYGMEVRTGRSPE CCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEECCCHHHHHHHHCCCCCEEECCCCCCH DRAMHHAVYAQSVRNLGTPVFPRRLFDAVLDGFGDDADILTVLHEGRPLASVLSLYHRGA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCC VMPYWGGGTFEARAMRANDVMYYALMNHARARGCDRFDFGRSKVDSGAYHFKRNWGFAPQ CEEECCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEECCCCCCCC PLSYAHWTADGQAPRDVNPLSPRYRARIALWQKLPLAVANRLGPIIANGLA CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNAPFVPSRVVARLADPGERPAVARFLDAHPDATVFHRAAWLDAVEQSTGHRTHVLVSGQ CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECC DEAIRAVLPLHEVHSPLFGRALVSTGFGVGGGVVGKGDAALFAAAQELAVRLNCPTVELR CHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEEEEC GGPLPQGDGWHVKTDSHAGFVTPLAADDEAQLLAIPRKQRAEVRRGLGYGMEVRTGRSPE CCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEECCCHHHHHHHHCCCCCEEECCCCCCH DRAMHHAVYAQSVRNLGTPVFPRRLFDAVLDGFGDDADILTVLHEGRPLASVLSLYHRGA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCC VMPYWGGGTFEARAMRANDVMYYALMNHARARGCDRFDFGRSKVDSGAYHFKRNWGFAPQ CEEECCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEECCCCCCCC PLSYAHWTADGQAPRDVNPLSPRYRARIALWQKLPLAVANRLGPIIANGLA CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA