| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200343
Identifier: 87200343
GI number: 87200343
Start: 2474901
End: 2476133
Strand: Reverse
Name: 87200343
Synonym: Saro_2329
Alternate gene names: NA
Gene position: 2476133-2474901 (Counterclockwise)
Preceding gene: 87200344
Following gene: 87200342
Centisome position: 69.52
GC content: 71.29
Gene sequence:
>1233_bases ATGAGCGAGGTCCTGTTTCTCGCCCATCGCATCCCGTTCCCGCCCGACCGGGGCGACAAGATCCGTTCGTGCCACGTGCT GCGCCATATCGCCGGCCTCGCGCCCGTCCACGTCGCCTGCTTTGCCGATGACGAGGGCGATATGGCGCATGAGCCGGACC TTGCGGCGATCGCGGCCAGCCACTGCCTGACCCCACGAACGCGCTCGCTGCCGCTGGCGGGGGTAGATGCCCTCGTGCGT GGCAAGCCCGTCAGCCTGACCGCCTTTGCCGACAGGCGGCTGGCGGCCTACGTCGCCCGCGTTCTCGACGAGCGACCGAT TGGCGCGATTTACGTCTTGTCCGGGCAAATGGCGCAGTACGTGCCCGCCCGGTTCGCGGGCCGCGTCGTCATGGATTTCG TCGATGTCGATTCCGCCAAGTTCGAAGCCTATGCCGCTGCCGCGCGTTTCCCCGCCAGCCTGCTCTACGCCCGCGAGGCG CGCCTGCTTTCGCGCTTCGAGGATGCCGTGGCCCGCCGCGCGCACGCCAGCCTTCTGGTCACGCCCGAGGAAGCCGCGCT CTTTCGCCAGCGCCTCGCGCCCGGTGCGGAGCCGGCGGTCATTTCGCTGGGCAACGGCATCGATACCGATTTCTTCGACC CGGAAGGGATGTCCCCCGCGCCCGAGACGGTGGGCGCGGGACCGCAGCTCACGTTCACCGGCCAGATGGACTACCCGCCC AACGTAGCCGCCGTGGAGATGTTTGCCCGGGCCGTCATGCCCCAGGTGCGCGCCGTGTTTCCCCAGGCGCGCTTCAACGT CGTCGGCCGTGCGCCGACCCTGGCGGTGCGTTCGCTCGATGGCGTGAACGGGACTCGCGTGACCGGCGCCGTCCTCGACG TGCGCCCGTGGCTTGCCGGGGCCGACCTCGTCGTCGCACCGCTCACCATCGCGCGCGGGGTGCAGAACAAGGTGCTCGAG GCCATGGCCATGGCCCGCCCGGTGCTTGCCACGCCCGAAGCCGCAACAGGGATCCCGGCGCGCGAAGAACACGAGCTGGT CGTCGCCGATGGCGCCGAGGCGCTGGCCAAGGCCGCGCTTTCCCTGCTCCACGACAAGGTCCGCGCCGCCACCATCGGGC ATTCCGCCCGCGCCATCGTGGTGGAGCGGTGCGGCTGGGCGGGCGTCCTCGCTCCGCTCGCCGGCCTGCTCGGCCTGCCC CGCCACCCGGAGGCGCCGCGTGTCGCCGCCTGA
Upstream 100 bases:
>100_bases ATCCGCTCAGCCCGCGCTACCGGGCAAGGATCGCACTGTGGCAGAAGCTACCGCTGGCGGTGGCGAACCGGCTCGGCCCG ATCATCGCGAACGGCCTTGC
Downstream 100 bases:
>100_bases TCTCGCGCTCAGGGCCCCGCTCGGCCGCGCCTGGACCGCGCTGCCCGCCCAGTGGCGGCGTGCGCTCGGCCTGCTCGCGC TGGCGTGGCTCGGCAACGTA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; A-Glycosyltransferase; Glycosyltransferase-Like Protein; Sugar Transferase; Glycosyltransferase Group 1 Protein; Glycosyl Transferase Group 1 Protein; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSEVLFLAHRIPFPPDRGDKIRSCHVLRHIAGLAPVHVACFADDEGDMAHEPDLAAIAASHCLTPRTRSLPLAGVDALVR GKPVSLTAFADRRLAAYVARVLDERPIGAIYVLSGQMAQYVPARFAGRVVMDFVDVDSAKFEAYAAAARFPASLLYAREA RLLSRFEDAVARRAHASLLVTPEEAALFRQRLAPGAEPAVISLGNGIDTDFFDPEGMSPAPETVGAGPQLTFTGQMDYPP NVAAVEMFARAVMPQVRAVFPQARFNVVGRAPTLAVRSLDGVNGTRVTGAVLDVRPWLAGADLVVAPLTIARGVQNKVLE AMAMARPVLATPEAATGIPAREEHELVVADGAEALAKAALSLLHDKVRAATIGHSARAIVVERCGWAGVLAPLAGLLGLP RHPEAPRVAA
Sequences:
>Translated_410_residues MSEVLFLAHRIPFPPDRGDKIRSCHVLRHIAGLAPVHVACFADDEGDMAHEPDLAAIAASHCLTPRTRSLPLAGVDALVR GKPVSLTAFADRRLAAYVARVLDERPIGAIYVLSGQMAQYVPARFAGRVVMDFVDVDSAKFEAYAAAARFPASLLYAREA RLLSRFEDAVARRAHASLLVTPEEAALFRQRLAPGAEPAVISLGNGIDTDFFDPEGMSPAPETVGAGPQLTFTGQMDYPP NVAAVEMFARAVMPQVRAVFPQARFNVVGRAPTLAVRSLDGVNGTRVTGAVLDVRPWLAGADLVVAPLTIARGVQNKVLE AMAMARPVLATPEAATGIPAREEHELVVADGAEALAKAALSLLHDKVRAATIGHSARAIVVERCGWAGVLAPLAGLLGLP RHPEAPRVAA >Mature_409_residues SEVLFLAHRIPFPPDRGDKIRSCHVLRHIAGLAPVHVACFADDEGDMAHEPDLAAIAASHCLTPRTRSLPLAGVDALVRG KPVSLTAFADRRLAAYVARVLDERPIGAIYVLSGQMAQYVPARFAGRVVMDFVDVDSAKFEAYAAAARFPASLLYAREAR LLSRFEDAVARRAHASLLVTPEEAALFRQRLAPGAEPAVISLGNGIDTDFFDPEGMSPAPETVGAGPQLTFTGQMDYPPN VAAVEMFARAVMPQVRAVFPQARFNVVGRAPTLAVRSLDGVNGTRVTGAVLDVRPWLAGADLVVAPLTIARGVQNKVLEA MAMARPVLATPEAATGIPAREEHELVVADGAEALAKAALSLLHDKVRAATIGHSARAIVVERCGWAGVLAPLAGLLGLPR HPEAPRVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43450; Mature: 43318
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVLFLAHRIPFPPDRGDKIRSCHVLRHIAGLAPVHVACFADDEGDMAHEPDLAAIAAS CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHH HCLTPRTRSLPLAGVDALVRGKPVSLTAFADRRLAAYVARVLDERPIGAIYVLSGQMAQY HCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH VPARFAGRVVMDFVDVDSAKFEAYAAAARFPASLLYAREARLLSRFEDAVARRAHASLLV HHHHHHCHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE TPEEAALFRQRLAPGAEPAVISLGNGIDTDFFDPEGMSPAPETVGAGPQLTFTGQMDYPP CCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCC NVAAVEMFARAVMPQVRAVFPQARFNVVGRAPTLAVRSLDGVNGTRVTGAVLDVRPWLAG CHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCC ADLVVAPLTIARGVQNKVLEAMAMARPVLATPEAATGIPAREEHELVVADGAEALAKAAL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHH SLLHDKVRAATIGHSARAIVVERCGWAGVLAPLAGLLGLPRHPEAPRVAA HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SEVLFLAHRIPFPPDRGDKIRSCHVLRHIAGLAPVHVACFADDEGDMAHEPDLAAIAAS CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHH HCLTPRTRSLPLAGVDALVRGKPVSLTAFADRRLAAYVARVLDERPIGAIYVLSGQMAQY HCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH VPARFAGRVVMDFVDVDSAKFEAYAAAARFPASLLYAREARLLSRFEDAVARRAHASLLV HHHHHHCHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE TPEEAALFRQRLAPGAEPAVISLGNGIDTDFFDPEGMSPAPETVGAGPQLTFTGQMDYPP CCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCC NVAAVEMFARAVMPQVRAVFPQARFNVVGRAPTLAVRSLDGVNGTRVTGAVLDVRPWLAG CHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCC ADLVVAPLTIARGVQNKVLEAMAMARPVLATPEAATGIPAREEHELVVADGAEALAKAAL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHH SLLHDKVRAATIGHSARAIVVERCGWAGVLAPLAGLLGLPRHPEAPRVAA HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA