Click here to switch to the map view.

The map label for this gene is yafE [C]

Identifier: 87200333

GI number: 87200333

Start: 2463215

End: 2463847

Strand: Reverse

Name: yafE [C]

Synonym: Saro_2319

Alternate gene names: 87200333

Gene position: 2463847-2463215 (Counterclockwise)

Preceding gene: 87200334

Following gene: 87200331

Centisome position: 69.18

GC content: 66.35

Gene sequence:

>633_bases
ATGGGACTGAAGGCCGCTTGGGAGGCGCACGTCGTGCCGCGCATGATCAAGTGCGCGTGCGCTTCGCCGAACATCATGGA
GCTGCGGGCGGGCGTCGTGCCGCGCGCGCAGGGGCGCGTGTTCGAGATTGGCTGCGGCGGCGGACTGAACCAGCGGTTCT
ACGACAGCTCCCGCGTGACAGGTTTTGCCGGGATCGATCCTTCGGGCAAGCTGCTCGACTATGCGCGCGAGGCTGCGGCC
CGGAAGGGATGGCAGGCCGACATCCGCGAGGGCGTTGGCGAGGATATCCCGTTCGAGGACGAGAGCTTCGATACCGCCGT
GTGCACCTATACGCTGTGTTCGGTGCACGATCCGGTCAAGGTGCTGAGCGAACTTCATCGCATTCTCAAGCCGGGCGGCA
CGCTGCTGTTTCTCGAACACGGGTTGAGCCCCGATGCCGGCGTTGCGAAATGGCAGCGGCGGATCGAACCCTTGTGGAAG
CCGCTGATGGGCGGGTGCCACCTTTCGCGCGCGGTGACCGCGCCTGTGATCCGGGCGGGTTTCCAGGTGGAGCATCCGGG
CCACCAGTACATGCCGGGCATGCCCAGGTGGGCGGCGTGGATGGAATGGGGTTCGGGCGTGAAGCTGCGCTAG

Upstream 100 bases:

>100_bases
CGCCCGAGGGCTGCGGCGGAAAGTGAAACCGGCCGATACCGGCGATTGCGCTTGCCAGGCATAGGCTGCACTCTGCCCCC
ATAACCAACCGGGGGTGGAT

Downstream 100 bases:

>100_bases
GCCAGAACGAGAAAGGCCCCGCCGTGATGGCGGGGCCTTTCGTTTGTCGGCAGGTTCGGACCGGTCAGGCGCCGAAGGTG
CGCTGCCACCAGCCACGGCG

Product: generic methyltransferase

Products: NA

Alternate protein names: Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Phosphatidylethanolamine N-Methyltransferase; Ubiquinone Biosynthesis O-Methyltransferase; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Methyltransferase UbiE/COQ5 Family; Methyltransferase Domain Family; SAM-Dependent Methyltransferase UbiE/COQ5 Family; Phospholipid Methyltransferase; Sam Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Generic Methyltransferase; Ubiquinone/Menaquinone Biosynthesis-Related Protein; Ubiquinone/Menaquinone Biosynthesis Methyl Transferase; Methyltransferase Domain Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase; UbiE/COQ5 Methyltransferase; Response Regulator Receiver Protein

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MGLKAAWEAHVVPRMIKCACASPNIMELRAGVVPRAQGRVFEIGCGGGLNQRFYDSSRVTGFAGIDPSGKLLDYAREAAA
RKGWQADIREGVGEDIPFEDESFDTAVCTYTLCSVHDPVKVLSELHRILKPGGTLLFLEHGLSPDAGVAKWQRRIEPLWK
PLMGGCHLSRAVTAPVIRAGFQVEHPGHQYMPGMPRWAAWMEWGSGVKLR

Sequences:

>Translated_210_residues
MGLKAAWEAHVVPRMIKCACASPNIMELRAGVVPRAQGRVFEIGCGGGLNQRFYDSSRVTGFAGIDPSGKLLDYAREAAA
RKGWQADIREGVGEDIPFEDESFDTAVCTYTLCSVHDPVKVLSELHRILKPGGTLLFLEHGLSPDAGVAKWQRRIEPLWK
PLMGGCHLSRAVTAPVIRAGFQVEHPGHQYMPGMPRWAAWMEWGSGVKLR
>Mature_209_residues
GLKAAWEAHVVPRMIKCACASPNIMELRAGVVPRAQGRVFEIGCGGGLNQRFYDSSRVTGFAGIDPSGKLLDYAREAAAR
KGWQADIREGVGEDIPFEDESFDTAVCTYTLCSVHDPVKVLSELHRILKPGGTLLFLEHGLSPDAGVAKWQRRIEPLWKP
LMGGCHLSRAVTAPVIRAGFQVEHPGHQYMPGMPRWAAWMEWGSGVKLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI164663805, Length=153, Percent_Identity=39.2156862745098, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI89145417, Length=164, Percent_Identity=32.9268292682927, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320522, Length=130, Percent_Identity=29.2307692307692, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23093; Mature: 22962

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKAAWEAHVVPRMIKCACASPNIMELRAGVVPRAQGRVFEIGCGGGLNQRFYDSSRVT
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCHHCCCCCCC
GFAGIDPSGKLLDYAREAAARKGWQADIREGVGEDIPFEDESFDTAVCTYTLCSVHDPVK
EEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
VLSELHRILKPGGTLLFLEHGLSPDAGVAKWQRRIEPLWKPLMGGCHLSRAVTAPVIRAG
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
FQVEHPGHQYMPGMPRWAAWMEWGSGVKLR
CEECCCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GLKAAWEAHVVPRMIKCACASPNIMELRAGVVPRAQGRVFEIGCGGGLNQRFYDSSRVT
CCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCHHCCCCCCC
GFAGIDPSGKLLDYAREAAARKGWQADIREGVGEDIPFEDESFDTAVCTYTLCSVHDPVK
EEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
VLSELHRILKPGGTLLFLEHGLSPDAGVAKWQRRIEPLWKPLMGGCHLSRAVTAPVIRAG
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
FQVEHPGHQYMPGMPRWAAWMEWGSGVKLR
CEECCCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA