Click here to switch to the map view.

The map label for this gene is 87200297

Identifier: 87200297

GI number: 87200297

Start: 2424614

End: 2424886

Strand: Reverse

Name: 87200297

Synonym: Saro_2283

Alternate gene names: NA

Gene position: 2424886-2424614 (Counterclockwise)

Preceding gene: 87200298

Following gene: 87200296

Centisome position: 68.08

GC content: 59.34

Gene sequence:

>273_bases
GTGAAGTGGACGTCGATCATTGCCATTTACGGGCTGTTCTGGGTCATGGCGGCGTTCATCGTCCTGCCCTTTGGCGTACG
CACCCACGACGAACTGGGCCACGCGAAAGTGTCGGGGCAGGCAGACAGCGCGCCCGCCAATTTCAAGCCGCGAAAGATCG
CCATCCGCGCCACCATCCTGGCGACGCTGATGTTCGCGTTTTTCTACGCCAACTATTTCAATGAATGGATCACGGTCGCC
GACCTCGACCTGACGACCTACTTCGGCCACTAG

Upstream 100 bases:

>100_bases
CCGTTGCCGAAGCCGTGCGCCTTGCGGTAAGGCGCACGGGCCAGCGCTGGTCCGGCAAGAAGCCGGTTGTCCAGGTCCTG
CTGCGGGAAGGCTGACTCGC

Downstream 100 bases:

>100_bases
TCGTCAGACCCGGGGGCAGACTGGTGGACAAGGCTGGATCACGGCGGATCGATCCGGCGCTCGTGTGGCTGATGCTGCTG
GCGCTGGCGTTTCGCGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKWTSIIAIYGLFWVMAAFIVLPFGVRTHDELGHAKVSGQADSAPANFKPRKIAIRATILATLMFAFFYANYFNEWITVA
DLDLTTYFGH

Sequences:

>Translated_90_residues
MKWTSIIAIYGLFWVMAAFIVLPFGVRTHDELGHAKVSGQADSAPANFKPRKIAIRATILATLMFAFFYANYFNEWITVA
DLDLTTYFGH
>Mature_90_residues
MKWTSIIAIYGLFWVMAAFIVLPFGVRTHDELGHAKVSGQADSAPANFKPRKIAIRATILATLMFAFFYANYFNEWITVA
DLDLTTYFGH

Specific function: Unknown

COG id: COG5454

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10192; Mature: 10192

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWTSIIAIYGLFWVMAAFIVLPFGVRTHDELGHAKVSGQADSAPANFKPRKIAIRATIL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHH
ATLMFAFFYANYFNEWITVADLDLTTYFGH
HHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
>Mature Secondary Structure
MKWTSIIAIYGLFWVMAAFIVLPFGVRTHDELGHAKVSGQADSAPANFKPRKIAIRATIL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHH
ATLMFAFFYANYFNEWITVADLDLTTYFGH
HHHHHHHHHHHHHHHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA