| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200251
Identifier: 87200251
GI number: 87200251
Start: 2380449
End: 2380904
Strand: Reverse
Name: 87200251
Synonym: Saro_2237
Alternate gene names: NA
Gene position: 2380904-2380449 (Counterclockwise)
Preceding gene: 87200252
Following gene: 87200246
Centisome position: 66.85
GC content: 67.76
Gene sequence:
>456_bases ATGACCATCGCACTCGAACACGCGACCGACCTTGTCGTGGAGCTTTCGCCCCCGCGCGAGATGGGCGAATGTCCGCCCGG CACCCGGCGAATCATTCCGATCGTTGGTGGTACGGCCAGCGGCCCGCTCCTGTCCGGCCGCATCCTGCCCATCGGGGCGG ACTGGCAGACCGTGCTGGCGGGCGGAATCGCCGACCTGGACGCGCGCTATGCCATCGAGATGGCCGATGGCGCGGTGATC GAGGTCGTGAGCCAGGGCATCCGCCACGCCTCGGCCGAAGTCCACGCCCGCATTGCCTCGGGCGAACAGGTCGATCCGTC CGAATACTACATGCGCACCGCGATCCGCCTCGAGACCGGGCACCCCGCCCACGACTGGGTCAATCGTGCGCTGTTCCTCG CAAAGGGCGGCAAGGTCGGCAACACGGTACGGCTGTCGGTCTACAAGGTGGGCTAG
Upstream 100 bases:
>100_bases TCATGCTCGCCTACAAGCAGGCGGCGGGGTTCGCCAAGGACCGTCTCAACGCCGCGCCGCGCACCATACCCGAAGGCGCC CGCGTCACCCGGGAGCCTGC
Downstream 100 bases:
>100_bases CCGAGCAGCGCCTTGTGCTGCGGGCCAAGGAAGATCGCGTTGTTTCGCGTGAGGTCGCCCGCCACGAGCTTTCGTCCGTT CCAACCGTGCGCCGCAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLAGGIADLDARYAIEMADGAVI EVVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETGHPAHDWVNRALFLAKGGKVGNTVRLSVYKVG
Sequences:
>Translated_151_residues MTIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLAGGIADLDARYAIEMADGAVI EVVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETGHPAHDWVNRALFLAKGGKVGNTVRLSVYKVG >Mature_150_residues TIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLAGGIADLDARYAIEMADGAVIE VVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETGHPAHDWVNRALFLAKGGKVGNTVRLSVYKVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0311 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011250 - InterPro: IPR020915 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16049; Mature: 15917
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLA CEEEECCCCEEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCEECCEEEEECCCHHHHHH GGIADLDARYAIEMADGAVIEVVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETG CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHEEEEEEEEECC HPAHDWVNRALFLAKGGKVGNTVRLSVYKVG CCHHHHHHHEEEEECCCCCCCEEEEEEEEEC >Mature Secondary Structure TIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLA EEEECCCCEEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCEECCEEEEECCCHHHHHH GGIADLDARYAIEMADGAVIEVVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETG CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHEEEEEEEEECC HPAHDWVNRALFLAKGGKVGNTVRLSVYKVG CCHHHHHHHEEEEECCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA