Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200251

Identifier: 87200251

GI number: 87200251

Start: 2380449

End: 2380904

Strand: Reverse

Name: 87200251

Synonym: Saro_2237

Alternate gene names: NA

Gene position: 2380904-2380449 (Counterclockwise)

Preceding gene: 87200252

Following gene: 87200246

Centisome position: 66.85

GC content: 67.76

Gene sequence:

>456_bases
ATGACCATCGCACTCGAACACGCGACCGACCTTGTCGTGGAGCTTTCGCCCCCGCGCGAGATGGGCGAATGTCCGCCCGG
CACCCGGCGAATCATTCCGATCGTTGGTGGTACGGCCAGCGGCCCGCTCCTGTCCGGCCGCATCCTGCCCATCGGGGCGG
ACTGGCAGACCGTGCTGGCGGGCGGAATCGCCGACCTGGACGCGCGCTATGCCATCGAGATGGCCGATGGCGCGGTGATC
GAGGTCGTGAGCCAGGGCATCCGCCACGCCTCGGCCGAAGTCCACGCCCGCATTGCCTCGGGCGAACAGGTCGATCCGTC
CGAATACTACATGCGCACCGCGATCCGCCTCGAGACCGGGCACCCCGCCCACGACTGGGTCAATCGTGCGCTGTTCCTCG
CAAAGGGCGGCAAGGTCGGCAACACGGTACGGCTGTCGGTCTACAAGGTGGGCTAG

Upstream 100 bases:

>100_bases
TCATGCTCGCCTACAAGCAGGCGGCGGGGTTCGCCAAGGACCGTCTCAACGCCGCGCCGCGCACCATACCCGAAGGCGCC
CGCGTCACCCGGGAGCCTGC

Downstream 100 bases:

>100_bases
CCGAGCAGCGCCTTGTGCTGCGGGCCAAGGAAGATCGCGTTGTTTCGCGTGAGGTCGCCCGCCACGAGCTTTCGTCCGTT
CCAACCGTGCGCCGCAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLAGGIADLDARYAIEMADGAVI
EVVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETGHPAHDWVNRALFLAKGGKVGNTVRLSVYKVG

Sequences:

>Translated_151_residues
MTIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLAGGIADLDARYAIEMADGAVI
EVVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETGHPAHDWVNRALFLAKGGKVGNTVRLSVYKVG
>Mature_150_residues
TIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLAGGIADLDARYAIEMADGAVIE
VVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETGHPAHDWVNRALFLAKGGKVGNTVRLSVYKVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0311 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR020915 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16049; Mature: 15917

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLA
CEEEECCCCEEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCEECCEEEEECCCHHHHHH
GGIADLDARYAIEMADGAVIEVVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETG
CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHEEEEEEEEECC
HPAHDWVNRALFLAKGGKVGNTVRLSVYKVG
CCHHHHHHHEEEEECCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
TIALEHATDLVVELSPPREMGECPPGTRRIIPIVGGTASGPLLSGRILPIGADWQTVLA
EEEECCCCEEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCEECCEEEEECCCHHHHHH
GGIADLDARYAIEMADGAVIEVVSQGIRHASAEVHARIASGEQVDPSEYYMRTAIRLETG
CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHEEEEEEEEECC
HPAHDWVNRALFLAKGGKVGNTVRLSVYKVG
CCHHHHHHHEEEEECCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA