| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200228
Identifier: 87200228
GI number: 87200228
Start: 2356571
End: 2356927
Strand: Reverse
Name: 87200228
Synonym: Saro_2213
Alternate gene names: NA
Gene position: 2356927-2356571 (Counterclockwise)
Preceding gene: 87200230
Following gene: 87200227
Centisome position: 66.18
GC content: 62.75
Gene sequence:
>357_bases ATGGTTCAGTGTTTAGCATCTTCTCTCGATCGCTCCTTCGCGGCGCTGTCCGATGGGACCCGCCGCGACATCATCGATCA GCTCGGCCAGGCCGAAGCGTCGGTCACCAGCCTTGCTGACCGTTTCCGGATGACGCCTACGGGCATGAAGAAGCATCTCC AGGTGCTGGAACGGGCAGGGCTCGTCGTTACCCGCAAGGTCGGGCGCGTCAGGATATGCAGGCTCGGCACGCGCGGGCTC GATGCGGAGGCGGCGTGGATCGAGGCGCACCGCAAGCTGTTCGAAGCCCGCTTTGAGGCACTGGACGGGATTCTCGGTGA AATGAAAGCGGAGGAACGCGATGGACAGTCAGTCTGA
Upstream 100 bases:
>100_bases CCGGCAAAGCGGTAGGCCGGTTCACCCCTTTGCGGAATTGACCTTTGCGTCAGGCACGGCGCTTGCGCCGCAGGCATCGT CGCGCTAAACACTGAACCAT
Downstream 100 bases:
>100_bases AAATGGAAGCGGCGCGGGCAACCGCACATCGATCGAGCGCAGGGGCGATCGCGAGCTCGTCGTGACGCGGACATTCGATG CGCCGCGCGCGATGGTCTAC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcription Regulator ArsR; ArsR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Arsenical Resistance Operon Repressor; ArsR Family Regulatory; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcriptional Regulatory ArsR Family; Transcriptional Regulator Arsr Family; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAGLVVTRKVGRVRICRLGTRGL DAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV
Sequences:
>Translated_118_residues MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAGLVVTRKVGRVRICRLGTRGL DAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV >Mature_118_residues MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAGLVVTRKVGRVRICRLGTRGL DAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13058; Mature: 13058
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAG CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC LVVTRKVGRVRICRLGTRGLDAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV HHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAG CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC LVVTRKVGRVRICRLGTRGLDAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV HHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA