Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200224

Identifier: 87200224

GI number: 87200224

Start: 2352836

End: 2353774

Strand: Reverse

Name: 87200224

Synonym: Saro_2209

Alternate gene names: NA

Gene position: 2353774-2352836 (Counterclockwise)

Preceding gene: 87200226

Following gene: 87200223

Centisome position: 66.09

GC content: 62.09

Gene sequence:

>939_bases
GTGGAGGCTGCACGGGGAGGGCACCTCAACTGGAGTACGTCGATGCCCCCGTTAGACAAACCTCATCAACTCGAACGCCG
CGCCCGCGCGATCGTCGAAAGCCTTCAGGGTACATGGAGTCGGGGCAAAGGCATGTGCTGCTGCCCGGCGCATGATGACC
GAACTCCCTCTTTGAGCGTGACACTGGGAAGAAAGGCGATCCTGTTTCATTGCTTCGCGGGATGCTCGAACGAGGAGGTC
ATAGCGGCACTGGACCGCCAGGGTGTTCGCAGCCGTGACCTGTTCGATGGCTCTAGTGCCGTGGTCGCTGATCGACAGGA
AAATAGGGCCTTCGATTCCAACGCGCGGCGTTTGTGGCAATCGGCGACGGCGATCTCCGACAGCCCTGCCGAAGGATACC
TCGCACAGCGCGGGATCCTGCGTGCCTCTGATCAGCTCCGTTACCTCGAGCGCACGCCGCTCGGACCATGTGGCGCGGTC
CAGTTCCTCCCTGCAATGTTGGCGGCCGTCACGACTGACATCGGCATAATAGCGGTGCACAGGACGTTTATTGATACTGC
GAGCGGCAAGTTGGCGGGTTTCGAGCGTCCCAAGCGTGCGCTGGGACGCCTCAGCTGTGGTGCTGTCAGACTTGCCCCGC
CAGCCGCGGGCCGGTTGGGCCTTGCCGAAGGTATCGAAAGCGCCCTGTCAGCCATGCAGCTGTTTGGGATTCCTTGCTGG
GCAACGCTCGGGAACGAGCGGTTCGGCCTCGTCGCGATTCCCGAGAGTGTGCGCGAGCTCCACTTGTTCATCGACAATGA
TCCGGGGGGCGAGCTCGCGGATCAGCGCGCACGAAAGGCCTATTCTGCATCAGGCCGTGTGATCCACTTGCGAGCACCAG
CGTCGACCGGTCTCGACTGGAACGATGAACTCAAGGCAAGGCTCGCTCGGCAAACCTGA

Upstream 100 bases:

>100_bases
GATAGCTTTCATTGTCATTTTTCGATCCTTCCATAGCCGAATCGAGTGAGAACATATATAGAACAAGCGGCGTAGGAAAT
TGGTTTGGCGCGAGTGCAGA

Downstream 100 bases:

>100_bases
TCAGCGAGCCAGAGGGGAGGGGGCCTTCGGCTGATTGTGGCCTGCGAGACGCAGGACCTCGTCAGGAGGTTTTCCATGTC
CAACTCTTCCCTCGCTTTCG

Product: genomic island protein

Products: NA

Alternate protein names: Genomic Island Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEAARGGHLNWSTSMPPLDKPHQLERRARAIVESLQGTWSRGKGMCCCPAHDDRTPSLSVTLGRKAILFHCFAGCSNEEV
IAALDRQGVRSRDLFDGSSAVVADRQENRAFDSNARRLWQSATAISDSPAEGYLAQRGILRASDQLRYLERTPLGPCGAV
QFLPAMLAAVTTDIGIIAVHRTFIDTASGKLAGFERPKRALGRLSCGAVRLAPPAAGRLGLAEGIESALSAMQLFGIPCW
ATLGNERFGLVAIPESVRELHLFIDNDPGGELADQRARKAYSASGRVIHLRAPASTGLDWNDELKARLARQT

Sequences:

>Translated_312_residues
MEAARGGHLNWSTSMPPLDKPHQLERRARAIVESLQGTWSRGKGMCCCPAHDDRTPSLSVTLGRKAILFHCFAGCSNEEV
IAALDRQGVRSRDLFDGSSAVVADRQENRAFDSNARRLWQSATAISDSPAEGYLAQRGILRASDQLRYLERTPLGPCGAV
QFLPAMLAAVTTDIGIIAVHRTFIDTASGKLAGFERPKRALGRLSCGAVRLAPPAAGRLGLAEGIESALSAMQLFGIPCW
ATLGNERFGLVAIPESVRELHLFIDNDPGGELADQRARKAYSASGRVIHLRAPASTGLDWNDELKARLARQT
>Mature_312_residues
MEAARGGHLNWSTSMPPLDKPHQLERRARAIVESLQGTWSRGKGMCCCPAHDDRTPSLSVTLGRKAILFHCFAGCSNEEV
IAALDRQGVRSRDLFDGSSAVVADRQENRAFDSNARRLWQSATAISDSPAEGYLAQRGILRASDQLRYLERTPLGPCGAV
QFLPAMLAAVTTDIGIIAVHRTFIDTASGKLAGFERPKRALGRLSCGAVRLAPPAAGRLGLAEGIESALSAMQLFGIPCW
ATLGNERFGLVAIPESVRELHLFIDNDPGGELADQRARKAYSASGRVIHLRAPASTGLDWNDELKARLARQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33723; Mature: 33723

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAARGGHLNWSTSMPPLDKPHQLERRARAIVESLQGTWSRGKGMCCCPAHDDRTPSLSV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE
TLGRKAILFHCFAGCSNEEVIAALDRQGVRSRDLFDGSSAVVADRQENRAFDSNARRLWQ
EECHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCCHHHHHHHHHH
SATAISDSPAEGYLAQRGILRASDQLRYLERTPLGPCGAVQFLPAMLAAVTTDIGIIAVH
HHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEEH
RTFIDTASGKLAGFERPKRALGRLSCGAVRLAPPAAGRLGLAEGIESALSAMQLFGIPCW
HHHHHCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCE
ATLGNERFGLVAIPESVRELHLFIDNDPGGELADQRARKAYSASGRVIHLRAPASTGLDW
EECCCCCEEEEECCHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
NDELKARLARQT
CHHHHHHHHCCC
>Mature Secondary Structure
MEAARGGHLNWSTSMPPLDKPHQLERRARAIVESLQGTWSRGKGMCCCPAHDDRTPSLSV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE
TLGRKAILFHCFAGCSNEEVIAALDRQGVRSRDLFDGSSAVVADRQENRAFDSNARRLWQ
EECHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCCHHHHHHHHHH
SATAISDSPAEGYLAQRGILRASDQLRYLERTPLGPCGAVQFLPAMLAAVTTDIGIIAVH
HHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEEH
RTFIDTASGKLAGFERPKRALGRLSCGAVRLAPPAAGRLGLAEGIESALSAMQLFGIPCW
HHHHHCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCE
ATLGNERFGLVAIPESVRELHLFIDNDPGGELADQRARKAYSASGRVIHLRAPASTGLDW
EECCCCCEEEEECCHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
NDELKARLARQT
CHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA