| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200207
Identifier: 87200207
GI number: 87200207
Start: 2331079
End: 2331507
Strand: Reverse
Name: 87200207
Synonym: Saro_2191
Alternate gene names: NA
Gene position: 2331507-2331079 (Counterclockwise)
Preceding gene: 87200208
Following gene: 87200206
Centisome position: 65.46
GC content: 62.94
Gene sequence:
>429_bases ATGGCCCACTGCTACTACCACGCCCTCTCGTCGGTCCGGAAATGGGGCGGCACGGTCGATGACTATCTCCCGCTGCACCA GTGGTTCGACCAGTCCAAGGCAATCCTGGCAGACCCACGGCACCGCGCGCTGCGGCACCATGCCGAGGGGATATTCATGC TCGAAACCCTGTTCGGCGAGACCCTCGTCAATGCCGATGGCCGGGTCGTTCCGGTGCGTCTGGTCGGCGAACAGCACGTG CGCGAAGACCTGGGCTCGATCCCCTCCTTTGCCGATTGGGCGCGCTTGATCACGCCGCAGGCCTGGATGCTTCGAGGCAA CCCTCTGGACGGCGCTGAAGGGGTGACGATCGACATGCCTCTCTCCGACGAAGCAGTTTCGTCCAGGAATGAGCCATCGG TTGGAGGAGCAGTCATTACCGTGATCTAG
Upstream 100 bases:
>100_bases CAACTCGTGATCGATGTGGCTGAGGCGACGTTCGTGCTGGATTGCAGTCTGCGCTTCATTGCGACCGATGATCACTCGAC CGAGCTCTAGGAGACCTGGC
Downstream 100 bases:
>100_bases GATGGGATTCTCCGGTGGAAGGTCGGGCAGGGATGATCCAGCCAAGATCGGAGGGAAACGAGTCAGGGCTGACCTGCTCA AGGCATCCAGCTCCACCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MAHCYYHALSSVRKWGGTVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHV REDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPLSDEAVSSRNEPSVGGAVITVI
Sequences:
>Translated_142_residues MAHCYYHALSSVRKWGGTVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHV REDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPLSDEAVSSRNEPSVGGAVITVI >Mature_141_residues AHCYYHALSSVRKWGGTVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHVR EDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPLSDEAVSSRNEPSVGGAVITVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15727; Mature: 15596
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHCYYHALSSVRKWGGTVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGE CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCHHHHHHHHHH TLVNADGRVVPVRLVGEQHVREDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMP HHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEECC LSDEAVSSRNEPSVGGAVITVI CCCHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure AHCYYHALSSVRKWGGTVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGE CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCHHHHHHHHHH TLVNADGRVVPVRLVGEQHVREDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMP HHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEECC LSDEAVSSRNEPSVGGAVITVI CCCHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA