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The map label for this gene is ssb [H]

Identifier: 87200206

GI number: 87200206

Start: 2330329

End: 2330718

Strand: Reverse

Name: ssb [H]

Synonym: Saro_2190

Alternate gene names: 87200206

Gene position: 2330718-2330329 (Counterclockwise)

Preceding gene: 87200207

Following gene: 87200204

Centisome position: 65.44

GC content: 61.03

Gene sequence:

>390_bases
ATGACCAATCTCGTTATCCTCGTTGGCCGCATCGCTCGCGACCCCGAAACCCGCACCACCCAGGGTGGAACCAGCATCAC
CTCGATCTCGGTCGTGACCGACCGTCCAGCCCGCAAGGATGGCAAGACCTACAAGGACGAAAACGGCTACACCGCCAAGG
ACAGCGAATTCCACCGGATCACCTGCTTCAACGGCCTCGGCCAGAATGTGGCCAAGTATTGCACCAAGGGCCAACTCGTG
ACGGTCGAAGGGCGCATCCACTACACCCAGTGGGAAGATCAGAGCGGCACCAAGCGCTACGGCTGCGAGATCATCGCCGA
CAAGGTCGACTTCCTCACCAAGGGCCGCTCCGGCAGCAACGAGGGGGCTCCCGATATCGATGAGGACTGA

Upstream 100 bases:

>100_bases
ACCAGTTCCGGGTTTCCCTTCGGTGCGCTTCGCCGCGGGGCGCTTCTGCTCGGGTTTTGCAGCCGGGATGGCCCCGGATT
GCTCGATCAGGAGAAAGCCC

Downstream 100 bases:

>100_bases
ATGTCCTTCCCTCACGACAAGGCCCCGGTGGCAGACGCCACCGGGGCCTTTTCTTTTATACGCCTGCGATGCGGCGGCGC
GGGGCATGGAACCCCTTGCC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTNLVILVGRIARDPETRTTQGGTSITSISVVTDRPARKDGKTYKDENGYTAKDSEFHRITCFNGLGQNVAKYCTKGQLV
TVEGRIHYTQWEDQSGTKRYGCEIIADKVDFLTKGRSGSNEGAPDIDED

Sequences:

>Translated_129_residues
MTNLVILVGRIARDPETRTTQGGTSITSISVVTDRPARKDGKTYKDENGYTAKDSEFHRITCFNGLGQNVAKYCTKGQLV
TVEGRIHYTQWEDQSGTKRYGCEIIADKVDFLTKGRSGSNEGAPDIDED
>Mature_128_residues
TNLVILVGRIARDPETRTTQGGTSITSISVVTDRPARKDGKTYKDENGYTAKDSEFHRITCFNGLGQNVAKYCTKGQLVT
VEGRIHYTQWEDQSGTKRYGCEIIADKVDFLTKGRSGSNEGAPDIDED

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=107, Percent_Identity=31.7757009345794, Blast_Score=71, Evalue=3e-14,
Organism=Drosophila melanogaster, GI85725234, Length=111, Percent_Identity=36.036036036036, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24647376, Length=111, Percent_Identity=36.036036036036, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 14266; Mature: 14135

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLVILVGRIARDPETRTTQGGTSITSISVVTDRPARKDGKTYKDENGYTAKDSEFHRI
CCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
TCFNGLGQNVAKYCTKGQLVTVEGRIHYTQWEDQSGTKRYGCEIIADKVDFLTKGRSGSN
EEECCCCHHHHHHHCCCCEEEEECEEEEEECCCCCCCCCCCEEEEECHHHHHHCCCCCCC
EGAPDIDED
CCCCCCCCC
>Mature Secondary Structure 
TNLVILVGRIARDPETRTTQGGTSITSISVVTDRPARKDGKTYKDENGYTAKDSEFHRI
CCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
TCFNGLGQNVAKYCTKGQLVTVEGRIHYTQWEDQSGTKRYGCEIIADKVDFLTKGRSGSN
EEECCCCHHHHHHHCCCCEEEEECEEEEEECCCCCCCCCCCEEEEECHHHHHHCCCCCCC
EGAPDIDED
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]