Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200170

Identifier: 87200170

GI number: 87200170

Start: 2294394

End: 2294855

Strand: Reverse

Name: 87200170

Synonym: Saro_2154

Alternate gene names: NA

Gene position: 2294855-2294394 (Counterclockwise)

Preceding gene: 87200186

Following gene: 87200169

Centisome position: 64.43

GC content: 62.12

Gene sequence:

>462_bases
ATGCACCCAACCCCATCAACGACCGGCCAGGCTAATCACAGCCTCGCACGCATCCTCGCTCACGCTGTTGAAGCGGCTGA
CAAACCGAAACACCAGATCGCCCGCGAGGTCGGCATGCACAGGGAGACATTGCTGCGGGTCATGCGCGGCGAACGGCCGA
TAGGGCTTGATGAAGCCGCTTGCATTCTCGTCGTTTGCGGGGCGTTCCCCCGCGCCAGCATGATCCTCGCCCTCGCCGGG
CAAGAAGATTTGGCGTGCGAGTGGATGCGCAGCGAGATGGGCGAGTTTCTCGAGGAATTCTTCAGCGCCCTGCCGGGCCA
CCTTGATCGAACTCTGGGCCGTAGGGTCGCGGATTTGAGGCCACGCTGGGCGAATGGCACTTCGCAGCTCGTCGCGCGCA
TGCTGGCCAAACACATCGACGACTTTGCCAACCGCGACATAGCGATGTCGTTGCCAAGATGA

Upstream 100 bases:

>100_bases
CCTACAAACGAGAAGTTCTGTATATGTTCTTTTCATTTTCCTACATGCGCGGGGGCAGGTTATGGCTGCGACTCATCCCA
GCCAATGAGGAGAATCGGCC

Downstream 100 bases:

>100_bases
TCCGAAGCCTCGGAGGGGACCGAGATTTGCCAAGACAGGAATGACGAATGACCGCTGCCCCCTCGAACGAAGCCACCTCT
CCGCACTCTAACGAGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MHPTPSTTGQANHSLARILAHAVEAADKPKHQIAREVGMHRETLLRVMRGERPIGLDEAACILVVCGAFPRASMILALAG
QEDLACEWMRSEMGEFLEEFFSALPGHLDRTLGRRVADLRPRWANGTSQLVARMLAKHIDDFANRDIAMSLPR

Sequences:

>Translated_153_residues
MHPTPSTTGQANHSLARILAHAVEAADKPKHQIAREVGMHRETLLRVMRGERPIGLDEAACILVVCGAFPRASMILALAG
QEDLACEWMRSEMGEFLEEFFSALPGHLDRTLGRRVADLRPRWANGTSQLVARMLAKHIDDFANRDIAMSLPR
>Mature_153_residues
MHPTPSTTGQANHSLARILAHAVEAADKPKHQIAREVGMHRETLLRVMRGERPIGLDEAACILVVCGAFPRASMILALAG
QEDLACEWMRSEMGEFLEEFFSALPGHLDRTLGRRVADLRPRWANGTSQLVARMLAKHIDDFANRDIAMSLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16991; Mature: 16991

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPTPSTTGQANHSLARILAHAVEAADKPKHQIAREVGMHRETLLRVMRGERPIGLDEAA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHH
CILVVCGAFPRASMILALAGQEDLACEWMRSEMGEFLEEFFSALPGHLDRTLGRRVADLR
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PRWANGTSQLVARMLAKHIDDFANRDIAMSLPR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHPTPSTTGQANHSLARILAHAVEAADKPKHQIAREVGMHRETLLRVMRGERPIGLDEAA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHH
CILVVCGAFPRASMILALAGQEDLACEWMRSEMGEFLEEFFSALPGHLDRTLGRRVADLR
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PRWANGTSQLVARMLAKHIDDFANRDIAMSLPR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA