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The map label for this gene is cnrR [H]

Identifier: 87200154

GI number: 87200154

Start: 2277928

End: 2278368

Strand: Reverse

Name: cnrR [H]

Synonym: Saro_2138

Alternate gene names: 87200154

Gene position: 2278368-2277928 (Counterclockwise)

Preceding gene: 87200155

Following gene: 87200153

Centisome position: 63.97

GC content: 59.86

Gene sequence:

>441_bases
GTGAATTGGACCAGGCGGCTGATCCTGATCGCGTTTGTCGCATTCGCGGCGGCGCTGGGCGGAACTTATGCTGGCCGCGT
CCTGTTCGCACCGGAAAGGCAGAGCGAGACCGAACTCCATGCGCTGCTGCACAGCGAGCTTGAACTCGATGCCGCACAGG
AAGCAAAGATCGAAGCAATCGAGCAGCGTTTTGCCACCCGCCGCAAGGCGCTTGAGCTCGAGATGCGGGCGGCCAATGCC
CACCTGGCCGAAGCGATGGAAGTGGAACATGGTTATGGTCCGGAAGTCACGGCCGCGATCGATCATACTCACAAGGTGAT
GGGTGAGATGCAAAAGGAGACGCTTGAGCATCTCTTTGCCATGCGCGCCGTCCTGAGGCCTGATCAGGCGGTCAAATTCG
ACAGGACTGTGACCAGAGCCCTGACCCCAGAAGTACGGTGA

Upstream 100 bases:

>100_bases
GTGGTGGACTGGCGGGCGGCGAACCCGCCACAGCTCAGCCAATCTCACCCTTTGCGCCCGACAATCCCCTCGCACCTTCG
ACCTTGCTGGATGTCCACCC

Downstream 100 bases:

>100_bases
GCCTTTCGCTGTCAGAGGGGAGCGACGGCGAATTGGCCGCACTGGCGCTCGCTGGTCGGCAAGACGCCTATCGCGAACTG
CTGGCGCGCCACCGTGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNWTRRLILIAFVAFAAALGGTYAGRVLFAPERQSETELHALLHSELELDAAQEAKIEAIEQRFATRRKALELEMRAANA
HLAEAMEVEHGYGPEVTAAIDHTHKVMGEMQKETLEHLFAMRAVLRPDQAVKFDRTVTRALTPEVR

Sequences:

>Translated_146_residues
MNWTRRLILIAFVAFAAALGGTYAGRVLFAPERQSETELHALLHSELELDAAQEAKIEAIEQRFATRRKALELEMRAANA
HLAEAMEVEHGYGPEVTAAIDHTHKVMGEMQKETLEHLFAMRAVLRPDQAVKFDRTVTRALTPEVR
>Mature_146_residues
MNWTRRLILIAFVAFAAALGGTYAGRVLFAPERQSETELHALLHSELELDAAQEAKIEAIEQRFATRRKALELEMRAANA
HLAEAMEVEHGYGPEVTAAIDHTHKVMGEMQKETLEHLFAMRAVLRPDQAVKFDRTVTRALTPEVR

Specific function: CnrH alone is able to activate cnr expression, while both CnrY and CrnR (CnrX) are needed for nickel induction of CnrH (PubMed:10671463). Has been suggested (PubMed:10671464) to bind nickel [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.xylosoxydans nccX [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16447; Mature: 16447

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWTRRLILIAFVAFAAALGGTYAGRVLFAPERQSETELHALLHSELELDAAQEAKIEAI
CCHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EQRFATRRKALELEMRAANAHLAEAMEVEHGYGPEVTAAIDHTHKVMGEMQKETLEHLFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MRAVLRPDQAVKFDRTVTRALTPEVR
HHHHHCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNWTRRLILIAFVAFAAALGGTYAGRVLFAPERQSETELHALLHSELELDAAQEAKIEAI
CCHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EQRFATRRKALELEMRAANAHLAEAMEVEHGYGPEVTAAIDHTHKVMGEMQKETLEHLFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MRAVLRPDQAVKFDRTVTRALTPEVR
HHHHHCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8380802; 10671463; 10671464 [H]