| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200068
Identifier: 87200068
GI number: 87200068
Start: 2193628
End: 2194191
Strand: Direct
Name: 87200068
Synonym: Saro_2052
Alternate gene names: NA
Gene position: 2193628-2194191 (Clockwise)
Preceding gene: 87200067
Following gene: 87200071
Centisome position: 61.59
GC content: 66.84
Gene sequence:
>564_bases ATGAACGGCTTTCGCTTCTATCATCTTCTGTTTGCGGGCGGCGTTGCGCTCGCCTGGCTTACCGCTGAATCGCTGGGGCT CGTCCACGCATGGACCGGCTATGTCGTTGCTGCGCTGATTGGCCTGCGCCTGATCCTGTCGGCATTGGGCGCTCGCGGCT TCGACCTTGTGCGTCTCAAGCCAAGGTTCGCCACCGCGCCCCGCGGACAGGGCGGCCTGCGCCATCCCGCAATCGGCAGG CTGCTGACGCTCGCGCTGCTTGCCGCCGTCGCGACAACCGCCACGACCGGGATCGTCATGGACAAGGGCGGGACGCTGTT CGGCCAAAGCATCCGCGCGAAGGACGAGGAGCGCCGCGAGGAACGCGAACACGCTTCCGCCCGCCAGGACGACGGCGAAG AAGAGGGCGAAGGCGAGGACGAAGAGGGCCTGCTCGGCGAAATCCACGAAACGACCGGCAACGCGCTGCTGCCGCTCGTT TCGCTGCATGCGCTATGGCTGCTGTTCTTCAGGCTGGATCTGGCGCGCTTCGTGCTGTTCCTGCCGCGCCGCCGCCCCGC ATGA
Upstream 100 bases:
>100_bases CGCAAGGAAGTTCACGCAAGCTTCGCTTGATGATGCAAGTCAAGGAAATGACCGCACGAATTGCTAGGCCGCTCGGCAGA GGGGCAAGAAAGGCAACTCG
Downstream 100 bases:
>100_bases CCGGAGCGGCACGCGCACGCCTTACTCGGTAAGGTCGGTCCAGGCGTCCTTGATCCGTTCGAAGAAGCCCTTCGACTGGG GGCATTCCTCGCCGGTCTCG
Product: cytochrome B561
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLKPRFATAPRGQGGLRHPAIGR LLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERREEREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLV SLHALWLLFFRLDLARFVLFLPRRRPA
Sequences:
>Translated_187_residues MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLKPRFATAPRGQGGLRHPAIGR LLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERREEREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLV SLHALWLLFFRLDLARFVLFLPRRRPA >Mature_187_residues MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLKPRFATAPRGQGGLRHPAIGR LLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERREEREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLV SLHALWLLFFRLDLARFVLFLPRRRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20408; Mature: 20408
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC PRFATAPRGQGGLRHPAIGRLLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERRE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHCCHHHHHH EREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLVSLHALWLLFFRLDLARFVLF HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LPRRRPA HCCCCCC >Mature Secondary Structure MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC PRFATAPRGQGGLRHPAIGRLLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERRE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHCCHHHHHH EREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLVSLHALWLLFFRLDLARFVLF HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LPRRRPA HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA