| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is pyrG
Identifier: 87200033
GI number: 87200033
Start: 2149283
End: 2150914
Strand: Reverse
Name: pyrG
Synonym: Saro_2017
Alternate gene names: 87200033
Gene position: 2150914-2149283 (Counterclockwise)
Preceding gene: 87200034
Following gene: 87200032
Centisome position: 60.39
GC content: 65.38
Gene sequence:
>1632_bases ATGGCGCGGTACATATTCATCACCGGCGGCGTGGTTTCCTCGCTCGGCAAGGGACTCATGGCAGCGAGCCTCGCGGCTCT GTTGCAGGCACGCGGATTTCGCGTGCGCATCCGCAAGTTCGACCCCTATCTGAACGTCGATCCGGGGACGATGAGCCCCT ATCAGCACGGCGAGGTCTACGTGACCGACGACGGCGCCGAGACCGACCTCGACCTCGGCCACTACGAACGCTTCACCGGC GTTTCGGCGCGGCAGGCGGACAACATCACTTCGGGCCGCATCTATCGCGATATCATCACGAAGGAGCGGCGCGGCGACTA TCTCGGCGCGACGGTCCAGGTGATTCCGCACGTGACCGATGCGATCAAGGACTTCGCCCAGGCCGAGACCGAGGATCTCG ACTTCGTGCTGTGCGAGATCGGCGGCACCGTGGGCGACATCGAGGGTCTGCCCTTCATCGAGGCGCTGCGTCAGCTCCAC AACGAGCTTGACCGCGACCAGACCTGTTTCGTCCACGTGACGCTGGTGCCCTACATCGCGGCGGCGGGCGAGCTGAAGAC CAAGCCGACCCAGCATTCCGTGCGCGAACTGACCGGGCTTGGCATCCAGCCGGACATCCTGCTTTGCCGCTGCGAGAAGC CGCTTCCGGAGGGTGAGCGCGCCAAGATCGCGCAGTTCTGCAACGTGCGCAAATCGGCGGTCATTCCCGCGCTCGACGCT TCGAGCATCTATGCGGTGCCGTTGCAGTATCACGCCGAGGGGCTGGACGGCGAAGTGCTGCGCCACTTCGGCCTGACCGC TCCGGACCCGGACCTGGCGCGGTGGGAAGACATCGTCGACCGCTACCAGAACCCCGAGGGCGAAGTGACGATCGGCGTGG TCGGCAAGTATGTCGGCCTGCAGGACGCCTACAAGTCGCTCAACGAGGCGCTGGCGCATGGCGGCATGGCCAATCGCGTC AAGGTGCGGGTCAAGTGGCTCGACGCCGAGCTTTTCGAGAAGGGCGACGACGAGATCGCCGCGCAGCTCGAGCCGATGCA CGGCATTCTCGTGCCCGGCGGCTTCGGCGAGCGCGGGACCGAAGGCAAGATCGCCTCGGTGCGCTTTGCGCGCGAACGCA AGGTGCCGTTCTTCGGCATCTGCCTCGGCATGCAGATGGCCTGCGTCGAGGGGGCCCGCAACACGGCGGGGATCGCGGGC GCTTCGTCGACAGAGTTCGGGCCGACCGACGAGCCGGTCGTGGGCATCATCACCGAGTGGATGACCGCCGAAGGGCTTGA GAAACGCTCCGAAGGCGGGGATCTGGGCGGCACCATGCGCCTGGGCGCGTATGAGGCGCACCTTGCAGGCAACAGTCACG TCGCCAACATCTATGGCAGCACCGTGATCAGCGAACGGCATCGCCACCGCTACGAAGTGAACGTCGCCTACAAGGAACGG CTGGAAAAGGGCGGGCTGGTGTTTTCGGGCATGTCGCCCGACGGACTGCTCCCCGAGATCGTGGAGCGTCCCGACCATCC GTGGTTCATCGGTGTGCAGTTCCATCCCGAACTGAAGAGCCGTCCGTTCGAGCCGCACCCGCTGTTCAAGGGGTTCATCG CGGCCGCAGTCAAGCAGGCGCGTCTGGTTTAA
Upstream 100 bases:
>100_bases GCTTTCGTGTTGTTTTCGATACCCGCTTGTGGATTGCCGCAAAGATTACAGCGGCAACCGCTTGCGTTCATGCAACCTCT GACGCTAAGGCCCGACTCCC
Downstream 100 bases:
>100_bases AAAACGTGAAGGGGCTGGCCAGAGCCCCGGTTTGCTGATTATTTGCCGCCGGCCGCGGCTGTCGCGGCAGGGGGCGAGAC GGCGATGGACGCGGCGAGGC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MARYIFITGGVVSSLGKGLMAASLAALLQARGFRVRIRKFDPYLNVDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFTG VSARQADNITSGRIYRDIITKERRGDYLGATVQVIPHVTDAIKDFAQAETEDLDFVLCEIGGTVGDIEGLPFIEALRQLH NELDRDQTCFVHVTLVPYIAAAGELKTKPTQHSVRELTGLGIQPDILLCRCEKPLPEGERAKIAQFCNVRKSAVIPALDA SSIYAVPLQYHAEGLDGEVLRHFGLTAPDPDLARWEDIVDRYQNPEGEVTIGVVGKYVGLQDAYKSLNEALAHGGMANRV KVRVKWLDAELFEKGDDEIAAQLEPMHGILVPGGFGERGTEGKIASVRFARERKVPFFGICLGMQMACVEGARNTAGIAG ASSTEFGPTDEPVVGIITEWMTAEGLEKRSEGGDLGGTMRLGAYEAHLAGNSHVANIYGSTVISERHRHRYEVNVAYKER LEKGGLVFSGMSPDGLLPEIVERPDHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAVKQARLV
Sequences:
>Translated_543_residues MARYIFITGGVVSSLGKGLMAASLAALLQARGFRVRIRKFDPYLNVDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFTG VSARQADNITSGRIYRDIITKERRGDYLGATVQVIPHVTDAIKDFAQAETEDLDFVLCEIGGTVGDIEGLPFIEALRQLH NELDRDQTCFVHVTLVPYIAAAGELKTKPTQHSVRELTGLGIQPDILLCRCEKPLPEGERAKIAQFCNVRKSAVIPALDA SSIYAVPLQYHAEGLDGEVLRHFGLTAPDPDLARWEDIVDRYQNPEGEVTIGVVGKYVGLQDAYKSLNEALAHGGMANRV KVRVKWLDAELFEKGDDEIAAQLEPMHGILVPGGFGERGTEGKIASVRFARERKVPFFGICLGMQMACVEGARNTAGIAG ASSTEFGPTDEPVVGIITEWMTAEGLEKRSEGGDLGGTMRLGAYEAHLAGNSHVANIYGSTVISERHRHRYEVNVAYKER LEKGGLVFSGMSPDGLLPEIVERPDHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAVKQARLV >Mature_542_residues ARYIFITGGVVSSLGKGLMAASLAALLQARGFRVRIRKFDPYLNVDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFTGV SARQADNITSGRIYRDIITKERRGDYLGATVQVIPHVTDAIKDFAQAETEDLDFVLCEIGGTVGDIEGLPFIEALRQLHN ELDRDQTCFVHVTLVPYIAAAGELKTKPTQHSVRELTGLGIQPDILLCRCEKPLPEGERAKIAQFCNVRKSAVIPALDAS SIYAVPLQYHAEGLDGEVLRHFGLTAPDPDLARWEDIVDRYQNPEGEVTIGVVGKYVGLQDAYKSLNEALAHGGMANRVK VRVKWLDAELFEKGDDEIAAQLEPMHGILVPGGFGERGTEGKIASVRFARERKVPFFGICLGMQMACVEGARNTAGIAGA SSTEFGPTDEPVVGIITEWMTAEGLEKRSEGGDLGGTMRLGAYEAHLAGNSHVANIYGSTVISERHRHRYEVNVAYKERL EKGGLVFSGMSPDGLLPEIVERPDHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAVKQARLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=561, Percent_Identity=45.9893048128342, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI28559085, Length=555, Percent_Identity=43.4234234234234, Blast_Score=467, Evalue=1e-131, Organism=Homo sapiens, GI28559083, Length=555, Percent_Identity=43.4234234234234, Blast_Score=467, Evalue=1e-131, Organism=Homo sapiens, GI221316689, Length=555, Percent_Identity=43.4234234234234, Blast_Score=467, Evalue=1e-131, Organism=Escherichia coli, GI1789142, Length=537, Percent_Identity=57.3556797020484, Blast_Score=606, Evalue=1e-174, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=36.6174055829228, Blast_Score=401, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=41.5789473684211, Blast_Score=432, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319432, Length=567, Percent_Identity=40.3880070546737, Blast_Score=416, Evalue=1e-117, Organism=Drosophila melanogaster, GI24664469, Length=557, Percent_Identity=44.524236983842, Blast_Score=456, Evalue=1e-128, Organism=Drosophila melanogaster, GI21357815, Length=503, Percent_Identity=43.5387673956262, Blast_Score=390, Evalue=1e-108,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_NOVAD (Q2G6R7)
Other databases:
- EMBL: CP000248 - RefSeq: YP_497290.1 - HSSP: P17812 - ProteinModelPortal: Q2G6R7 - SMR: Q2G6R7 - STRING: Q2G6R7 - GeneID: 3917338 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_2017 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - PhylomeDB: Q2G6R7 - ProtClustDB: PRK05380 - BioCyc: NARO279238:SARO_2017-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 59507; Mature: 59376
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 381-381 ACT_SITE 515-515 ACT_SITE 517-517
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYIFITGGVVSSLGKGLMAASLAALLQARGFRVRIRKFDPYLNVDPGTMSPYQHGEVY CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGVSARQADNITSGRIYRDIITKERRGDYLGATVQVIPHVTD EECCCCCCCCCCCHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIKDFAQAETEDLDFVLCEIGGTVGDIEGLPFIEALRQLHNELDRDQTCFVHVTLVPYIA HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHH AAGELKTKPTQHSVRELTGLGIQPDILLCRCEKPLPEGERAKIAQFCNVRKSAVIPALDA HCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHCCCCCCC SSIYAVPLQYHAEGLDGEVLRHFGLTAPDPDLARWEDIVDRYQNPEGEVTIGVVGKYVGL CCEEEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCH QDAYKSLNEALAHGGMANRVKVRVKWLDAELFEKGDDEIAAQLEPMHGILVPGGFGERGT HHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHCCCHHHHHHCCCCCEEEECCCCCCCCC EGKIASVRFARERKVPFFGICLGMQMACVEGARNTAGIAGASSTEFGPTDEPVVGIITEW CCCEEEEEEHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH MTAEGLEKRSEGGDLGGTMRLGAYEAHLAGNSHVANIYGSTVISERHRHRYEVNVAYKER HHHHHHHHHCCCCCCCCEEEECCEEEEECCCCEEEHHHHHHHHHHHHCCEEEEEEHHHHH LEKGGLVFSGMSPDGLLPEIVERPDHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAVKQA HHHCCEEEECCCCCCCCHHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHH RLV CCC >Mature Secondary Structure ARYIFITGGVVSSLGKGLMAASLAALLQARGFRVRIRKFDPYLNVDPGTMSPYQHGEVY CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGVSARQADNITSGRIYRDIITKERRGDYLGATVQVIPHVTD EECCCCCCCCCCCHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIKDFAQAETEDLDFVLCEIGGTVGDIEGLPFIEALRQLHNELDRDQTCFVHVTLVPYIA HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHH AAGELKTKPTQHSVRELTGLGIQPDILLCRCEKPLPEGERAKIAQFCNVRKSAVIPALDA HCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHCCCCCCC SSIYAVPLQYHAEGLDGEVLRHFGLTAPDPDLARWEDIVDRYQNPEGEVTIGVVGKYVGL CCEEEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCH QDAYKSLNEALAHGGMANRVKVRVKWLDAELFEKGDDEIAAQLEPMHGILVPGGFGERGT HHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHCCCHHHHHHCCCCCEEEECCCCCCCCC EGKIASVRFARERKVPFFGICLGMQMACVEGARNTAGIAGASSTEFGPTDEPVVGIITEW CCCEEEEEEHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH MTAEGLEKRSEGGDLGGTMRLGAYEAHLAGNSHVANIYGSTVISERHRHRYEVNVAYKER HHHHHHHHHCCCCCCCCEEEECCEEEEECCCCEEEHHHHHHHHHHHHCCEEEEEEHHHHH LEKGGLVFSGMSPDGLLPEIVERPDHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAVKQA HHHCCEEEECCCCCCCCHHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHH RLV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA