| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is divL [H]
Identifier: 87200018
GI number: 87200018
Start: 2134947
End: 2137295
Strand: Reverse
Name: divL [H]
Synonym: Saro_2002
Alternate gene names: 87200018
Gene position: 2137295-2134947 (Counterclockwise)
Preceding gene: 87200019
Following gene: 87200017
Centisome position: 60.01
GC content: 68.71
Gene sequence:
>2349_bases ATGCCTCTGCTCAACCAGACCGCGCTGGTCCTGATCGGACTGCTGCTTGCCGCGTGGACGGTTGGCGCGGGCTGGCTCGT ACTCGACGCACGGCGGCGCGCGCGGCGCGGCGAGGCGTTGCAACGGCAGGCGCGCAGGCTTGCGCGGATGGTGGACGAAT CTCCCGCCCTGCCACTGCTGGTCCGCGCCGACGGGAGGATCGAAGGACCCGCGCGCCTGGCCCTGTGGCTCGGTTTCGAG GCGATGCCCGGCTATCTTTCAGAACTCGACGCCGGCGACCATGGCCTCGACGAAGTTGAGCTGGCCCGGCTTGGCGATGC GGTGCGACGGGCGCAGAAGACCGGCACGCCGTTCCGCATGGCGCTTACCCCAAGGGGCGGCTCGCGCAGTCTGTGCGCGC AGGGTCACCTGGCCGATCCGCAGGTCTCGCCGGGCGGGGCCGCGCTCGTCTGGTTCTTCGACGTTTCCGAAAGCGAGGAG GAACTGGTCGCGCTGCGGGCCGAGACGCGCAAGGCCAAGTCGGATTTCGCCGGGCTTTCGGGCCTGATCGAGGCCGCGCC CTTGCCGATGTGGTTCCGCGGCCCTGACTTGCGCCTGCGCCTGGTGAACAGCGCCTATGTCGCTGCCGTGGGCGCCGAGA GCGCGGACCAGGTGATCGCGCAGGGTATCGAACTGATCGAGCCGGTAGAGGGGCTGTCCGCCGCGCAGGTCGCCCGGCAA GCCCATTCGCGCAAGGTCTCCATCGAACGGTCCCTGCTGGCGACGATCAAGGGCCAGCGCCGCGCGGTGCGGGTGACCGA CCTTCCGCTTGGCGACGAGGGGGTGGCCGGTTACGTCGTAGACATCGAGGAAATGGAGGAACTGATCCGCCAGTTCCGCC GGTTCCGCGAGGCGCAGCGCGAGATGCTGGATACGCTTTCCGCCGGGATCGCGCAGTTCGACGAGAAGCGGAACCTCGTT TTCGCCAACCAGCCATTCCTGCGCATCTTCTCGGTCCCGCAGGCGTGGGTGGTGGACACGCCGCCGTTCGACCGCGTGCT GGACCGGATGCGCGACGCGGGCCGCCTGCCTGAAGTGCGCGACTTTCCGGAATGGCGCCGCGAGCGGCAGGGATGGTTCC TTGCCCGCGAGCCGATCGAGGAGCCCTGGCACCTTTCGGACGGTACGCACCTGCGCGTCGTCGGCCAGCCCATGCCGGAC GGCGGGTTGCTGATGATCTTCGAGGACCGCACCGAGCAGCTCCAGCTTTCGGCAACTCGCGACACGCTGCTGCGCACGCG TACGGCCACTTTCGACAACCTGTTCGAATCGCTCGCCGTATTCGCGCCAGACGGCCGGTTGCAGCTCTGGAACCGCCGGT TTGCGGCTGACTGGGGGCTCGACGAGGAGTTCCTGGCAACGCATCCCCGTGCCGACGTCCTGCTCAGCCGCATTGCCGAC CAGCTCAAACGGCCCGCGCAAGTTGGCACGGTGGCGCAGGTCATCCAGGGGGCGACGCTGGAGCGCAAGCAGCGCAGTGG CAGGTTGGCGCTGGCTGACGGGCGGCATCTGGCGCTGGCCGGCGTGCCATTGCCGGATGGAAACGGCCTGCTGACCGTGC TCGACATCACCGACAGCCAGAAGGCCGAGGCGGCGCTGCGCGAACGGAACGCCGCGCTGGTCGAGGCGGACGCGGTCAAG ACGCGCTTCATCGCCAACATGAGCTATGAATTCCGGACGCCGCTGACGTCCATCGGCGGCTTTGCGGAACTGCTTCAGAG CGGCATCGCCGGCGATCTGACCGAGCAGCAGAACGAATACGTCGAGGCGATTCTCACGTCGGTAGAGCGCCTGGGCGAGC AGATCGAGAACGTGCTGGACCTCTCGCAGAGCGAGGCCGGAACGCTGCCGCTGGCGCAGGAACCGGTGGAGATTTTCCCG CTCCTGACCGATGTGGTGACCGAACGCACCGAGCGCCTTGCCGGTGCCGGCATCACGCTCGATCTGAGGGGCGACAGGTC CGCAGGCATGGTAACGGGCGATGCGCGGCGGCTGCGGCGCGCTTTCGGCCAGCTCATCGACAATGCGATTGCGGCAACGC CCGAGGGCGGGCGCATCCTGGTCGAGGCGTCGCGCAAGAAGGGCGGAGCGCTCCAGGTCGTCGTTTCGGACAACGGGCGC GGGATGGAGCCGGCCGTGCTGGCGCGGGCGCTCGACGGCCTGAAGGTCAGCGCGGATGGCAAGGCGGTCGAACGGCGGCA GGGATTGGGGCTTCCGCTGGTCCGCCAACTGGTCGAGGCGCACGGCGGAAACCTGGAGCTGATGTCCGAGCCGGGGCTGG GCACGAGCGCGATCGTGATGCTGCCGTGA
Upstream 100 bases:
>100_bases CTCTCTTTTCGTGTACATCGGGCGTCCGTTGTCCCCGCAATGCACGGCAATGTAATTCGCCGCATTGAAATTCCGGGGGG CACGCCGTAGCGAAAGCGTG
Downstream 100 bases:
>100_bases TCGTCGACCTGCCGGACCTTGCCTCGTCGGAGGCGCTTGCGCGCAGGATCGCCGCGGCCTTGCGTCCGGGTGACGTGGTC GCCCTTTCCGGGGGGCTGGG
Product: PAS/PAC sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 782; Mature: 781
Protein sequence:
>782_residues MPLLNQTALVLIGLLLAAWTVGAGWLVLDARRRARRGEALQRQARRLARMVDESPALPLLVRADGRIEGPARLALWLGFE AMPGYLSELDAGDHGLDEVELARLGDAVRRAQKTGTPFRMALTPRGGSRSLCAQGHLADPQVSPGGAALVWFFDVSESEE ELVALRAETRKAKSDFAGLSGLIEAAPLPMWFRGPDLRLRLVNSAYVAAVGAESADQVIAQGIELIEPVEGLSAAQVARQ AHSRKVSIERSLLATIKGQRRAVRVTDLPLGDEGVAGYVVDIEEMEELIRQFRRFREAQREMLDTLSAGIAQFDEKRNLV FANQPFLRIFSVPQAWVVDTPPFDRVLDRMRDAGRLPEVRDFPEWRRERQGWFLAREPIEEPWHLSDGTHLRVVGQPMPD GGLLMIFEDRTEQLQLSATRDTLLRTRTATFDNLFESLAVFAPDGRLQLWNRRFAADWGLDEEFLATHPRADVLLSRIAD QLKRPAQVGTVAQVIQGATLERKQRSGRLALADGRHLALAGVPLPDGNGLLTVLDITDSQKAEAALRERNAALVEADAVK TRFIANMSYEFRTPLTSIGGFAELLQSGIAGDLTEQQNEYVEAILTSVERLGEQIENVLDLSQSEAGTLPLAQEPVEIFP LLTDVVTERTERLAGAGITLDLRGDRSAGMVTGDARRLRRAFGQLIDNAIAATPEGGRILVEASRKKGGALQVVVSDNGR GMEPAVLARALDGLKVSADGKAVERRQGLGLPLVRQLVEAHGGNLELMSEPGLGTSAIVMLP
Sequences:
>Translated_782_residues MPLLNQTALVLIGLLLAAWTVGAGWLVLDARRRARRGEALQRQARRLARMVDESPALPLLVRADGRIEGPARLALWLGFE AMPGYLSELDAGDHGLDEVELARLGDAVRRAQKTGTPFRMALTPRGGSRSLCAQGHLADPQVSPGGAALVWFFDVSESEE ELVALRAETRKAKSDFAGLSGLIEAAPLPMWFRGPDLRLRLVNSAYVAAVGAESADQVIAQGIELIEPVEGLSAAQVARQ AHSRKVSIERSLLATIKGQRRAVRVTDLPLGDEGVAGYVVDIEEMEELIRQFRRFREAQREMLDTLSAGIAQFDEKRNLV FANQPFLRIFSVPQAWVVDTPPFDRVLDRMRDAGRLPEVRDFPEWRRERQGWFLAREPIEEPWHLSDGTHLRVVGQPMPD GGLLMIFEDRTEQLQLSATRDTLLRTRTATFDNLFESLAVFAPDGRLQLWNRRFAADWGLDEEFLATHPRADVLLSRIAD QLKRPAQVGTVAQVIQGATLERKQRSGRLALADGRHLALAGVPLPDGNGLLTVLDITDSQKAEAALRERNAALVEADAVK TRFIANMSYEFRTPLTSIGGFAELLQSGIAGDLTEQQNEYVEAILTSVERLGEQIENVLDLSQSEAGTLPLAQEPVEIFP LLTDVVTERTERLAGAGITLDLRGDRSAGMVTGDARRLRRAFGQLIDNAIAATPEGGRILVEASRKKGGALQVVVSDNGR GMEPAVLARALDGLKVSADGKAVERRQGLGLPLVRQLVEAHGGNLELMSEPGLGTSAIVMLP >Mature_781_residues PLLNQTALVLIGLLLAAWTVGAGWLVLDARRRARRGEALQRQARRLARMVDESPALPLLVRADGRIEGPARLALWLGFEA MPGYLSELDAGDHGLDEVELARLGDAVRRAQKTGTPFRMALTPRGGSRSLCAQGHLADPQVSPGGAALVWFFDVSESEEE LVALRAETRKAKSDFAGLSGLIEAAPLPMWFRGPDLRLRLVNSAYVAAVGAESADQVIAQGIELIEPVEGLSAAQVARQA HSRKVSIERSLLATIKGQRRAVRVTDLPLGDEGVAGYVVDIEEMEELIRQFRRFREAQREMLDTLSAGIAQFDEKRNLVF ANQPFLRIFSVPQAWVVDTPPFDRVLDRMRDAGRLPEVRDFPEWRRERQGWFLAREPIEEPWHLSDGTHLRVVGQPMPDG GLLMIFEDRTEQLQLSATRDTLLRTRTATFDNLFESLAVFAPDGRLQLWNRRFAADWGLDEEFLATHPRADVLLSRIADQ LKRPAQVGTVAQVIQGATLERKQRSGRLALADGRHLALAGVPLPDGNGLLTVLDITDSQKAEAALRERNAALVEADAVKT RFIANMSYEFRTPLTSIGGFAELLQSGIAGDLTEQQNEYVEAILTSVERLGEQIENVLDLSQSEAGTLPLAQEPVEIFPL LTDVVTERTERLAGAGITLDLRGDRSAGMVTGDARRLRRAFGQLIDNAIAATPEGGRILVEASRKKGGALQVVVSDNGRG MEPAVLARALDGLKVSADGKAVERRQGLGLPLVRQLVEAHGGNLELMSEPGLGTSAIVMLP
Specific function: Required for cell division and growth. It catalyzes the phosphorylation of CtrA and activates transcription in vitro of the cell cycle-regulated fliF promoter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=278, Percent_Identity=29.4964028776978, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789149, Length=245, Percent_Identity=33.0612244897959, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI87081816, Length=239, Percent_Identity=35.1464435146443, Blast_Score=93, Evalue=6e-20, Organism=Escherichia coli, GI145693157, Length=263, Percent_Identity=28.8973384030418, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1788713, Length=254, Percent_Identity=27.1653543307087, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI48994928, Length=246, Percent_Identity=29.2682926829268, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=26.978417266187, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786783, Length=234, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=6e-15, Organism=Escherichia coli, GI1786912, Length=229, Percent_Identity=26.6375545851528, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI1788549, Length=238, Percent_Identity=22.2689075630252, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790436, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87082128, Length=227, Percent_Identity=25.9911894273128, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 85571; Mature: 85440
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLNQTALVLIGLLLAAWTVGAGWLVLDARRRARRGEALQRQARRLARMVDESPALPLL CCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCHHHHHHHHHHHHHHCCCCCCEEE VRADGRIEGPARLALWLGFEAMPGYLSELDAGDHGLDEVELARLGDAVRRAQKTGTPFRM EECCCCCCCCCEEEEEECCHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE ALTPRGGSRSLCAQGHLADPQVSPGGAALVWFFDVSESEEELVALRAETRKAKSDFAGLS EEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH GLIEAAPLPMWFRGPDLRLRLVNSAYVAAVGAESADQVIAQGIELIEPVEGLSAAQVARQ HHHHHCCCCEEECCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHH AHSRKVSIERSLLATIKGQRRAVRVTDLPLGDEGVAGYVVDIEEMEELIRQFRRFREAQR HHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH EMLDTLSAGIAQFDEKRNLVFANQPFLRIFSVPQAWVVDTPPFDRVLDRMRDAGRLPEVR HHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCC DFPEWRRERQGWFLAREPIEEPWHLSDGTHLRVVGQPMPDGGLLMIFEDRTEQLQLSATR CCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEHHHH DTLLRTRTATFDNLFESLAVFAPDGRLQLWNRRFAADWGLDEEFLATHPRADVLLSRIAD HHHHHHHHHHHHHHHHHHHEECCCCCEEHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH QLKRPAQVGTVAQVIQGATLERKQRSGRLALADGRHLALAGVPLPDGNGLLTVLDITDSQ HHHCCHHHHHHHHHHCCCHHHHHHHCCCEEEECCCEEEEEECCCCCCCCEEEEEECCCCH KAEAALRERNAALVEADAVKTRFIANMSYEFRTPLTSIGGFAELLQSGIAGDLTEQQNEY HHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH VEAILTSVERLGEQIENVLDLSQSEAGTLPLAQEPVEIFPLLTDVVTERTERLAGAGITL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE DLRGDRSAGMVTGDARRLRRAFGQLIDNAIAATPEGGRILVEASRKKGGALQVVVSDNGR EECCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCC GMEPAVLARALDGLKVSADGKAVERRQGLGLPLVRQLVEAHGGNLELMSEPGLGTSAIVM CCCHHHHHHHHCCCEEECCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEE LP EC >Mature Secondary Structure PLLNQTALVLIGLLLAAWTVGAGWLVLDARRRARRGEALQRQARRLARMVDESPALPLL CCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCHHHHHHHHHHHHHHCCCCCCEEE VRADGRIEGPARLALWLGFEAMPGYLSELDAGDHGLDEVELARLGDAVRRAQKTGTPFRM EECCCCCCCCCEEEEEECCHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE ALTPRGGSRSLCAQGHLADPQVSPGGAALVWFFDVSESEEELVALRAETRKAKSDFAGLS EEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH GLIEAAPLPMWFRGPDLRLRLVNSAYVAAVGAESADQVIAQGIELIEPVEGLSAAQVARQ HHHHHCCCCEEECCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHH AHSRKVSIERSLLATIKGQRRAVRVTDLPLGDEGVAGYVVDIEEMEELIRQFRRFREAQR HHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH EMLDTLSAGIAQFDEKRNLVFANQPFLRIFSVPQAWVVDTPPFDRVLDRMRDAGRLPEVR HHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCC DFPEWRRERQGWFLAREPIEEPWHLSDGTHLRVVGQPMPDGGLLMIFEDRTEQLQLSATR CCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEHHHH DTLLRTRTATFDNLFESLAVFAPDGRLQLWNRRFAADWGLDEEFLATHPRADVLLSRIAD HHHHHHHHHHHHHHHHHHHEECCCCCEEHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH QLKRPAQVGTVAQVIQGATLERKQRSGRLALADGRHLALAGVPLPDGNGLLTVLDITDSQ HHHCCHHHHHHHHHHCCCHHHHHHHCCCEEEECCCEEEEEECCCCCCCCEEEEEECCCCH KAEAALRERNAALVEADAVKTRFIANMSYEFRTPLTSIGGFAELLQSGIAGDLTEQQNEY HHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH VEAILTSVERLGEQIENVLDLSQSEAGTLPLAQEPVEIFPLLTDVVTERTERLAGAGITL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE DLRGDRSAGMVTGDARRLRRAFGQLIDNAIAATPEGGRILVEASRKKGGALQVVVSDNGR EECCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCC GMEPAVLARALDGLKVSADGKAVERRQGLGLPLVRQLVEAHGGNLELMSEPGLGTSAIVM CCCHHHHHHHHCCCEEECCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEE LP EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10557274; 11259647 [H]