| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is argJ
Identifier: 87200009
GI number: 87200009
Start: 2123244
End: 2124470
Strand: Direct
Name: argJ
Synonym: Saro_1993
Alternate gene names: 87200009
Gene position: 2123244-2124470 (Clockwise)
Preceding gene: 87200003
Following gene: 87200010
Centisome position: 59.62
GC content: 66.67
Gene sequence:
>1227_bases ATGTCCGACGCCGTTTCTCCGCTCGCCACGCCCTTTCCCGAACTGCCGGCCATCGCCGGCGTCACGCCGCGCGTCGCGCG CGCTGGATACAAGGACTGGGGCCGGTGCGACCTGACGTATGTCGAACTGTCGCAAGGCACTGCTGTCGCGGGCGTCTTCA CCCGCAACGTTTGCTGTTCCTCGGAAGTTGAGCTTGGCCGCGCGAACGTTGCCCGGGGCCGCGCACGGGCGCTGGTCGTG AATGCCGGCAACTCCAATGCCTTCACCGGCTATCGCGGGCGCGAGGCGGTGGAGCAGATCATGACGCAGGTCGCCGCAAA CCTCGGCTGCGCGCAGGAAGAGGTCTTCGTTTCCTCCACCGGCGTGATCGGCGTGCCCTTGCCCAAGGACAAGGCCAGGG CGGGCATCGAGGCGGCGCTGGCGGCCGATGAATGCACCTGGGAAGAGGCCGCGCGCACGATCGGTACGACCGACACCTTC CCCAAGGGAGCGTCCGCCAAGGCGCAGCTAGGTGCCGTTCAGGTACACTTCAGCGCAATCATAAAGGGAAGCGGCATGAT CGCACCCGACATGGCGACGATGCTCGGCTACGTCTTCACCGACGCAGCCGTAAGCCCTGAATTTCTTCAGGAATGCCTGT CTGCGGCCAACCGCCGCACCTTCTCGTGCATCACTGTCGACAGCGATACGTCAACCAGCGACACCGTCCTCGCTTTCGCC ACCGGCAAGGCCGGCAACGAGCCCCTGACCTCGTTCGACAGCCCCGGTGCCGATGCCTTCGCGGCCGCGCTGGAGGACAT CTGCCGCCAGCTTTCCCATCTCGTGGTCAAGGACGGCGAAGGCGCGCAGAAGTTCATCGCCGTCGCCGTCTCGGGCGCTG TCTCGGACGAGAGCGCCCGCAAGGTCGGCCTCGCCATCGCCAACTCGCCACTGGTCAAGACCGCAATCGCCGGCGAGGAT GCCAACTGGGGGCGCGTCGTCATGGCCGTGGGCAAGGCCGGCCAACCGGCAGACCGCGACCGCCTGTCCATTGGCTTCGG CGGTACCTGGGCCGCGCGCGACGGACAGCCGCTTGCCGACTACGACGAAGCGCCCGTCGCCGCGCATCTCAAGGGCCGGG AAATCTCGATCGAGGTAGATCTCGGCCTCGGCGATGGCAGGGCGACGGTCTGGACCTGCGACCTGACGCACGGCTACATC TCGATCAACGCCGACTATCGCAGTTGA
Upstream 100 bases:
>100_bases ACTGCTTGATCATGCACCCTTTCCAGCACAGACAAAACCAATTGGAAAGAGCGGCCCGCCAAACTTGAACCCTGCACCGC CGCGCGCTAGGCGGAGCACC
Downstream 100 bases:
>100_bases AAAGGCCCTCGCCGTGATCACACTCTGGGGCCGCCTGAACTCGCACAACGTGAAGAAGGTGGCGTGGGCGCTGATCGAGA TGGACCTGCCCCATCAGCGC
Product: bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
Products: NA
Alternate protein names: Glutamate N-acetyltransferase; Ornithine acetyltransferase; OATase; Ornithine transacetylase; Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS [H]
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MSDAVSPLATPFPELPAIAGVTPRVARAGYKDWGRCDLTYVELSQGTAVAGVFTRNVCCSSEVELGRANVARGRARALVV NAGNSNAFTGYRGREAVEQIMTQVAANLGCAQEEVFVSSTGVIGVPLPKDKARAGIEAALAADECTWEEAARTIGTTDTF PKGASAKAQLGAVQVHFSAIIKGSGMIAPDMATMLGYVFTDAAVSPEFLQECLSAANRRTFSCITVDSDTSTSDTVLAFA TGKAGNEPLTSFDSPGADAFAAALEDICRQLSHLVVKDGEGAQKFIAVAVSGAVSDESARKVGLAIANSPLVKTAIAGED ANWGRVVMAVGKAGQPADRDRLSIGFGGTWAARDGQPLADYDEAPVAAHLKGREISIEVDLGLGDGRATVWTCDLTHGYI SINADYRS
Sequences:
>Translated_408_residues MSDAVSPLATPFPELPAIAGVTPRVARAGYKDWGRCDLTYVELSQGTAVAGVFTRNVCCSSEVELGRANVARGRARALVV NAGNSNAFTGYRGREAVEQIMTQVAANLGCAQEEVFVSSTGVIGVPLPKDKARAGIEAALAADECTWEEAARTIGTTDTF PKGASAKAQLGAVQVHFSAIIKGSGMIAPDMATMLGYVFTDAAVSPEFLQECLSAANRRTFSCITVDSDTSTSDTVLAFA TGKAGNEPLTSFDSPGADAFAAALEDICRQLSHLVVKDGEGAQKFIAVAVSGAVSDESARKVGLAIANSPLVKTAIAGED ANWGRVVMAVGKAGQPADRDRLSIGFGGTWAARDGQPLADYDEAPVAAHLKGREISIEVDLGLGDGRATVWTCDLTHGYI SINADYRS >Mature_407_residues SDAVSPLATPFPELPAIAGVTPRVARAGYKDWGRCDLTYVELSQGTAVAGVFTRNVCCSSEVELGRANVARGRARALVVN AGNSNAFTGYRGREAVEQIMTQVAANLGCAQEEVFVSSTGVIGVPLPKDKARAGIEAALAADECTWEEAARTIGTTDTFP KGASAKAQLGAVQVHFSAIIKGSGMIAPDMATMLGYVFTDAAVSPEFLQECLSAANRRTFSCITVDSDTSTSDTVLAFAT GKAGNEPLTSFDSPGADAFAAALEDICRQLSHLVVKDGEGAQKFIAVAVSGAVSDESARKVGLAIANSPLVKTAIAGEDA NWGRVVMAVGKAGQPADRDRLSIGFGGTWAARDGQPLADYDEAPVAAHLKGREISIEVDLGLGDGRATVWTCDLTHGYIS INADYRS
Specific function: Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis:the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate [H]
COG id: COG1364
COG function: function code E; N-acetylglutamate synthase (N-acetylornithine aminotransferase)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgJ family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323707, Length=405, Percent_Identity=35.5555555555556, Blast_Score=236, Evalue=6e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002813 - InterPro: IPR016117 [H]
Pfam domain/function: PF01960 ArgJ [H]
EC number: =2.3.1.35; =2.3.1.1 [H]
Molecular weight: Translated: 42415; Mature: 42284
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVSPLATPFPELPAIAGVTPRVARAGYKDWGRCDLTYVELSQGTAVAGVFTRNVCCS CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCC SEVELGRANVARGRARALVVNAGNSNAFTGYRGREAVEQIMTQVAANLGCAQEEVFVSST CCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC GVIGVPLPKDKARAGIEAALAADECTWEEAARTIGTTDTFPKGASAKAQLGAVQVHFSAI CEEEECCCCHHHHCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCEEEEEEEEE IKGSGMIAPDMATMLGYVFTDAAVSPEFLQECLSAANRRTFSCITVDSDTSTSDTVLAFA EECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEE TGKAGNEPLTSFDSPGADAFAAALEDICRQLSHLVVKDGEGAQKFIAVAVSGAVSDESAR ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHEEEEEEEECCCCCCHHH KVGLAIANSPLVKTAIAGEDANWGRVVMAVGKAGQPADRDRLSIGFGGTWAARDGQPLAD EEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECCCCEECCCCCCCCCC YDEAPVAAHLKGREISIEVDLGLGDGRATVWTCDLTHGYISINADYRS CCCCCEEEEECCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEECCCC >Mature Secondary Structure SDAVSPLATPFPELPAIAGVTPRVARAGYKDWGRCDLTYVELSQGTAVAGVFTRNVCCS CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCC SEVELGRANVARGRARALVVNAGNSNAFTGYRGREAVEQIMTQVAANLGCAQEEVFVSST CCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC GVIGVPLPKDKARAGIEAALAADECTWEEAARTIGTTDTFPKGASAKAQLGAVQVHFSAI CEEEECCCCHHHHCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCEEEEEEEEE IKGSGMIAPDMATMLGYVFTDAAVSPEFLQECLSAANRRTFSCITVDSDTSTSDTVLAFA EECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEE TGKAGNEPLTSFDSPGADAFAAALEDICRQLSHLVVKDGEGAQKFIAVAVSGAVSDESAR ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHEEEEEEEECCCCCCHHH KVGLAIANSPLVKTAIAGEDANWGRVVMAVGKAGQPADRDRLSIGFGGTWAARDGQPLAD EEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECCCCEECCCCCCCCCC YDEAPVAAHLKGREISIEVDLGLGDGRATVWTCDLTHGYISINADYRS CCCCCEEEEECCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA