Click here to switch to the map view.

The map label for this gene is recG [H]

Identifier: 87199996

GI number: 87199996

Start: 2096600

End: 2098657

Strand: Reverse

Name: recG [H]

Synonym: Saro_1979

Alternate gene names: 87199996

Gene position: 2098657-2096600 (Counterclockwise)

Preceding gene: 87200000

Following gene: 87199994

Centisome position: 58.92

GC content: 65.16

Gene sequence:

>2058_bases
ATGCGTCCCGACCTGCTCAATCCACTGTTTGCCGAGGCCAGCAGCCTGAAGGGCGTTGGGCCTGGCCTCGCACGTCCTCT
GGAAAAGCTCGGCCTGACGCGGGTAAAGGATTTTGCCTACCACCTTCCCGATCGTTTCGTCCTGCGCCGCGCCATAGCGA
ATCTCGACGAGGCGAGCGTTGGCGAGCAGATCGTCGTTGCGCTCACACCTCGTGACTATCGTCAGTCCGCAGGCCGGGGG
CCGTTTCGCGTGATGGCTGAGGACGAAAGCGGCAGCTTCGTTGCACTGACCTATTTTGGCCGCGCTTCCTACACGGCCAA
GAAGCAGCTTCCGCTGGGCGAAAAACGATGGGTCGCCGGACGCCTCGATCAGTTCGGCCAGACCTGGCAAATCGTCCATC
CCGACCATGTGAGCGACGACAGCGCAGGGATGCTCGGCCAGTTGAACGAGCCTGTCTATCCGTTGTCCGAGGGGTTGACC
CAGGGGCGGTTGCAGGGGCTGGTGCACCAGTCGCTCGCACACTTGCCGCAGCTTCCAGAATGGATCGAGCCCGGTCTCGC
TCAGCGTATGGACTGGCCGGCATGGCATGAGGCGCTGCCCTTGGCGCACAAGGGCGAGCACAAGGCCGCGCGCGATCGGC
TCGCTTACGATGAATTGCTGGCCAACAGCCTTGCGCTCATCCTCGTGCGGGAAAGCAACCGCAGCCGGCAGGGCACTCCG
CTGCACGGAGATGGTCATCTCCGTGCGAAGCTGAACCTCCCGTTCGACCTTACCGGTGCCCAGAAGCGCTCCATCGCCGA
GATCGAGGGCGACGTGGCGCAAGGCGCGCCCATGTTGCGCCTTCTCCAGGGCGACGTGGGGTCGGGCAAGACCGCCGTGG
CGCTCAACGCCATGCTGATCGCGGTGGAATCGGGCGCGCAGGCGGCCCTGCTTGCACCAACCGAGATCCTGGCGCGCCAA
CACGCCGATACGCTGTCGAAGATGGCAGTGGGCACGGGGGTCAACATCGCTCTGCTGACCGGGCGGGACAAGGGCAGGGC
GCGCGAGTCCATTCTCATGGGCCTGCTCGACGGTAGCATCGACATCTGCGTGGGTACGCACGCGATCTTTCAGGAGGCAG
TTGCCTATCGCAATCTGGCGCTGGTGGTGATCGACGAACAGCATCGCTTCGGCGTGGGCCAGCGGCTGATGCTGACGCAG
AAGGCGCGGCGCACGCCCCATTGCCTTGCGATGACCGCCACGCCCATTCCGCGCACGCTGACGCTTGCGCAATATGGTGA
AATGGATGTCTCTCGCCTCGACGAGATGCCGCCCGGCCGACAGGCCATCGACACGAGAGTTGTCGCGCAGGAGCGGCTCG
CCGATGTGATAGAGGGGGTGGGCCGACACATCGCGAAGGGTGCCCAGGCGTACTGGGTCTGCCCCATGGTCCGCGAGCAG
GAGAACGACGATATGGCCGCAGCCGAGGCGCGCTTCGCAGCCTTGAAGGAGCGGTTCGGCGATATGGTCGTGATGGTGCA
CGGGCAGCTCCGGCCCGAGGTCAAGGATGCGGCGATGGAACGCTTCGCGCGCGGCGATGCGAAGCTGCTGGTGGCCACCA
CCGTAATCGAGGTTGGCGTCGACGTTCCGAATGCTACCTTGATGGTGATCGAGCAGGCGGAGCGTTTTGGCCTTGCCCAG
TTGCACCAGCTACGCGGCAGGGTCGGACGTGGCAGTCAGCAATCGACCTGTCTTCTTCTCCGGGGCGATGCGCTGTCCGA
GACCGGGCGCGAGAGGCTCGCCTTGATGAGGGAGACGCAGGACGGCTTTCGGCTTGCCGAAGAGGACTTGCGGCTGCGTG
GCGGCGGCGAACTTCTGGGGACGCGCCAGTCCGGCGAGACGCCGTTCAAGGTCGCGGATTTCGAACAGATCGCGAAGCTT
CTACCGCTGGCGCACGACGATGCCCGGCTCCTGATGGAGCGCGACGGCGGGCTTTCGTCCCCCCGCGGGCAGGCGGCGCG
CGTGTTGTTGTATCTGTTCGAACGCGACTGGGGCGTCCAGTTACTGCGCGGCGGTTAG

Upstream 100 bases:

>100_bases
TTTCCCTGAAGCCTCCCCTGAAAACTCCCCTGAAAACTCCATCGTGCATTAACCGGCTTCGCCATTGGCGAACCGGCCGG
CTTGCGCCTATGTCCGGACC

Downstream 100 bases:

>100_bases
CGCCGAAAGGGATGGGGCGACGCGAAAAAGGGGAAACGCGCCGCCCCCTCCCTGATGGGATTACTTGCTGGTCTTGGCGG
CGGGCGACGCGCTCTTCGTC

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MRPDLLNPLFAEASSLKGVGPGLARPLEKLGLTRVKDFAYHLPDRFVLRRAIANLDEASVGEQIVVALTPRDYRQSAGRG
PFRVMAEDESGSFVALTYFGRASYTAKKQLPLGEKRWVAGRLDQFGQTWQIVHPDHVSDDSAGMLGQLNEPVYPLSEGLT
QGRLQGLVHQSLAHLPQLPEWIEPGLAQRMDWPAWHEALPLAHKGEHKAARDRLAYDELLANSLALILVRESNRSRQGTP
LHGDGHLRAKLNLPFDLTGAQKRSIAEIEGDVAQGAPMLRLLQGDVGSGKTAVALNAMLIAVESGAQAALLAPTEILARQ
HADTLSKMAVGTGVNIALLTGRDKGRARESILMGLLDGSIDICVGTHAIFQEAVAYRNLALVVIDEQHRFGVGQRLMLTQ
KARRTPHCLAMTATPIPRTLTLAQYGEMDVSRLDEMPPGRQAIDTRVVAQERLADVIEGVGRHIAKGAQAYWVCPMVREQ
ENDDMAAAEARFAALKERFGDMVVMVHGQLRPEVKDAAMERFARGDAKLLVATTVIEVGVDVPNATLMVIEQAERFGLAQ
LHQLRGRVGRGSQQSTCLLLRGDALSETGRERLALMRETQDGFRLAEEDLRLRGGGELLGTRQSGETPFKVADFEQIAKL
LPLAHDDARLLMERDGGLSSPRGQAARVLLYLFERDWGVQLLRGG

Sequences:

>Translated_685_residues
MRPDLLNPLFAEASSLKGVGPGLARPLEKLGLTRVKDFAYHLPDRFVLRRAIANLDEASVGEQIVVALTPRDYRQSAGRG
PFRVMAEDESGSFVALTYFGRASYTAKKQLPLGEKRWVAGRLDQFGQTWQIVHPDHVSDDSAGMLGQLNEPVYPLSEGLT
QGRLQGLVHQSLAHLPQLPEWIEPGLAQRMDWPAWHEALPLAHKGEHKAARDRLAYDELLANSLALILVRESNRSRQGTP
LHGDGHLRAKLNLPFDLTGAQKRSIAEIEGDVAQGAPMLRLLQGDVGSGKTAVALNAMLIAVESGAQAALLAPTEILARQ
HADTLSKMAVGTGVNIALLTGRDKGRARESILMGLLDGSIDICVGTHAIFQEAVAYRNLALVVIDEQHRFGVGQRLMLTQ
KARRTPHCLAMTATPIPRTLTLAQYGEMDVSRLDEMPPGRQAIDTRVVAQERLADVIEGVGRHIAKGAQAYWVCPMVREQ
ENDDMAAAEARFAALKERFGDMVVMVHGQLRPEVKDAAMERFARGDAKLLVATTVIEVGVDVPNATLMVIEQAERFGLAQ
LHQLRGRVGRGSQQSTCLLLRGDALSETGRERLALMRETQDGFRLAEEDLRLRGGGELLGTRQSGETPFKVADFEQIAKL
LPLAHDDARLLMERDGGLSSPRGQAARVLLYLFERDWGVQLLRGG
>Mature_685_residues
MRPDLLNPLFAEASSLKGVGPGLARPLEKLGLTRVKDFAYHLPDRFVLRRAIANLDEASVGEQIVVALTPRDYRQSAGRG
PFRVMAEDESGSFVALTYFGRASYTAKKQLPLGEKRWVAGRLDQFGQTWQIVHPDHVSDDSAGMLGQLNEPVYPLSEGLT
QGRLQGLVHQSLAHLPQLPEWIEPGLAQRMDWPAWHEALPLAHKGEHKAARDRLAYDELLANSLALILVRESNRSRQGTP
LHGDGHLRAKLNLPFDLTGAQKRSIAEIEGDVAQGAPMLRLLQGDVGSGKTAVALNAMLIAVESGAQAALLAPTEILARQ
HADTLSKMAVGTGVNIALLTGRDKGRARESILMGLLDGSIDICVGTHAIFQEAVAYRNLALVVIDEQHRFGVGQRLMLTQ
KARRTPHCLAMTATPIPRTLTLAQYGEMDVSRLDEMPPGRQAIDTRVVAQERLADVIEGVGRHIAKGAQAYWVCPMVREQ
ENDDMAAAEARFAALKERFGDMVVMVHGQLRPEVKDAAMERFARGDAKLLVATTVIEVGVDVPNATLMVIEQAERFGLAQ
LHQLRGRVGRGSQQSTCLLLRGDALSETGRERLALMRETQDGFRLAEEDLRLRGGGELLGTRQSGETPFKVADFEQIAKL
LPLAHDDARLLMERDGGLSSPRGQAARVLLYLFERDWGVQLLRGG

Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup

COG id: COG1200

COG function: function code LK; RecG-like helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI2367254, Length=665, Percent_Identity=42.7067669172932, Blast_Score=443, Evalue=1e-125,
Organism=Escherichia coli, GI1787357, Length=384, Percent_Identity=37.7604166666667, Blast_Score=238, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR004609
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 75042; Mature: 75042

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPDLLNPLFAEASSLKGVGPGLARPLEKLGLTRVKDFAYHLPDRFVLRRAIANLDEASV
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
GEQIVVALTPRDYRQSAGRGPFRVMAEDESGSFVALTYFGRASYTAKKQLPLGEKRWVAG
CCEEEEEECCCHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHCCCCCCCHHHHH
RLDQFGQTWQIVHPDHVSDDSAGMLGQLNEPVYPLSEGLTQGRLQGLVHQSLAHLPQLPE
HHHHCCCEEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
WIEPGLAQRMDWPAWHEALPLAHKGEHKAARDRLAYDELLANSLALILVRESNRSRQGTP
HHCCHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
LHGDGHLRAKLNLPFDLTGAQKRSIAEIEGDVAQGAPMLRLLQGDVGSGKTAVALNAMLI
CCCCCEEEEEEECCEECCCCCHHHHHHHCCCHHCCCHHHHHHCCCCCCCCCEEEEEEEEE
AVESGAQAALLAPTEILARQHADTLSKMAVGTGVNIALLTGRDKGRARESILMGLLDGSI
EEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCE
DICVGTHAIFQEAVAYRNLALVVIDEQHRFGVGQRLMLTQKARRTPHCLAMTATPIPRTL
EEEECHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEE
TLAQYGEMDVSRLDEMPPGRQAIDTRVVAQERLADVIEGVGRHIAKGAQAYWVCPMVREQ
EHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCC
ENDDMAAAEARFAALKERFGDMVVMVHGQLRPEVKDAAMERFARGDAKLLVATTVIEVGV
CCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHCC
DVPNATLMVIEQAERFGLAQLHQLRGRVGRGSQQSTCLLLRGDALSETGRERLALMRETQ
CCCCCEEEEEEHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
DGFRLAEEDLRLRGGGELLGTRQSGETPFKVADFEQIAKLLPLAHDDARLLMERDGGLSS
HHHHHHHHHHEECCCCCEEECCCCCCCCCEECCHHHHHHHCCCCCCCHHHHHCCCCCCCC
PRGQAARVLLYLFERDWGVQLLRGG
CCCHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MRPDLLNPLFAEASSLKGVGPGLARPLEKLGLTRVKDFAYHLPDRFVLRRAIANLDEASV
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
GEQIVVALTPRDYRQSAGRGPFRVMAEDESGSFVALTYFGRASYTAKKQLPLGEKRWVAG
CCEEEEEECCCHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHCCCCCCCHHHHH
RLDQFGQTWQIVHPDHVSDDSAGMLGQLNEPVYPLSEGLTQGRLQGLVHQSLAHLPQLPE
HHHHCCCEEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
WIEPGLAQRMDWPAWHEALPLAHKGEHKAARDRLAYDELLANSLALILVRESNRSRQGTP
HHCCHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
LHGDGHLRAKLNLPFDLTGAQKRSIAEIEGDVAQGAPMLRLLQGDVGSGKTAVALNAMLI
CCCCCEEEEEEECCEECCCCCHHHHHHHCCCHHCCCHHHHHHCCCCCCCCCEEEEEEEEE
AVESGAQAALLAPTEILARQHADTLSKMAVGTGVNIALLTGRDKGRARESILMGLLDGSI
EEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCE
DICVGTHAIFQEAVAYRNLALVVIDEQHRFGVGQRLMLTQKARRTPHCLAMTATPIPRTL
EEEECHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEE
TLAQYGEMDVSRLDEMPPGRQAIDTRVVAQERLADVIEGVGRHIAKGAQAYWVCPMVREQ
EHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCC
ENDDMAAAEARFAALKERFGDMVVMVHGQLRPEVKDAAMERFARGDAKLLVATTVIEVGV
CCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHCC
DVPNATLMVIEQAERFGLAQLHQLRGRVGRGSQQSTCLLLRGDALSETGRERLALMRETQ
CCCCCEEEEEEHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
DGFRLAEEDLRLRGGGELLGTRQSGETPFKVADFEQIAKLLPLAHDDARLLMERDGGLSS
HHHHHHHHHHEECCCCCEEECCCCCCCCCEECCHHHHHHHCCCCCCCHHHHHCCCCCCCC
PRGQAARVLLYLFERDWGVQLLRGG
CCCHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]