| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199983
Identifier: 87199983
GI number: 87199983
Start: 2084247
End: 2084717
Strand: Reverse
Name: 87199983
Synonym: Saro_1966
Alternate gene names: NA
Gene position: 2084717-2084247 (Counterclockwise)
Preceding gene: 87199984
Following gene: 87199982
Centisome position: 58.53
GC content: 65.39
Gene sequence:
>471_bases ATGAGCGGGCGTCTTGGTGGCATTGCACGGCACGACAGGCCGCGCGGGGCCGTCGAGACGCTCGATCATGTTTCGGTCTC TCGCGAACTCGGCGTTCGCGGTGACCTGCGCGGCGCGATCCGGCCCGGAAAGTCCGGGCGCAGGCAGGTTTCCCTGATCG AAGCCGAAAGTTGGCAGGCCGCGCTCGCCGCCTTGCAGCTTTCCGCCGATCAATGGCTGCCTTGGCACGTTCGCCGGGCC AATCTCCTGGTCGAGGGCATCCGCTTGCCGCGAGAGGCGGGCAAGGTCATTGCCATCGGCTCGACGCTGCGCATCGAGAC AACTTGCGAATGCGATCCGTGCAGCCGCATGGACGAAATTCTACCCGGCCTGAAACTCGCGCTGATGCTTGACTGGCGCG GCGGTGTGCTCGGCCGGGTCCTGACAGATGGCGAGATCGCCATCGGCGACGAAGTGAGGATCGAGGAATGA
Upstream 100 bases:
>100_bases GGTCCGCGTCCTGTCGTGGTACGACAACGAGTGGGGCTTCTCCAACCGCATGCTCGACACGGCGGGCGCAATGGCGAAGT TCCTCTGAGGAACGGTTGAC
Downstream 100 bases:
>100_bases GCTTCAAGACCCTTGACGACATCGGCGACCTGACCGGCAAGACCGTGCTGGTGCGCGAGGACCTCAACGTGCCGATGCAG GACGGCGCGGTCACCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: MOSC Domain Containing Protein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSGRLGGIARHDRPRGAVETLDHVSVSRELGVRGDLRGAIRPGKSGRRQVSLIEAESWQAALAALQLSADQWLPWHVRRA NLLVEGIRLPREAGKVIAIGSTLRIETTCECDPCSRMDEILPGLKLALMLDWRGGVLGRVLTDGEIAIGDEVRIEE
Sequences:
>Translated_156_residues MSGRLGGIARHDRPRGAVETLDHVSVSRELGVRGDLRGAIRPGKSGRRQVSLIEAESWQAALAALQLSADQWLPWHVRRA NLLVEGIRLPREAGKVIAIGSTLRIETTCECDPCSRMDEILPGLKLALMLDWRGGVLGRVLTDGEIAIGDEVRIEE >Mature_155_residues SGRLGGIARHDRPRGAVETLDHVSVSRELGVRGDLRGAIRPGKSGRRQVSLIEAESWQAALAALQLSADQWLPWHVRRAN LLVEGIRLPREAGKVIAIGSTLRIETTCECDPCSRMDEILPGLKLALMLDWRGGVLGRVLTDGEIAIGDEVRIEE
Specific function: Unknown
COG id: COG2258
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17063; Mature: 16932
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLGGIARHDRPRGAVETLDHVSVSRELGVRGDLRGAIRPGKSGRRQVSLIEAESWQA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHH ALAALQLSADQWLPWHVRRANLLVEGIRLPREAGKVIAIGSTLRIETTCECDPCSRMDEI HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEECCEEEEEEECCCCCHHHHHHH LPGLKLALMLDWRGGVLGRVLTDGEIAIGDEVRIEE CCCCEEEEEEECCCCEEEEEEECCCEEECCEEEECC >Mature Secondary Structure SGRLGGIARHDRPRGAVETLDHVSVSRELGVRGDLRGAIRPGKSGRRQVSLIEAESWQA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHH ALAALQLSADQWLPWHVRRANLLVEGIRLPREAGKVIAIGSTLRIETTCECDPCSRMDEI HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEECCEEEEEEECCCCCHHHHHHH LPGLKLALMLDWRGGVLGRVLTDGEIAIGDEVRIEE CCCCEEEEEEECCCCEEEEEEECCCEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA