| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is apr [H]
Identifier: 87199854
GI number: 87199854
Start: 1935151
End: 1937463
Strand: Direct
Name: apr [H]
Synonym: Saro_1837
Alternate gene names: 87199854
Gene position: 1935151-1937463 (Clockwise)
Preceding gene: 87199844
Following gene: 87199856
Centisome position: 54.33
GC content: 70.0
Gene sequence:
>2313_bases ATGATTGCGTGGAAGTTCGCGGGGCAATCGGCCCTTTTGGTTCTGGCCTTGGCCCTGACAGGCTGCGGTGGAGGCGGCGG AGTAGCGAGCACGCCGACGCCGACGCCGACGCCCAGCCCGACCCCATCGCCGGCCCCCACGCCAACGCCGACGCCCACGC CCACGCCCACGCCTACGCCGGTTTCCTACAATACCGCCGAATATCGCAATTCGGACGGCCCCGTGTTCCACGGCGCGATT ACCGCGTGGGAAGCGGGGGCATCCGGCGCGGGGACGACGATTGCCATCGTGGACAGCGGGATCGATACCGCCAACAGCGA GTTCGCGGGCCGGATCTCGTCAGCATCGGCGGACGTCGCCGGATCGCGCGGCGTAAGGAACACCGGGGACGATCACGGAA CGCAGGTCGCGCTCGTCGCGGCGGCAGCGCGCAACGATTACGGAGTGATGGGCATCGCCTGGGGCGCCACAGTACAGATG CTGCGCGCGGATACACCCGGAACCTGCGCAAGTGCGGATGGGTGCACATTCTCCGACACGAACATCGCCGAAGGAATCGA CGCAGCGGTTGGAGCGGGCGCCCGGGTGGTCAATCTCTCGCTTGGTGGCGAAGCGGCGGATACAAACCTGCGCGCCGCCG TCGCCCGCGCCACGTCCGCCGGGCTGATCGTGGTGGTATCAGCCGGCAACGACGGGCAGAGCACCGATCCGGCCATTGAC CCGAACAACCCCGACCCCTTCGCGGTGTCGCTGCTCCAGGCAGGCGGTGGCAACGTGATCATCGTCGGATCGGTCAGCTC CGCCGGGCTGGTCTCGGACTTCAGCAACCGTGCAGGCTCGTCGGCATCCTCGTTCCTCATGGCCCAAGGCGAGACGATCT GCTGCGTGTACGAAGGCAGCCAGATCCGCGTGGTCGACGGTTTCCGCACGGCCGTGAATGGAACAAGCTTCGCCGCGCCC CAGGTCTCGGGCGCGGTCGCTCTTCTCGCCCAGGCGTTCCCGAACCTCACGGGCGCGCAAATCGTCAGCCTCCTGCTGAG TACGGCGCGCGAGGGCGGGGCAATCGGCACCGACCCTATCTACGGGCGCGGCATTCTCGATATCGCGCGAGCCTTTTCGC CGCAGGGTAGCACTGGCCTCGCCGGAACCAGCGTCGCCGTCTCGCTCGACAGCGTTGCGGGCACGACTTCGGGCGCGATG GGCGATGCGGTTTCGGGGGCCTCGCTCGGCACGGTCATGCTCGACGGCTACGGCAGGGCCTATGCTCTCGATCTCGGACG GGGGCTCCGTTTCGGTCAGGCGCGTCAGCCCTTGCTGGAGGCGCTGCGGGCCGGGGCGCGGCCAACCGGGTTCGAGGCCG GCGACGTGTCGCTCGCCTTCTCCGTGGACCGGCGGTTCGGGGCCGTGCCGTTGCGCCTTGCGCCGGGCGAGCGGGAGCAG GCTCGCGTGCTGGCATCGACGCTGGTGACGCGGATCGGGAACGCGCGCGAACTCGCGCTCGGATGGAACACATCCTCCGA TGCGCTGGCGGCACGTTTGCAGAAACGGCGCGAGGCGCAGTTCCTCGTCGCCGGTACGGCCAATGGCATGTTCGAGCGTC CCGAGCTTGGCTTCGCGGCACGGCAGAGGTTCGGCGGCATGGGCGTCACCGTCAGCGGCGGTCGCAGCCTTGTCTGGCGG CCCGAAGCATTGCGCGACCGTCGCGAGGACAGGCTGGCGCGCCTTGGCGTGGCGTTGGATGGCCACGGGGGCGATGCCCT CGACTGGCGGCTTGGCCTGGGCCTCATGCGCGAGGAGCGTACCGTGCTGGGCGCACGCTTCGCCGATGCGCTGGGCGGCG GCGGTGCCACGACCGGCACGATCGAGCCCGGCGTTACCTGGCGGCCGATGCGCGGATGGCACGTGGGCGCAACGGGCAGC CTGGGCTTCACCCGGGTCGCGGGAACCTCTGTGGCGCCCGGCGGGTCGAGGCTGGTGTCGTCGTCGTGGGCGTTCGACGT TGCGCGCGATGGCGCCCTGATCGAGGGCGACCGCCTTGGCCTGCGCCTGTCGCAGCCGTTGCGGGTGGAAAGCGGCGGGT TGGCGCTGAACCTTCCGGTCGCTTGGGACTATGCGACGCAGACTGCCCGTTTTGGCCGCGTCCCTTTATCCCTTGCGCCA AAGGGGCGCGAGCTTGACGCGGAAGTGGCGTGGTCGGCGCGGCTGTGGGACGGCGCCTTTTCCGCCAGCCTGTTCTGGCG GCGCGATCCGGGGCACTTCGCCGCCGCGCCCGACGATGCCGGCGGGGCGGTGCGCTGGACGGCGGGGTTCTAG
Upstream 100 bases:
>100_bases CGGTCCTGCTAAAGCTGTGTCATTCGGCATTTACCGTTTGGGGGTTATCAGCAAGAGACGGTGATGGCCACGGTGCGGTG GCTTTCGACAGGGAATCGCG
Downstream 100 bases:
>100_bases GTCGTAAACTCATGGAGGGCGCCATCGAGGTTTGAGGCAGAACGGCCTAGCTCTTTGGGGACAGGTGGCGAAGCCGCGCG CCTTCGCCGTCTTCCAACAC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MIAWKFAGQSALLVLALALTGCGGGGGVASTPTPTPTPSPTPSPAPTPTPTPTPTPTPTPVSYNTAEYRNSDGPVFHGAI TAWEAGASGAGTTIAIVDSGIDTANSEFAGRISSASADVAGSRGVRNTGDDHGTQVALVAAAARNDYGVMGIAWGATVQM LRADTPGTCASADGCTFSDTNIAEGIDAAVGAGARVVNLSLGGEAADTNLRAAVARATSAGLIVVVSAGNDGQSTDPAID PNNPDPFAVSLLQAGGGNVIIVGSVSSAGLVSDFSNRAGSSASSFLMAQGETICCVYEGSQIRVVDGFRTAVNGTSFAAP QVSGAVALLAQAFPNLTGAQIVSLLLSTAREGGAIGTDPIYGRGILDIARAFSPQGSTGLAGTSVAVSLDSVAGTTSGAM GDAVSGASLGTVMLDGYGRAYALDLGRGLRFGQARQPLLEALRAGARPTGFEAGDVSLAFSVDRRFGAVPLRLAPGEREQ ARVLASTLVTRIGNARELALGWNTSSDALAARLQKRREAQFLVAGTANGMFERPELGFAARQRFGGMGVTVSGGRSLVWR PEALRDRREDRLARLGVALDGHGGDALDWRLGLGLMREERTVLGARFADALGGGGATTGTIEPGVTWRPMRGWHVGATGS LGFTRVAGTSVAPGGSRLVSSSWAFDVARDGALIEGDRLGLRLSQPLRVESGGLALNLPVAWDYATQTARFGRVPLSLAP KGRELDAEVAWSARLWDGAFSASLFWRRDPGHFAAAPDDAGGAVRWTAGF
Sequences:
>Translated_770_residues MIAWKFAGQSALLVLALALTGCGGGGGVASTPTPTPTPSPTPSPAPTPTPTPTPTPTPTPVSYNTAEYRNSDGPVFHGAI TAWEAGASGAGTTIAIVDSGIDTANSEFAGRISSASADVAGSRGVRNTGDDHGTQVALVAAAARNDYGVMGIAWGATVQM LRADTPGTCASADGCTFSDTNIAEGIDAAVGAGARVVNLSLGGEAADTNLRAAVARATSAGLIVVVSAGNDGQSTDPAID PNNPDPFAVSLLQAGGGNVIIVGSVSSAGLVSDFSNRAGSSASSFLMAQGETICCVYEGSQIRVVDGFRTAVNGTSFAAP QVSGAVALLAQAFPNLTGAQIVSLLLSTAREGGAIGTDPIYGRGILDIARAFSPQGSTGLAGTSVAVSLDSVAGTTSGAM GDAVSGASLGTVMLDGYGRAYALDLGRGLRFGQARQPLLEALRAGARPTGFEAGDVSLAFSVDRRFGAVPLRLAPGEREQ ARVLASTLVTRIGNARELALGWNTSSDALAARLQKRREAQFLVAGTANGMFERPELGFAARQRFGGMGVTVSGGRSLVWR PEALRDRREDRLARLGVALDGHGGDALDWRLGLGLMREERTVLGARFADALGGGGATTGTIEPGVTWRPMRGWHVGATGS LGFTRVAGTSVAPGGSRLVSSSWAFDVARDGALIEGDRLGLRLSQPLRVESGGLALNLPVAWDYATQTARFGRVPLSLAP KGRELDAEVAWSARLWDGAFSASLFWRRDPGHFAAAPDDAGGAVRWTAGF >Mature_770_residues MIAWKFAGQSALLVLALALTGCGGGGGVASTPTPTPTPSPTPSPAPTPTPTPTPTPTPTPVSYNTAEYRNSDGPVFHGAI TAWEAGASGAGTTIAIVDSGIDTANSEFAGRISSASADVAGSRGVRNTGDDHGTQVALVAAAARNDYGVMGIAWGATVQM LRADTPGTCASADGCTFSDTNIAEGIDAAVGAGARVVNLSLGGEAADTNLRAAVARATSAGLIVVVSAGNDGQSTDPAID PNNPDPFAVSLLQAGGGNVIIVGSVSSAGLVSDFSNRAGSSASSFLMAQGETICCVYEGSQIRVVDGFRTAVNGTSFAAP QVSGAVALLAQAFPNLTGAQIVSLLLSTAREGGAIGTDPIYGRGILDIARAFSPQGSTGLAGTSVAVSLDSVAGTTSGAM GDAVSGASLGTVMLDGYGRAYALDLGRGLRFGQARQPLLEALRAGARPTGFEAGDVSLAFSVDRRFGAVPLRLAPGEREQ ARVLASTLVTRIGNARELALGWNTSSDALAARLQKRREAQFLVAGTANGMFERPELGFAARQRFGGMGVTVSGGRSLVWR PEALRDRREDRLARLGVALDGHGGDALDWRLGLGLMREERTVLGARFADALGGGGATTGTIEPGVTWRPMRGWHVGATGS LGFTRVAGTSVAPGGSRLVSSSWAFDVARDGALIEGDRLGLRLSQPLRVESGGLALNLPVAWDYATQTARFGRVPLSLAP KGRELDAEVAWSARLWDGAFSASLFWRRDPGHFAAAPDDAGGAVRWTAGF
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 78377; Mature: 78377
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAWKFAGQSALLVLALALTGCGGGGGVASTPTPTPTPSPTPSPAPTPTPTPTPTPTPTP CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSYNTAEYRNSDGPVFHGAITAWEAGASGAGTTIAIVDSGIDTANSEFAGRISSASADVA CCCCHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCC GSRGVRNTGDDHGTQVALVAAAARNDYGVMGIAWGATVQMLRADTPGTCASADGCTFSDT CCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC NIAEGIDAAVGAGARVVNLSLGGEAADTNLRAAVARATSAGLIVVVSAGNDGQSTDPAID CHHHCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC PNNPDPFAVSLLQAGGGNVIIVGSVSSAGLVSDFSNRAGSSASSFLMAQGETICCVYEGS CCCCCHHEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCHHEEEECCCEEEEEEECC QIRVVDGFRTAVNGTSFAAPQVSGAVALLAQAFPNLTGAQIVSLLLSTAREGGAIGTDPI EEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC YGRGILDIARAFSPQGSTGLAGTSVAVSLDSVAGTTSGAMGDAVSGASLGTVMLDGYGRA CCCHHHHHHHHCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEECCCCCE YALDLGRGLRFGQARQPLLEALRAGARPTGFEAGDVSLAFSVDRRFGAVPLRLAPGEREQ EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCHHH ARVLASTLVTRIGNARELALGWNTSSDALAARLQKRREAQFLVAGTANGMFERPELGFAA HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHH RQRFGGMGVTVSGGRSLVWRPEALRDRREDRLARLGVALDGHGGDALDWRLGLGLMREER HHHCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHCEEEECCCCCEEEHHHCCCHHHHHH TVLGARFADALGGGGATTGTIEPGVTWRPMRGWHVGATGSLGFTRVAGTSVAPGGSRLVS HHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEECCCCCCCCEEEECCCCCCCCCCCEEC SSWAFDVARDGALIEGDRLGLRLSQPLRVESGGLALNLPVAWDYATQTARFGRVPLSLAP CCCEEEECCCCCEEECCCCCEEECCCEEEECCCEEEECCEEECCHHHHHHHCCCCEEECC KGRELDAEVAWSARLWDGAFSASLFWRRDPGHFAAAPDDAGGAVRWTAGF CCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEECCCCCCCCEEEEECCC >Mature Secondary Structure MIAWKFAGQSALLVLALALTGCGGGGGVASTPTPTPTPSPTPSPAPTPTPTPTPTPTPTP CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSYNTAEYRNSDGPVFHGAITAWEAGASGAGTTIAIVDSGIDTANSEFAGRISSASADVA CCCCHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCC GSRGVRNTGDDHGTQVALVAAAARNDYGVMGIAWGATVQMLRADTPGTCASADGCTFSDT CCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC NIAEGIDAAVGAGARVVNLSLGGEAADTNLRAAVARATSAGLIVVVSAGNDGQSTDPAID CHHHCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC PNNPDPFAVSLLQAGGGNVIIVGSVSSAGLVSDFSNRAGSSASSFLMAQGETICCVYEGS CCCCCHHEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCHHEEEECCCEEEEEEECC QIRVVDGFRTAVNGTSFAAPQVSGAVALLAQAFPNLTGAQIVSLLLSTAREGGAIGTDPI EEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC YGRGILDIARAFSPQGSTGLAGTSVAVSLDSVAGTTSGAMGDAVSGASLGTVMLDGYGRA CCCHHHHHHHHCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEECCCCCE YALDLGRGLRFGQARQPLLEALRAGARPTGFEAGDVSLAFSVDRRFGAVPLRLAPGEREQ EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCHHH ARVLASTLVTRIGNARELALGWNTSSDALAARLQKRREAQFLVAGTANGMFERPELGFAA HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHH RQRFGGMGVTVSGGRSLVWRPEALRDRREDRLARLGVALDGHGGDALDWRLGLGLMREER HHHCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHCEEEECCCCCEEEHHHCCCHHHHHH TVLGARFADALGGGGATTGTIEPGVTWRPMRGWHVGATGSLGFTRVAGTSVAPGGSRLVS HHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEECCCCCCCCEEEECCCCCCCCCCCEEC SSWAFDVARDGALIEGDRLGLRLSQPLRVESGGLALNLPVAWDYATQTARFGRVPLSLAP CCCEEEECCCCCEEECCCCCEEECCCEEEECCCEEEECCEEECCHHHHHHHCCCCEEECC KGRELDAEVAWSARLWDGAFSASLFWRRDPGHFAAAPDDAGGAVRWTAGF CCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEECCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6420308; 9826175 [H]