| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is plsY
Identifier: 87199817
GI number: 87199817
Start: 1897735
End: 1898328
Strand: Direct
Name: plsY
Synonym: Saro_1800
Alternate gene names: 87199817
Gene position: 1897735-1898328 (Clockwise)
Preceding gene: 87199811
Following gene: 87199818
Centisome position: 53.28
GC content: 67.85
Gene sequence:
>594_bases ATGGAGTGCGGCGTGGAAACGCTCTTGCCTCTTGTCGTCGGCTATGTTCTGGGCTCGGTGCCCTTCGGCCTCATTCTCAC CCGCCTGACCGGCGCCGGCGACTTGCGCGCCATCGGTTCGGGCAACATCGGCGCGACCAACGTGCTGCGCACCGGCAAGA AGGGCCTTGCCGCGGCAACGCTGCTGCTCGACCTGGGGAAGGGGCTTGCCGCAGTGCTGATCGTCCGCCACGTGTGGCCC GGGGCAGAGGCACTGGCCGCGCTCGCAGCTGTGCTGGGCCACTGTTTCCCGGTCTGGCTGCGGTTCAAGGGCGGGAAGGG CGTGGCAACGCTCATGGGCGTGTCGCTTGCTCTCGCCTGGCCGATCGGCCTGGTCTATGCCGTCACATGGCTCGGCGTCC TGTTCTTGAGCCGCATCTCCTCGCTCGGGGGGATGAGTGCGGCGGTCGTCGCGCCCGTGGCGGCGGCGGTGCTCGGATAC GCACCCTACGTTCCGGTTCTCGCGCTGCTGGCTCTCCTCGTGCTGTATCTGCACCGGGAAAACATTGCCCGCCTTCGCGC CGGAACCGAACCGAAGGTCGGCAGCAGGAAGTGA
Upstream 100 bases:
>100_bases TTGGTTCGCAACTGTGCCCGTTCCCGTCATCGCCCGGCTTGTATCGGTAATGGGGGCAAAATGGAAACAGCCCTCTTTCG CTTTTCTCGTCGGATTGGGT
Downstream 100 bases:
>100_bases ACGCGGCTGCCGCAGCCACGCTGACCCGGGACGAGGCGTTTGCCCGTATCCGCCTGCTGCGGTCCCCCAATATTGGGCCG GTAAGCTACCACCAGCTCCT
Product: acyl-phosphate glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MECGVETLLPLVVGYVLGSVPFGLILTRLTGAGDLRAIGSGNIGATNVLRTGKKGLAAATLLLDLGKGLAAVLIVRHVWP GAEALAALAAVLGHCFPVWLRFKGGKGVATLMGVSLALAWPIGLVYAVTWLGVLFLSRISSLGGMSAAVVAPVAAAVLGY APYVPVLALLALLVLYLHRENIARLRAGTEPKVGSRK
Sequences:
>Translated_197_residues MECGVETLLPLVVGYVLGSVPFGLILTRLTGAGDLRAIGSGNIGATNVLRTGKKGLAAATLLLDLGKGLAAVLIVRHVWP GAEALAALAAVLGHCFPVWLRFKGGKGVATLMGVSLALAWPIGLVYAVTWLGVLFLSRISSLGGMSAAVVAPVAAAVLGY APYVPVLALLALLVLYLHRENIARLRAGTEPKVGSRK >Mature_197_residues MECGVETLLPLVVGYVLGSVPFGLILTRLTGAGDLRAIGSGNIGATNVLRTGKKGLAAATLLLDLGKGLAAVLIVRHVWP GAEALAALAAVLGHCFPVWLRFKGGKGVATLMGVSLALAWPIGLVYAVTWLGVLFLSRISSLGGMSAAVVAPVAAAVLGY APYVPVLALLALLVLYLHRENIARLRAGTEPKVGSRK
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=191, Percent_Identity=41.3612565445026, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_NOVAD (Q2G7D3)
Other databases:
- EMBL: CP000248 - RefSeq: YP_497074.1 - STRING: Q2G7D3 - GeneID: 3918359 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1800 - eggNOG: COG0344 - HOGENOM: HBG734487 - OMA: RKNIREM - ProtClustDB: CLSK2411663 - BioCyc: NARO279238:SARO_1800-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 20240; Mature: 20240
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15cbe794)-; HASH(0x15f9a928)-; HASH(0x164656c4)-; HASH(0x167bf584)-; HASH(0x14c58900)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECGVETLLPLVVGYVLGSVPFGLILTRLTGAGDLRAIGSGNIGATNVLRTGKKGLAAAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCHHHHHHH LLLDLGKGLAAVLIVRHVWPGAEALAALAAVLGHCFPVWLRFKGGKGVATLMGVSLALAW HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH PIGLVYAVTWLGVLFLSRISSLGGMSAAVVAPVAAAVLGYAPYVPVLALLALLVLYLHRE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NIARLRAGTEPKVGSRK HHHHHHCCCCCCCCCCH >Mature Secondary Structure MECGVETLLPLVVGYVLGSVPFGLILTRLTGAGDLRAIGSGNIGATNVLRTGKKGLAAAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCHHHHHHH LLLDLGKGLAAVLIVRHVWPGAEALAALAAVLGHCFPVWLRFKGGKGVATLMGVSLALAW HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH PIGLVYAVTWLGVLFLSRISSLGGMSAAVVAPVAAAVLGYAPYVPVLALLALLVLYLHRE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NIARLRAGTEPKVGSRK HHHHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA