| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is btuE [C]
Identifier: 87199786
GI number: 87199786
Start: 1863782
End: 1864270
Strand: Direct
Name: btuE [C]
Synonym: Saro_1769
Alternate gene names: 87199786
Gene position: 1863782-1864270 (Clockwise)
Preceding gene: 87199785
Following gene: 87199787
Centisome position: 52.33
GC content: 60.94
Gene sequence:
>489_bases ATGAGCGGGCCTCGCACCATTGCCGATTTCAAGGCGCGCAAGCCCAACGGCGAGGAAATCGACCTGGCCGAGAAGAAGGG CAAGGTCCTGCTCGTGGTGAACACCGCATCCAAGTGCGGGTTCACCCCGCAGTACGATGGCCTTGAGGCCCTTTGGCGCC AATATGGCGAGCGCGGATTTGAAGTTCTCGCCTTTCCCTGCAACCAGTTCGGCAAGCAGGAACCCGGCACGGCGGATGAG ATCGAAAGCTTCTGCAAGGTCAACTTCGGCCTCAGCTTTCCGCTCATGGCCAAGATCGAGGTCAATGGCGACAACGCCGA TCCGCTTTACGACTGGCTGAAGAGCGAGGCTCCGGGCGTGCTCGGCACCAAGTCGATCAAGTGGAACTTCACCAAGTTCC TGATCGACCGCGAAGGCCGCGTGGTCCGCCGCTATGCCCCCACGGACAAGCCGGAAAGCATCGCCGGGGACATCGAAAGG CTGCTCTGA
Upstream 100 bases:
>100_bases TGGATGCAACCCAGCGCGCCCGTCTGGTAATCGACGTTGCTGGCGGCAAGTCGCTGAACGTACCTGAAATACTGGCCCTC GCGGCGCAAGAGGGCCTGGC
Downstream 100 bases:
>100_bases CCGTCACCAAGGAGTCTGGTGAAAAAGCAGGCCGCGCCTCTCGCAAGAGCGCGGCCTTTTTCCTACCTTGTACACATGCC CCATGCCGCCTTCGTCCCGC
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSGPRTIADFKARKPNGEEIDLAEKKGKVLLVVNTASKCGFTPQYDGLEALWRQYGERGFEVLAFPCNQFGKQEPGTADE IESFCKVNFGLSFPLMAKIEVNGDNADPLYDWLKSEAPGVLGTKSIKWNFTKFLIDREGRVVRRYAPTDKPESIAGDIER LL
Sequences:
>Translated_162_residues MSGPRTIADFKARKPNGEEIDLAEKKGKVLLVVNTASKCGFTPQYDGLEALWRQYGERGFEVLAFPCNQFGKQEPGTADE IESFCKVNFGLSFPLMAKIEVNGDNADPLYDWLKSEAPGVLGTKSIKWNFTKFLIDREGRVVRRYAPTDKPESIAGDIER LL >Mature_161_residues SGPRTIADFKARKPNGEEIDLAEKKGKVLLVVNTASKCGFTPQYDGLEALWRQYGERGFEVLAFPCNQFGKQEPGTADEI ESFCKVNFGLSFPLMAKIEVNGDNADPLYDWLKSEAPGVLGTKSIKWNFTKFLIDREGRVVRRYAPTDKPESIAGDIERL L
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=157, Percent_Identity=45.2229299363057, Blast_Score=136, Evalue=9e-33, Organism=Homo sapiens, GI90903240, Length=157, Percent_Identity=45.2229299363057, Blast_Score=135, Evalue=1e-32, Organism=Homo sapiens, GI15618997, Length=155, Percent_Identity=43.2258064516129, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI192455698, Length=154, Percent_Identity=40.2597402597403, Blast_Score=120, Evalue=7e-28, Organism=Homo sapiens, GI90903238, Length=132, Percent_Identity=44.6969696969697, Blast_Score=111, Evalue=3e-25, Organism=Homo sapiens, GI4557629, Length=173, Percent_Identity=37.5722543352601, Blast_Score=97, Evalue=7e-21, Organism=Homo sapiens, GI33186887, Length=177, Percent_Identity=37.2881355932203, Blast_Score=93, Evalue=1e-19, Organism=Homo sapiens, GI41406084, Length=183, Percent_Identity=36.6120218579235, Blast_Score=92, Evalue=2e-19, Organism=Homo sapiens, GI6006001, Length=173, Percent_Identity=36.4161849710983, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI32967607, Length=182, Percent_Identity=32.967032967033, Blast_Score=85, Evalue=3e-17, Organism=Escherichia coli, GI1788003, Length=156, Percent_Identity=42.9487179487179, Blast_Score=139, Evalue=7e-35, Organism=Caenorhabditis elegans, GI17506887, Length=158, Percent_Identity=43.6708860759494, Blast_Score=143, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17535473, Length=158, Percent_Identity=44.9367088607595, Blast_Score=141, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71993584, Length=158, Percent_Identity=42.4050632911392, Blast_Score=127, Evalue=2e-30, Organism=Caenorhabditis elegans, GI193210707, Length=162, Percent_Identity=42.5925925925926, Blast_Score=125, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17550320, Length=181, Percent_Identity=34.2541436464088, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI193209493, Length=181, Percent_Identity=33.7016574585635, Blast_Score=107, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71993573, Length=95, Percent_Identity=38.9473684210526, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17507603, Length=107, Percent_Identity=36.4485981308411, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71999642, Length=77, Percent_Identity=37.6623376623377, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319721, Length=157, Percent_Identity=52.2292993630573, Blast_Score=191, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6322228, Length=146, Percent_Identity=54.7945205479452, Blast_Score=185, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6322826, Length=147, Percent_Identity=44.8979591836735, Blast_Score=145, Evalue=3e-36, Organism=Drosophila melanogaster, GI24656772, Length=163, Percent_Identity=50.3067484662577, Blast_Score=150, Evalue=4e-37, Organism=Drosophila melanogaster, GI24656767, Length=163, Percent_Identity=50.3067484662577, Blast_Score=150, Evalue=4e-37, Organism=Drosophila melanogaster, GI24656777, Length=163, Percent_Identity=50.3067484662577, Blast_Score=149, Evalue=7e-37, Organism=Drosophila melanogaster, GI85726443, Length=159, Percent_Identity=40.8805031446541, Blast_Score=114, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 18122; Mature: 17991
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPRTIADFKARKPNGEEIDLAEKKGKVLLVVNTASKCGFTPQYDGLEALWRQYGERGF CCCCCCCHHHHCCCCCCCEECCCCCCCCEEEEEECCHHCCCCCCCCCHHHHHHHHCCCCC EVLAFPCNQFGKQEPGTADEIESFCKVNFGLSFPLMAKIEVNGDNADPLYDWLKSEAPGV EEEEECCHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCC LGTKSIKWNFTKFLIDREGRVVRRYAPTDKPESIAGDIERLL EECCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCC >Mature Secondary Structure SGPRTIADFKARKPNGEEIDLAEKKGKVLLVVNTASKCGFTPQYDGLEALWRQYGERGF CCCCCCHHHHCCCCCCCEECCCCCCCCEEEEEECCHHCCCCCCCCCHHHHHHHHCCCCC EVLAFPCNQFGKQEPGTADEIESFCKVNFGLSFPLMAKIEVNGDNADPLYDWLKSEAPGV EEEEECCHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCC LGTKSIKWNFTKFLIDREGRVVRRYAPTDKPESIAGDIERLL EECCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]