Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199757

Identifier: 87199757

GI number: 87199757

Start: 1835243

End: 1835746

Strand: Direct

Name: 87199757

Synonym: Saro_1740

Alternate gene names: NA

Gene position: 1835243-1835746 (Clockwise)

Preceding gene: 87199756

Following gene: 87199761

Centisome position: 51.53

GC content: 68.45

Gene sequence:

>504_bases
ATGCTCGAAATTCTTGCCGCCATCGCCGCACAGTCCGGATCCGCGCTCAAGGCACGGCGCCAGACCATCGCCGTGGTCGA
TGGCTCGACCGGTGGCCTGATCTCGGCCAGCCTGCTCGCCATGCCCGGTGCTTCGGCGTTCTATCTGGGCGGCGGGGTAG
TCTACACGCTCAAGGGGCGGCGCATGGTGCTGGGCCACGAACCCGGCTCGCTGCGCGGCTTCACTTCGGCGACCGAGCCT
TACGCGCTGGCGCAGGCGCGCCTGATCCGCCAGCGCTATGGCGCGGACTGGGGCATTGCCGAAACCGGCGCTTCGGGGGG
CAGCGCCCACCCGCTCGGTGTCGCCTCGGGCACCAGCGCGATAGGCGTCGCAGGGCCTGAAGGGATCGAGGCGACGGTGC
AGGTTGTCACACAGAGCGATGACCGCCTTGCCAACATGCTGCAATTCACCAGGGCCGCGCTGGAACTCCTGCGCGATACG
CTGGCCACTCACTCCACCACGTAG

Upstream 100 bases:

>100_bases
CTCACCCGGCCCGGCCTGCAGCGGCTGTTCAACCGCGTGACCGGGGGCGTCTTTGCCGCTTTCGGGCTCGGCATGCTCGT
CGCACAGCGCTGAACCGGCC

Downstream 100 bases:

>100_bases
TTCGGCTTCCGCTTCTCCAGGAACGCCTGCATTCCCTCGCGGAAGTTGGGGCTGGCCGAAGTCATCAACTGGTTGCGGTT
CTCGATGGCCATCGCGGCCT

Product: competence/damage-inducible protein cinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLEILAAIAAQSGSALKARRQTIAVVDGSTGGLISASLLAMPGASAFYLGGGVVYTLKGRRMVLGHEPGSLRGFTSATEP
YALAQARLIRQRYGADWGIAETGASGGSAHPLGVASGTSAIGVAGPEGIEATVQVVTQSDDRLANMLQFTRAALELLRDT
LATHSTT

Sequences:

>Translated_167_residues
MLEILAAIAAQSGSALKARRQTIAVVDGSTGGLISASLLAMPGASAFYLGGGVVYTLKGRRMVLGHEPGSLRGFTSATEP
YALAQARLIRQRYGADWGIAETGASGGSAHPLGVASGTSAIGVAGPEGIEATVQVVTQSDDRLANMLQFTRAALELLRDT
LATHSTT
>Mature_167_residues
MLEILAAIAAQSGSALKARRQTIAVVDGSTGGLISASLLAMPGASAFYLGGGVVYTLKGRRMVLGHEPGSLRGFTSATEP
YALAQARLIRQRYGADWGIAETGASGGSAHPLGVASGTSAIGVAGPEGIEATVQVVTQSDDRLANMLQFTRAALELLRDT
LATHSTT

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 17041; Mature: 17041

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEILAAIAAQSGSALKARRQTIAVVDGSTGGLISASLLAMPGASAFYLGGGVVYTLKGR
CHHHHHHHHHCCCCHHHHCCEEEEEEECCCCCHHHHHHHHCCCCCEEEECCEEEEEECCC
RMVLGHEPGSLRGFTSATEPYALAQARLIRQRYGADWGIAETGASGGSAHPLGVASGTSA
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCE
IGVAGPEGIEATVQVVTQSDDRLANMLQFTRAALELLRDTLATHSTT
EECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLEILAAIAAQSGSALKARRQTIAVVDGSTGGLISASLLAMPGASAFYLGGGVVYTLKGR
CHHHHHHHHHCCCCHHHHCCEEEEEEECCCCCHHHHHHHHCCCCCEEEECCEEEEEECCC
RMVLGHEPGSLRGFTSATEPYALAQARLIRQRYGADWGIAETGASGGSAHPLGVASGTSA
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCE
IGVAGPEGIEATVQVVTQSDDRLANMLQFTRAALELLRDTLATHSTT
EECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA