| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is rimI [C]
Identifier: 87199754
GI number: 87199754
Start: 1831758
End: 1832441
Strand: Direct
Name: rimI [C]
Synonym: Saro_1737
Alternate gene names: 87199754
Gene position: 1831758-1832441 (Clockwise)
Preceding gene: 87199753
Following gene: 87199755
Centisome position: 51.43
GC content: 69.01
Gene sequence:
>684_bases ATGTCCGAAGACCACCCCCTCGACCGACCTGTCTGGAATTCTCTGGGCGGCCCGCAATCCGAACTCGATGTCGCCAGCGG AAACCTCAGGCGCCTCGATCCCGCCTATGGCCCTTTCGCGGCCGCTGCGCCCGGGGCCGAAGCCGGGCTTGCCTCGCTCC TGCAAGGCGATGCCGACGAAATCTGGCTGGTCGAACCCGAACCTGTCGCCCCGCCGCCCGGAACGCGTGTGATCCGCGTC GCGCCGCTTCTGCAGATGATCGCCGACGGGCCAGTTCCGTCATTCGATGATCCCGGCATCGTCGCCCTGGGCGAGACCGA CGTGCCCGAGATGACCGCGCTCGCCCTCGCGACCGAACCCGGCCCCTGGGCCAGCGGGACATGGCGCTACGGCCAGTTCT ACGGGGTACGCATCGACGGTCGCCTGGCCGCGATGGCCGGGGAACGGATGCGTCCCGCGCCGAACCTTGCCGAAGTCAGC GGAGTCTGCACCTGGCCCGAGTACCGGGGCAGGGGCCTTGCCGCTCGCCTGATCCGCAAGGTCATCGCCGGCATGGCTGC TCGCGGCGAGGTGCCCTACCTGCACAGTTACGCCAGCAACGCCTCGGCAATCCGCCTCTACGAATCCCTCGGCTTCCGCG CCCGCCGCGCGATGACGGCCACGCTTCTCGGGAAATCGACATGA
Upstream 100 bases:
>100_bases GGAAGAAATCGCCCGCATGCTCTCCGGTGCCGAAGTTACCGCCGAAGCCCGCGCCCAGGCAGACCGCCTGCTCGAACAGG CCTGACCGGCAATCACAGTA
Downstream 100 bases:
>100_bases CCACATCGGCCCTCACCGAAGCCGAAGCCGCCAACGAGCTGATGCGCCTGGCAAGGCAGATCGCGAAGCACAACCGCCTC TATCATGCAGAGGATTCGCC
Product: GCN5-like N-acetyltransferase
Products: CoA +ribosomal-protein N-acetyl-L-alanine [C]
Alternate protein names: GCN5-Related N-Acetyltransferase; FR47 Domain Protein; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; FR47 Domain-Containing Protein; GCN5-Like N-Acetyltransferase; Gnat Acetyltransferase; Acetyltransferase GNAT Family Protein; Acyltransferase; LOW QUALITY PROTEIN Acetyltransferase; FR47-Like Protein; Regulator Protein
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSEDHPLDRPVWNSLGGPQSELDVASGNLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPEPVAPPPGTRVIRV APLLQMIADGPVPSFDDPGIVALGETDVPEMTALALATEPGPWASGTWRYGQFYGVRIDGRLAAMAGERMRPAPNLAEVS GVCTWPEYRGRGLAARLIRKVIAGMAARGEVPYLHSYASNASAIRLYESLGFRARRAMTATLLGKST
Sequences:
>Translated_227_residues MSEDHPLDRPVWNSLGGPQSELDVASGNLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPEPVAPPPGTRVIRV APLLQMIADGPVPSFDDPGIVALGETDVPEMTALALATEPGPWASGTWRYGQFYGVRIDGRLAAMAGERMRPAPNLAEVS GVCTWPEYRGRGLAARLIRKVIAGMAARGEVPYLHSYASNASAIRLYESLGFRARRAMTATLLGKST >Mature_226_residues SEDHPLDRPVWNSLGGPQSELDVASGNLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPEPVAPPPGTRVIRVA PLLQMIADGPVPSFDDPGIVALGETDVPEMTALALATEPGPWASGTWRYGQFYGVRIDGRLAAMAGERMRPAPNLAEVSG VCTWPEYRGRGLAARLIRKVIAGMAARGEVPYLHSYASNASAIRLYESLGFRARRAMTATLLGKST
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S18. [C]
COG id: COG3393
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.128 [C]
Molecular weight: Translated: 24103; Mature: 23972
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDHPLDRPVWNSLGGPQSELDVASGNLRRLDPAYGPFAAAAPGAEAGLASLLQGDADE CCCCCCCCCHHHHHCCCCCCHHECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC IWLVEPEPVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGIVALGETDVPEMTALALATEP EEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEECCC GPWASGTWRYGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGRGLAARLIRK CCCCCCCEECCEEEEEEECCEEEECCCCCCCCCCCHHHHCCEECCHHHHCCCHHHHHHHH VIAGMAARGEVPYLHSYASNASAIRLYESLGFRARRAMTATLLGKST HHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCC >Mature Secondary Structure SEDHPLDRPVWNSLGGPQSELDVASGNLRRLDPAYGPFAAAAPGAEAGLASLLQGDADE CCCCCCCCHHHHHCCCCCCHHECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC IWLVEPEPVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGIVALGETDVPEMTALALATEP EEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEECCC GPWASGTWRYGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGRGLAARLIRK CCCCCCCEECCEEEEEEECCEEEECCCCCCCCCCCHHHHCCEECCHHHHCCCHHHHHHHH VIAGMAARGEVPYLHSYASNASAIRLYESLGFRARRAMTATLLGKST HHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; ribosomal-protein L-alanine [C]
Specific reaction: Acetyl-CoA + ribosomal-protein L-alanine = CoA +ribosomal-protein N-acetyl-L-alanine [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA