Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 87199753

GI number: 87199753

Start: 1830078

End: 1831742

Strand: Direct

Name: recN [H]

Synonym: Saro_1736

Alternate gene names: 87199753

Gene position: 1830078-1831742 (Clockwise)

Preceding gene: 87199749

Following gene: 87199754

Centisome position: 51.38

GC content: 70.81

Gene sequence:

>1665_bases
ATGCTGACCAGCCTGTCGATCCGCAATGTCGTGCTCATCGAAGCGCTCGACCTGTCGTTCGGCGGTGGGCTCGGCGTGCT
CACCGGCGAAACCGGCGCCGGCAAGTCGATCCTGCTCGACGCTCTCGGCCTCGTTCTGGGCGACCGCGCCGATAGCGGCC
TCGTTCGTGCCGGAGAGGACCAGGCCAGCGTCACCGCCACTTTCGAGTTCGACCGCCTGCCCGATGCCATCCGCCAGGCC
CTGGCCGAGGCAGAGATCGACGTCGAACCGGGCGAACCTCTGATCGTCAAGCGCCGCCTCAAGGCCGATGGCGGCTCCCG
CGCCTTCATCAACGACCAGCCCGTTGGCGTCGCCCTCCTGCGCGAACTGGCCCGCAGCCTGGTCGAACTCCACGGCCAGC
ACGACGATCGCGGCCTCGTCAACGCGCGCGGCCACCGGGCCCTGCTCGATCGCTATGCCGGGGCGGATGTCGCCGGTGTC
GAGGCGGCGTGGGGCAAGTGGCGCAAGGCCGAGGAAGCGCTGGCCGCCGCCCGCGCCCAGGTCGCCCGCGCGGCCGAGGA
ACAGGATCTACTCCTCGCCCATCTCGCCGAACTCACCGCGCTTGCTCCGGTCATCGGCGAGGAAGAGGAACTGGCCGGCC
AGCGCGCCGACATGCAGAAGGGCGAACGCCTCTCGGGCGATCTCGCCGAACTCCAGCGCCTGTGGGAAGGGTCCGACTCC
GCGCTGGCCATCCTGCGCAGCGCCGCGCGCCGGCTCGATCGCATCGCATCGGAACACCCGATGCTGGCAGAAGCCCTCGA
AGCGCTCGACCGCGCGGTGATCGAGGCGGGCGAGGCCGAGGACAAGCTCGCCAGCGCGGCCGAGGCACTGGCCCACGATC
CGGCGCTGCTCGACCGTATCGAAACCCGCCTGTTCGACCTGCGCGCCGTCGCCCGCAAACACGCCTGCGCGGTTGATGAT
CTGCCCCACCGGATGCACGAGATGCGCCTGGCGCTCGATGCCATCGAAGGCGGCGAGGCGCAGATCGCGGACCTCGAACG
CGCCGCCCGCGAAGCCGCGCTCGATTACCAGGCCAAGGCCGAGACGCTCTCGGTCCAGCGTGCCGAAGCCGCGCGCCGCC
TCGACAAGGCCGTGGCCGCCGAACTGGCCCCGCTCAGGCTCGACGCGGCGAGGTTCCACACCGCCGTCCTGCGTCTGCCG
GAAGACCGCTGGGGCGCGGGCGGCATGGACGCGGTCGAATTCCTGATATCGACCAACCCCGGCGCCGATTTCGCGCCGCT
CGGCAAGATCGCGTCGGGCGGCGAGCTTTCGCGCTTCATCCTCGCGCTCAAGGTCGCGCTGGCCGAAGAAGGCGGGGCCG
CGACGATCATCTTCGACGAGATCGACCGGGGCGTCGGGGGCGCGGTCGCCAGCGCCATCGGCGAACGCCTTGCGCGGCTC
GCCTCCGGTGGCCAGCTTCTCGCCGTCACCCACAGTCCCCAGGTCGCCGCGCGCGGTGACCGGCACTACATGATCGCCAA
GTCCTCCGAAGGCACCGTGACCCGCACGTCGGTCAGCCTGCTCGATGCGGCGGCGCGCAAGGAAGAAATCGCCCGCATGC
TCTCCGGTGCCGAAGTTACCGCCGAAGCCCGCGCCCAGGCAGACCGCCTGCTCGAACAGGCCTGA

Upstream 100 bases:

>100_bases
GCCGGATTCGCGTTGCGCTCTTGTGGCAGGGTGTCACCTGGATGAAACAGGTGGGGAACGCAGGTGACGCGGCGCGCGCA
AGGCGCTAGAGAATCGGGCG

Downstream 100 bases:

>100_bases
CCGGCAATCACAGTAATGTCCGAAGACCACCCCCTCGACCGACCTGTCTGGAATTCTCTGGGCGGCCCGCAATCCGAACT
CGATGTCGCCAGCGGAAACC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MLTSLSIRNVVLIEALDLSFGGGLGVLTGETGAGKSILLDALGLVLGDRADSGLVRAGEDQASVTATFEFDRLPDAIRQA
LAEAEIDVEPGEPLIVKRRLKADGGSRAFINDQPVGVALLRELARSLVELHGQHDDRGLVNARGHRALLDRYAGADVAGV
EAAWGKWRKAEEALAAARAQVARAAEEQDLLLAHLAELTALAPVIGEEEELAGQRADMQKGERLSGDLAELQRLWEGSDS
ALAILRSAARRLDRIASEHPMLAEALEALDRAVIEAGEAEDKLASAAEALAHDPALLDRIETRLFDLRAVARKHACAVDD
LPHRMHEMRLALDAIEGGEAQIADLERAAREAALDYQAKAETLSVQRAEAARRLDKAVAAELAPLRLDAARFHTAVLRLP
EDRWGAGGMDAVEFLISTNPGADFAPLGKIASGGELSRFILALKVALAEEGGAATIIFDEIDRGVGGAVASAIGERLARL
ASGGQLLAVTHSPQVAARGDRHYMIAKSSEGTVTRTSVSLLDAAARKEEIARMLSGAEVTAEARAQADRLLEQA

Sequences:

>Translated_554_residues
MLTSLSIRNVVLIEALDLSFGGGLGVLTGETGAGKSILLDALGLVLGDRADSGLVRAGEDQASVTATFEFDRLPDAIRQA
LAEAEIDVEPGEPLIVKRRLKADGGSRAFINDQPVGVALLRELARSLVELHGQHDDRGLVNARGHRALLDRYAGADVAGV
EAAWGKWRKAEEALAAARAQVARAAEEQDLLLAHLAELTALAPVIGEEEELAGQRADMQKGERLSGDLAELQRLWEGSDS
ALAILRSAARRLDRIASEHPMLAEALEALDRAVIEAGEAEDKLASAAEALAHDPALLDRIETRLFDLRAVARKHACAVDD
LPHRMHEMRLALDAIEGGEAQIADLERAAREAALDYQAKAETLSVQRAEAARRLDKAVAAELAPLRLDAARFHTAVLRLP
EDRWGAGGMDAVEFLISTNPGADFAPLGKIASGGELSRFILALKVALAEEGGAATIIFDEIDRGVGGAVASAIGERLARL
ASGGQLLAVTHSPQVAARGDRHYMIAKSSEGTVTRTSVSLLDAAARKEEIARMLSGAEVTAEARAQADRLLEQA
>Mature_554_residues
MLTSLSIRNVVLIEALDLSFGGGLGVLTGETGAGKSILLDALGLVLGDRADSGLVRAGEDQASVTATFEFDRLPDAIRQA
LAEAEIDVEPGEPLIVKRRLKADGGSRAFINDQPVGVALLRELARSLVELHGQHDDRGLVNARGHRALLDRYAGADVAGV
EAAWGKWRKAEEALAAARAQVARAAEEQDLLLAHLAELTALAPVIGEEEELAGQRADMQKGERLSGDLAELQRLWEGSDS
ALAILRSAARRLDRIASEHPMLAEALEALDRAVIEAGEAEDKLASAAEALAHDPALLDRIETRLFDLRAVARKHACAVDD
LPHRMHEMRLALDAIEGGEAQIADLERAAREAALDYQAKAETLSVQRAEAARRLDKAVAAELAPLRLDAARFHTAVLRLP
EDRWGAGGMDAVEFLISTNPGADFAPLGKIASGGELSRFILALKVALAEEGGAATIIFDEIDRGVGGAVASAIGERLARL
ASGGQLLAVTHSPQVAARGDRHYMIAKSSEGTVTRTSVSLLDAAARKEEIARMLSGAEVTAEARAQADRLLEQA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=558, Percent_Identity=33.6917562724014, Blast_Score=282, Evalue=5e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 58770; Mature: 58770

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSLSIRNVVLIEALDLSFGGGLGVLTGETGAGKSILLDALGLVLGDRADSGLVRAGED
CCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEECCCC
QASVTATFEFDRLPDAIRQALAEAEIDVEPGEPLIVKRRLKADGGSRAFINDQPVGVALL
CCEEEEEEEHHHCHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCEEEECCCCHHHHHH
RELARSLVELHGQHDDRGLVNARGHRALLDRYAGADVAGVEAAWGKWRKAEEALAAARAQ
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VARAAEEQDLLLAHLAELTALAPVIGEEEELAGQRADMQKGERLSGDLAELQRLWEGSDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCH
ALAILRSAARRLDRIASEHPMLAEALEALDRAVIEAGEAEDKLASAAEALAHDPALLDRI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH
ETRLFDLRAVARKHACAVDDLPHRMHEMRLALDAIEGGEAQIADLERAAREAALDYQAKA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ETLSVQRAEAARRLDKAVAAELAPLRLDAARFHTAVLRLPEDRWGAGGMDAVEFLISTNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
GADFAPLGKIASGGELSRFILALKVALAEEGGAATIIFDEIDRGVGGAVASAIGERLARL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHH
ASGGQLLAVTHSPQVAARGDRHYMIAKSSEGTVTRTSVSLLDAAARKEEIARMLSGAEVT
HCCCCEEEEECCCCEEECCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHH
AEARAQADRLLEQA
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLTSLSIRNVVLIEALDLSFGGGLGVLTGETGAGKSILLDALGLVLGDRADSGLVRAGED
CCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEECCCC
QASVTATFEFDRLPDAIRQALAEAEIDVEPGEPLIVKRRLKADGGSRAFINDQPVGVALL
CCEEEEEEEHHHCHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCEEEECCCCHHHHHH
RELARSLVELHGQHDDRGLVNARGHRALLDRYAGADVAGVEAAWGKWRKAEEALAAARAQ
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VARAAEEQDLLLAHLAELTALAPVIGEEEELAGQRADMQKGERLSGDLAELQRLWEGSDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCH
ALAILRSAARRLDRIASEHPMLAEALEALDRAVIEAGEAEDKLASAAEALAHDPALLDRI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH
ETRLFDLRAVARKHACAVDDLPHRMHEMRLALDAIEGGEAQIADLERAAREAALDYQAKA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ETLSVQRAEAARRLDKAVAAELAPLRLDAARFHTAVLRLPEDRWGAGGMDAVEFLISTNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
GADFAPLGKIASGGELSRFILALKVALAEEGGAATIIFDEIDRGVGGAVASAIGERLARL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHH
ASGGQLLAVTHSPQVAARGDRHYMIAKSSEGTVTRTSVSLLDAAARKEEIARMLSGAEVT
HCCCCEEEEECCCCEEECCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHH
AEARAQADRLLEQA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA