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The map label for this gene is 87199740

Identifier: 87199740

GI number: 87199740

Start: 1812029

End: 1812403

Strand: Direct

Name: 87199740

Synonym: Saro_1723

Alternate gene names: NA

Gene position: 1812029-1812403 (Clockwise)

Preceding gene: 87199739

Following gene: 87199741

Centisome position: 50.88

GC content: 65.6

Gene sequence:

>375_bases
ATGAACCGCCTTGCTCTTGCTGCAATCCTCGTGGCGAGCGGGATGGGTGTTGCCGTGGCGCAGCCTGCGGGCGATGCCGT
CCGCGGCAAGGCGGTGTTCGCGCGCTGCGCGGCCTGCCACGATCTGAATACCGGCGCGACCCGATTGGGCCCTTCGCTCA
AGGGCGTTGTTGGCCGCACGTCCGGCACCATGCCGAACTTCAACTATTCGCAGGCGATGAAGGACAAGGCGGTCGTGTGG
AACGCCACTACTCTCGATGCCTATCTGGCTGGCCCTGCGAAGTACATTCCGGGCAATCGCATGGCGTTCCCGCCGCTGAC
CAATCCGCAGGACCGCGCGGACCTCGTCGCCTTCCTCCAGCAATCCGCGCGCTGA

Upstream 100 bases:

>100_bases
CTGATGAAGCTCTACCTTCTCGCGCCTGCCAAGGACTGATATTCAGGCCCGCGAAAGCCGCGCCGTGCGAAGGCGGGGCA
TGAACCAGGGAAACCGCTTG

Downstream 100 bases:

>100_bases
CGCACTCGCGCCGCGAACTTCAAGGGCCCCGCTCCGAAAGGCGCGGGGCCTTTTGCCATGCATTGCACGCGGCGGCTTCC
CTCAAATAATCAATAACGAT

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNRLALAAILVASGMGVAVAQPAGDAVRGKAVFARCAACHDLNTGATRLGPSLKGVVGRTSGTMPNFNYSQAMKDKAVVW
NATTLDAYLAGPAKYIPGNRMAFPPLTNPQDRADLVAFLQQSAR

Sequences:

>Translated_124_residues
MNRLALAAILVASGMGVAVAQPAGDAVRGKAVFARCAACHDLNTGATRLGPSLKGVVGRTSGTMPNFNYSQAMKDKAVVW
NATTLDAYLAGPAKYIPGNRMAFPPLTNPQDRADLVAFLQQSAR
>Mature_124_residues
MNRLALAAILVASGMGVAVAQPAGDAVRGKAVFARCAACHDLNTGATRLGPSLKGVVGRTSGTMPNFNYSQAMKDKAVVW
NATTLDAYLAGPAKYIPGNRMAFPPLTNPQDRADLVAFLQQSAR

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=102, Percent_Identity=39.2156862745098, Blast_Score=97, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17539604, Length=105, Percent_Identity=49.5238095238095, Blast_Score=112, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17566554, Length=103, Percent_Identity=48.5436893203884, Blast_Score=109, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6320796, Length=103, Percent_Identity=37.8640776699029, Blast_Score=90, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6322508, Length=104, Percent_Identity=38.4615384615385, Blast_Score=89, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17137228, Length=112, Percent_Identity=43.75, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI17137204, Length=102, Percent_Identity=45.0980392156863, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12947; Mature: 12947

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLALAAILVASGMGVAVAQPAGDAVRGKAVFARCAACHDLNTGATRLGPSLKGVVGRT
CCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEECCC
SGTMPNFNYSQAMKDKAVVWNATTLDAYLAGPAKYIPGNRMAFPPLTNPQDRADLVAFLQ
CCCCCCCCHHHHHCCCEEEECCCHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH
QSAR
HHCC
>Mature Secondary Structure
MNRLALAAILVASGMGVAVAQPAGDAVRGKAVFARCAACHDLNTGATRLGPSLKGVVGRT
CCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEECCC
SGTMPNFNYSQAMKDKAVVWNATTLDAYLAGPAKYIPGNRMAFPPLTNPQDRADLVAFLQ
CCCCCCCCHHHHHCCCEEEECCCHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH
QSAR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]