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The map label for this gene is 87199711

Identifier: 87199711

GI number: 87199711

Start: 1778608

End: 1779465

Strand: Direct

Name: 87199711

Synonym: Saro_1694

Alternate gene names: NA

Gene position: 1778608-1779465 (Clockwise)

Preceding gene: 87199710

Following gene: 87199712

Centisome position: 49.94

GC content: 66.9

Gene sequence:

>858_bases
GTGGCCGCGCGCGCCTTCTGGCAAGGGCAGCTTCGCCTGGCGCTGGTCTCGATCCCGGTCGAGGTCTACCCCGCCACGCG
AAGTGGCGCTGCCATCAGCTTCCACCAGATCCACGAACCCAGCGGCAAGCGCATCCGCTATGAAAAGGTCGCGCCCGGCG
TGGGGCCGGTCGACCGCGAGGAGATCGTCAAGGGCTACGAGGTCTCGCGGGGAAACTACGTCCTGCTCGACGACGAGGAG
ATCGAATCCGTCCGCATCGAAAGCCGCAAGACGCTTGAACTCGTCCAGTTCGTCGATGCCGCCGAAGTCGACGTGCTCTA
CTACGAAAAGCCCTATTTCGTGGTCCCCGCCGACGATCTTGCCGAGGACGCCTACATCGTCCTGCGCGAAGCGTTGCGGA
CCACCGGCAAGGTCGGGCTCGGCCAGCTTTCGGTGCGCGGGCGCGAACAGCTCGTCTCGATCAAGCCCTGCGGACGCGGC
CTCGTCATGGAAGTGCTGCGCTATGCCGACGAGGTGCAGCGCGCGCAGAACTGGTTCCGCGACATTCCCGCGCGCGATGC
CGACCCCGAACTGCTCGATCTCGCCGCCAGCCTGATCGAGAAGAAGACCGCGAAGTTCGCGCCCGAACAATTCCACGACC
GCTACGTCGACGCGCTCCACGCGCTCATCGAGAAGAAGGTCAAGGCCAAGGGCAAGCGCATCGTCGAGGACCCGGAAGCC
GACGCGGCGCCCAGCGGCGGCAACGTCATCGACCTCATGGCTGCGCTCAAGAAGTCGCTGGGCGAGGGCAATGCCGGGGA
AGGCGAGGGCCGTCCTCGCCGCAAGGCCGCCGCGCCCCGCGCACGCAAGCGGGCGTGA

Upstream 100 bases:

>100_bases
GGAACCGTAGCGGGGCTTCGGCGATAGTCCCTGGTATGGCAGACCATCTTTCCCGCTCGCCGCGCCCCGCCGCGTTGCCC
CTTTCCGGGGGGCGCTGACC

Downstream 100 bases:

>100_bases
GCCATGGGGCGCAACGATCCGCTCGCCGCCTACAACGCCAAGCGCGACTTCGCGCGCACTGCGGAACCTGCCGGCAAGCG
CAAGTCCAGCGCCACGGGCA

Product: Ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MAARAFWQGQLRLALVSIPVEVYPATRSGAAISFHQIHEPSGKRIRYEKVAPGVGPVDREEIVKGYEVSRGNYVLLDDEE
IESVRIESRKTLELVQFVDAAEVDVLYYEKPYFVVPADDLAEDAYIVLREALRTTGKVGLGQLSVRGREQLVSIKPCGRG
LVMEVLRYADEVQRAQNWFRDIPARDADPELLDLAASLIEKKTAKFAPEQFHDRYVDALHALIEKKVKAKGKRIVEDPEA
DAAPSGGNVIDLMAALKKSLGEGNAGEGEGRPRRKAAAPRARKRA

Sequences:

>Translated_285_residues
MAARAFWQGQLRLALVSIPVEVYPATRSGAAISFHQIHEPSGKRIRYEKVAPGVGPVDREEIVKGYEVSRGNYVLLDDEE
IESVRIESRKTLELVQFVDAAEVDVLYYEKPYFVVPADDLAEDAYIVLREALRTTGKVGLGQLSVRGREQLVSIKPCGRG
LVMEVLRYADEVQRAQNWFRDIPARDADPELLDLAASLIEKKTAKFAPEQFHDRYVDALHALIEKKVKAKGKRIVEDPEA
DAAPSGGNVIDLMAALKKSLGEGNAGEGEGRPRRKAAAPRARKRA
>Mature_284_residues
AARAFWQGQLRLALVSIPVEVYPATRSGAAISFHQIHEPSGKRIRYEKVAPGVGPVDREEIVKGYEVSRGNYVLLDDEEI
ESVRIESRKTLELVQFVDAAEVDVLYYEKPYFVVPADDLAEDAYIVLREALRTTGKVGLGQLSVRGREQLVSIKPCGRGL
VMEVLRYADEVQRAQNWFRDIPARDADPELLDLAASLIEKKTAKFAPEQFHDRYVDALHALIEKKVKAKGKRIVEDPEAD
AAPSGGNVIDLMAALKKSLGEGNAGEGEGRPRRKAAAPRARKRA

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31615; Mature: 31484

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARAFWQGQLRLALVSIPVEVYPATRSGAAISFHQIHEPSGKRIRYEKVAPGVGPVDRE
CCCCCHHCCCEEEEEEECCEEEEECCCCCCEEEHHHHCCCCCCEEEEHHCCCCCCCCCHH
EIVKGYEVSRGNYVLLDDEEIESVRIESRKTLELVQFVDAAEVDVLYYEKPYFVVPADDL
HHHCCEEECCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCEEEECCHHH
AEDAYIVLREALRTTGKVGLGQLSVRGREQLVSIKPCGRGLVMEVLRYADEVQRAQNWFR
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DIPARDADPELLDLAASLIEKKTAKFAPEQFHDRYVDALHALIEKKVKAKGKRIVEDPEA
HCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DAAPSGGNVIDLMAALKKSLGEGNAGEGEGRPRRKAAAPRARKRA
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHCCC
>Mature Secondary Structure 
AARAFWQGQLRLALVSIPVEVYPATRSGAAISFHQIHEPSGKRIRYEKVAPGVGPVDRE
CCCCHHCCCEEEEEEECCEEEEECCCCCCEEEHHHHCCCCCCEEEEHHCCCCCCCCCHH
EIVKGYEVSRGNYVLLDDEEIESVRIESRKTLELVQFVDAAEVDVLYYEKPYFVVPADDL
HHHCCEEECCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCEEEECCHHH
AEDAYIVLREALRTTGKVGLGQLSVRGREQLVSIKPCGRGLVMEVLRYADEVQRAQNWFR
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DIPARDADPELLDLAASLIEKKTAKFAPEQFHDRYVDALHALIEKKVKAKGKRIVEDPEA
HCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DAAPSGGNVIDLMAALKKSLGEGNAGEGEGRPRRKAAAPRARKRA
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA