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The map label for this gene is cirA [C]

Identifier: 87199693

GI number: 87199693

Start: 1758826

End: 1761453

Strand: Direct

Name: cirA [C]

Synonym: Saro_1676

Alternate gene names: 87199693

Gene position: 1758826-1761453 (Clockwise)

Preceding gene: 87199692

Following gene: 87199696

Centisome position: 49.38

GC content: 62.94

Gene sequence:

>2628_bases
ATGCGCATGAAGTCCGGACCAAGTTATACCGCACGTATTTCACGCCTGCTGCTGCTTGCAGGCACGGCCATCAGCTTCCC
CGCGATGGCGCAGCAAGCGCAAAGCGATGCTGCGGAATCCGATCCCAACATCATCATCGTCACCGCGCAGAAGCGCAGCG
AAAATCTCCAGAACGTGCCGATCTCGATCCAGGCGCTCGGCACGCAGAAGCTCGAGCAGCTCGGCGTCGCGAACTTCACG
GATTACGCGCAGCAATTGCCGTCGGTGACCTTCCAGGCGCTGGGCGGAACGCCGGGTACCAACGTCGTCTACATGCGCGG
CGTGGCTTCGGGCGGCGACGGCAACCACTCTGGCTCGCTGCCTTCGGTCGGCGTCTATCTCGACGAGCAGCCGGTGACGA
CCATCGGCGGCAACCTCGATGTCCACGTCTACGACATCGCGCGCATCGAAAGCCTGTCCGGCCCGCAAGGCACCCTCTAC
GGTGCTTCCTCGGAAGCGGGCACGATCCGCATCATCACCAACAAGCCCGACACGACCGGCTTCTACGGCAGCGTCGATGC
CGAGGTGAACACGGTCAACAAGGGCGGCGAAGGCTACAAGTTCGAGGGCATGATCAACGCCCCGATCTCGGCCATGGCGG
CTCTTCGCGTCGTCGGTTATTACCAGCGCGACGCGGGCTTCATCGACAACGTGCCGGGCACGCGGACCTTCCTGGGCACG
CCCGTGCTCGACGAGAACGACCAGTACGCGGGCAATCTGCCCGACGGGATCAGCGTCAACAACAACGCCTTCGTGAAGAA
GGACTACAACTACACCGACACCTACGGCGGCCGCGCCGCGCTCAAGGTCGATCTCGACGACAACTGGACCGTGACCCCGC
AGGTCATGTACCAGAAGACCAAGAGCCGCGGTTCATACGGCTTCGATCCATCGGTCGGCGACCTTCAGGTCCAGCACTTC
TTCCCCGAGTTCCGCAACGACAAGTTCGTCCAGGCGGCGCTGACCATCGAGGGCAAGATCGGCAACTGGGACCTGACCTA
TTCGGGCGCCTATCTCGATCGCCGCACGTTCCAGTCGTCGGACTATACCGACTACGCCGAAGCCTATGACGCGCTCTATG
CGAACTACACCTACGAAGGCACGTTCTATTGCAGCGGGCTTGCCGGGTGTTTCGCCTACCAGGACGCCAACGGCAACACG
ATCGACCCGCGCCAGAAGGTGATCGGCACCGACCACTTCAAGAAGCTGAGCCAGGAACTGCGCATCGCATCGCCGGCGGA
CCAGCCGCTGCGGGTGGTTGCGGGCCTGTTCTACCAGCGCCAGTCGAACGACATTCACCAGGATTACCAGATCGCCAATC
TGGCACCAAACCTGTCCGTCAATGGCCATCCTGGTACGCTGTGGTTGACCGAGCAGAAGCGCGTCGACAAGGACTATGCC
GCGTTCGGTGAAGTGAGCTTCGACGTTGCGCCAACGGTCACGCTGACGGCCGGCGGTCGCTACTTCAAGTACGACAACTC
GCTGATCGGCTTCTTCGGCTTCGGCCGCAATCCGGGCGACACCGGCCAGTACGATGGCGACCCGCCGAACGCGGCCTATT
CAAACCGTACCGGCGTTGCCCAGTGCTTCACCACTGCGGGCGAGCGGCTGTATGACCGCAGCACCGACACCTACAGCTCG
TCGCGTACGCTGCTGCCGGCGGCGGTTCCGGGCGGGCCGTGCACCAACCTTGCGGTCTATCAGGACGGTACGCTCAAACC
GGTGCGCACCAAGGACGATGGCTTTACCTATCGCTTCAACGCGACCTGGAAGCCGAACAGCGACGTGATGCTCTATGCCA
CCTGGAGCCGCGGCTTCCGCCCCGGCGGCATCAACCGTCGCGCCGACGTCGAGCCCTACAAGGCGGACTTCCTCACCAAC
TACGAAGTCGGCTTCAAGTCGACGCTTGCGGGCGGAATGGTGCGCCTCAACGGTGCGGTGTACCAGCAGAACTGGAAGGA
CTTCCAGTTCGCGTTCCTTGGCGCCAACAGCTTTACCGAGATCCACAACGGCCCGAATGCCCGCATTCGCGGCGTCGACA
TGGACGCCTCGATCGGTCGCGGTCCGCTGACGGTCAACGTCTCGGCGGCTTACACCGATACCAAGACGCTCAAGAACCTC
TGCCTCTTCGACGATCCGTCGTTCACCTGTACCGCCGATGGTCCGACCGGGGAAACCAACCTCATCTCGGCACCCAAGGG
CACCCGCCTGCCGATCACGCCGAAGTTCAAGGCGAGCGGCACGCTGCGCTATACGGTTCCGATGGGCGATGCGAAGGCAC
ACTTCCAGCTCAACGGAATGTACCAGAGTTCGGCTTCGTCGGACATCCGCACGGCGATCTACGAAACCTTCAGTGGCGAC
GTGATCAACCCCTCGGCCCAGCTTGGCAGGCTCAAGGCGTTCGGCACCGTCAATGCGGCGGTCGGAGCGGACTGGGACAG
CTACTCGATCGAACTGTTCGTCTCGAACATCTTCGACGAGCGCGGCCAGCTTTCGCGCTTCCAGCAGTGCGGATCGTGCG
GCCAGCGTCCCTATATCGTGCCCACCACGCCGCGCATGTTCGGCCTGCGCGCGGGCGCGAAGTTCTGA

Upstream 100 bases:

>100_bases
CCCTCCTAACGTTCGTTTCAACTTGCAACCATCTTGACGATTGCGTGCGGCGCAGCGCAGCATTCGTTTGCAAAACAGAA
ACATGAGGGTGGGTTCTGCC

Downstream 100 bases:

>100_bases
TCGCGGGCTAGGAGAGCGCGGGGCGGGCCTGGGTCCGCCCCGGCTCGCCCATTCGCACCAGATCGGCAAGCGTCGCGGTC
ACTGGCGCGGTGAGCCCCGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug Domain Protein; NB Dependent Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Protein; Transporter OMR Family; NB Dependent Receptor Protein; Outer Membrane nB-Dependent Receptor; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor Family Protein

Number of amino acids: Translated: 875; Mature: 875

Protein sequence:

>875_residues
MRMKSGPSYTARISRLLLLAGTAISFPAMAQQAQSDAAESDPNIIIVTAQKRSENLQNVPISIQALGTQKLEQLGVANFT
DYAQQLPSVTFQALGGTPGTNVVYMRGVASGGDGNHSGSLPSVGVYLDEQPVTTIGGNLDVHVYDIARIESLSGPQGTLY
GASSEAGTIRIITNKPDTTGFYGSVDAEVNTVNKGGEGYKFEGMINAPISAMAALRVVGYYQRDAGFIDNVPGTRTFLGT
PVLDENDQYAGNLPDGISVNNNAFVKKDYNYTDTYGGRAALKVDLDDNWTVTPQVMYQKTKSRGSYGFDPSVGDLQVQHF
FPEFRNDKFVQAALTIEGKIGNWDLTYSGAYLDRRTFQSSDYTDYAEAYDALYANYTYEGTFYCSGLAGCFAYQDANGNT
IDPRQKVIGTDHFKKLSQELRIASPADQPLRVVAGLFYQRQSNDIHQDYQIANLAPNLSVNGHPGTLWLTEQKRVDKDYA
AFGEVSFDVAPTVTLTAGGRYFKYDNSLIGFFGFGRNPGDTGQYDGDPPNAAYSNRTGVAQCFTTAGERLYDRSTDTYSS
SRTLLPAAVPGGPCTNLAVYQDGTLKPVRTKDDGFTYRFNATWKPNSDVMLYATWSRGFRPGGINRRADVEPYKADFLTN
YEVGFKSTLAGGMVRLNGAVYQQNWKDFQFAFLGANSFTEIHNGPNARIRGVDMDASIGRGPLTVNVSAAYTDTKTLKNL
CLFDDPSFTCTADGPTGETNLISAPKGTRLPITPKFKASGTLRYTVPMGDAKAHFQLNGMYQSSASSDIRTAIYETFSGD
VINPSAQLGRLKAFGTVNAAVGADWDSYSIELFVSNIFDERGQLSRFQQCGSCGQRPYIVPTTPRMFGLRAGAKF

Sequences:

>Translated_875_residues
MRMKSGPSYTARISRLLLLAGTAISFPAMAQQAQSDAAESDPNIIIVTAQKRSENLQNVPISIQALGTQKLEQLGVANFT
DYAQQLPSVTFQALGGTPGTNVVYMRGVASGGDGNHSGSLPSVGVYLDEQPVTTIGGNLDVHVYDIARIESLSGPQGTLY
GASSEAGTIRIITNKPDTTGFYGSVDAEVNTVNKGGEGYKFEGMINAPISAMAALRVVGYYQRDAGFIDNVPGTRTFLGT
PVLDENDQYAGNLPDGISVNNNAFVKKDYNYTDTYGGRAALKVDLDDNWTVTPQVMYQKTKSRGSYGFDPSVGDLQVQHF
FPEFRNDKFVQAALTIEGKIGNWDLTYSGAYLDRRTFQSSDYTDYAEAYDALYANYTYEGTFYCSGLAGCFAYQDANGNT
IDPRQKVIGTDHFKKLSQELRIASPADQPLRVVAGLFYQRQSNDIHQDYQIANLAPNLSVNGHPGTLWLTEQKRVDKDYA
AFGEVSFDVAPTVTLTAGGRYFKYDNSLIGFFGFGRNPGDTGQYDGDPPNAAYSNRTGVAQCFTTAGERLYDRSTDTYSS
SRTLLPAAVPGGPCTNLAVYQDGTLKPVRTKDDGFTYRFNATWKPNSDVMLYATWSRGFRPGGINRRADVEPYKADFLTN
YEVGFKSTLAGGMVRLNGAVYQQNWKDFQFAFLGANSFTEIHNGPNARIRGVDMDASIGRGPLTVNVSAAYTDTKTLKNL
CLFDDPSFTCTADGPTGETNLISAPKGTRLPITPKFKASGTLRYTVPMGDAKAHFQLNGMYQSSASSDIRTAIYETFSGD
VINPSAQLGRLKAFGTVNAAVGADWDSYSIELFVSNIFDERGQLSRFQQCGSCGQRPYIVPTTPRMFGLRAGAKF
>Mature_875_residues
MRMKSGPSYTARISRLLLLAGTAISFPAMAQQAQSDAAESDPNIIIVTAQKRSENLQNVPISIQALGTQKLEQLGVANFT
DYAQQLPSVTFQALGGTPGTNVVYMRGVASGGDGNHSGSLPSVGVYLDEQPVTTIGGNLDVHVYDIARIESLSGPQGTLY
GASSEAGTIRIITNKPDTTGFYGSVDAEVNTVNKGGEGYKFEGMINAPISAMAALRVVGYYQRDAGFIDNVPGTRTFLGT
PVLDENDQYAGNLPDGISVNNNAFVKKDYNYTDTYGGRAALKVDLDDNWTVTPQVMYQKTKSRGSYGFDPSVGDLQVQHF
FPEFRNDKFVQAALTIEGKIGNWDLTYSGAYLDRRTFQSSDYTDYAEAYDALYANYTYEGTFYCSGLAGCFAYQDANGNT
IDPRQKVIGTDHFKKLSQELRIASPADQPLRVVAGLFYQRQSNDIHQDYQIANLAPNLSVNGHPGTLWLTEQKRVDKDYA
AFGEVSFDVAPTVTLTAGGRYFKYDNSLIGFFGFGRNPGDTGQYDGDPPNAAYSNRTGVAQCFTTAGERLYDRSTDTYSS
SRTLLPAAVPGGPCTNLAVYQDGTLKPVRTKDDGFTYRFNATWKPNSDVMLYATWSRGFRPGGINRRADVEPYKADFLTN
YEVGFKSTLAGGMVRLNGAVYQQNWKDFQFAFLGANSFTEIHNGPNARIRGVDMDASIGRGPLTVNVSAAYTDTKTLKNL
CLFDDPSFTCTADGPTGETNLISAPKGTRLPITPKFKASGTLRYTVPMGDAKAHFQLNGMYQSSASSDIRTAIYETFSGD
VINPSAQLGRLKAFGTVNAAVGADWDSYSIELFVSNIFDERGQLSRFQQCGSCGQRPYIVPTTPRMFGLRAGAKF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95271; Mature: 95271

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKSGPSYTARISRLLLLAGTAISFPAMAQQAQSDAAESDPNIIIVTAQKRSENLQNVP
CCCCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
ISIQALGTQKLEQLGVANFTDYAQQLPSVTFQALGGTPGTNVVYMRGVASGGDGNHSGSL
EEEEECCHHHHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCC
PSVGVYLDEQPVTTIGGNLDVHVYDIARIESLSGPQGTLYGASSEAGTIRIITNKPDTTG
CEEEEEECCCCCEEECCCEEEEEEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCC
FYGSVDAEVNTVNKGGEGYKFEGMINAPISAMAALRVVGYYQRDAGFIDNVPGTRTFLGT
CEEEECCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
PVLDENDQYAGNLPDGISVNNNAFVKKDYNYTDTYGGRAALKVDLDDNWTVTPQVMYQKT
CEECCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCEEEEEEECCCCCEECHHHHHHHH
KSRGSYGFDPSVGDLQVQHFFPEFRNDKFVQAALTIEGKIGNWDLTYSGAYLDRRTFQSS
HCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEHHHCCCC
DYTDYAEAYDALYANYTYEGTFYCSGLAGCFAYQDANGNTIDPRQKVIGTDHFKKLSQEL
CCCHHHHHHHHHHCCEEECCEEEECCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHH
RIASPADQPLRVVAGLFYQRQSNDIHQDYQIANLAPNLSVNGHPGTLWLTEQKRVDKDYA
CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCCEEEEECHHHCCCHHH
AFGEVSFDVAPTVTLTAGGRYFKYDNSLIGFFGFGRNPGDTGQYDGDPPNAAYSNRTGVA
HHCCEEECCCCEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
QCFTTAGERLYDRSTDTYSSSRTLLPAAVPGGPCTNLAVYQDGTLKPVRTKDDGFTYRFN
HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEECCCCEEEEEE
ATWKPNSDVMLYATWSRGFRPGGINRRADVEPYKADFLTNYEVGFKSTLAGGMVRLNGAV
EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHEEEECCCCCHHHHCCCEEEECCEE
YQQNWKDFQFAFLGANSFTEIHNGPNARIRGVDMDASIGRGPLTVNVSAAYTDTKTLKNL
EECCCCCEEEEEECCCCCHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCHHHHHHE
CLFDDPSFTCTADGPTGETNLISAPKGTRLPITPKFKASGTLRYTVPMGDAKAHFQLNGM
EEECCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECE
YQSSASSDIRTAIYETFSGDVINPSAQLGRLKAFGTVNAAVGADWDSYSIELFVSNIFDE
ECCCCCCHHHHHHHHHCCCCEECCCHHHCCEEEEEEEEHHHCCCCCCEEEEEEEEHHHHC
RGQLSRFQQCGSCGQRPYIVPTTPRMFGLRAGAKF
CHHHHHHHHHHCCCCCCEEEECCCHHEECCCCCCC
>Mature Secondary Structure
MRMKSGPSYTARISRLLLLAGTAISFPAMAQQAQSDAAESDPNIIIVTAQKRSENLQNVP
CCCCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
ISIQALGTQKLEQLGVANFTDYAQQLPSVTFQALGGTPGTNVVYMRGVASGGDGNHSGSL
EEEEECCHHHHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCC
PSVGVYLDEQPVTTIGGNLDVHVYDIARIESLSGPQGTLYGASSEAGTIRIITNKPDTTG
CEEEEEECCCCCEEECCCEEEEEEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCC
FYGSVDAEVNTVNKGGEGYKFEGMINAPISAMAALRVVGYYQRDAGFIDNVPGTRTFLGT
CEEEECCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
PVLDENDQYAGNLPDGISVNNNAFVKKDYNYTDTYGGRAALKVDLDDNWTVTPQVMYQKT
CEECCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCEEEEEEECCCCCEECHHHHHHHH
KSRGSYGFDPSVGDLQVQHFFPEFRNDKFVQAALTIEGKIGNWDLTYSGAYLDRRTFQSS
HCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEHHHCCCC
DYTDYAEAYDALYANYTYEGTFYCSGLAGCFAYQDANGNTIDPRQKVIGTDHFKKLSQEL
CCCHHHHHHHHHHCCEEECCEEEECCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHH
RIASPADQPLRVVAGLFYQRQSNDIHQDYQIANLAPNLSVNGHPGTLWLTEQKRVDKDYA
CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCCEEEEECHHHCCCHHH
AFGEVSFDVAPTVTLTAGGRYFKYDNSLIGFFGFGRNPGDTGQYDGDPPNAAYSNRTGVA
HHCCEEECCCCEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
QCFTTAGERLYDRSTDTYSSSRTLLPAAVPGGPCTNLAVYQDGTLKPVRTKDDGFTYRFN
HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEECCCCEEEEEE
ATWKPNSDVMLYATWSRGFRPGGINRRADVEPYKADFLTNYEVGFKSTLAGGMVRLNGAV
EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHEEEECCCCCHHHHCCCEEEECCEE
YQQNWKDFQFAFLGANSFTEIHNGPNARIRGVDMDASIGRGPLTVNVSAAYTDTKTLKNL
EECCCCCEEEEEECCCCCHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCHHHHHHE
CLFDDPSFTCTADGPTGETNLISAPKGTRLPITPKFKASGTLRYTVPMGDAKAHFQLNGM
EEECCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECE
YQSSASSDIRTAIYETFSGDVINPSAQLGRLKAFGTVNAAVGADWDSYSIELFVSNIFDE
ECCCCCCHHHHHHHHHCCCCEECCCHHHCCEEEEEEEEHHHCCCCCCEEEEEEEEHHHHC
RGQLSRFQQCGSCGQRPYIVPTTPRMFGLRAGAKF
CHHHHHHHHHHCCCCCCEEEECCCHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA