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The map label for this gene is ytfA [C]

Identifier: 87199604

GI number: 87199604

Start: 1645775

End: 1646542

Strand: Direct

Name: ytfA [C]

Synonym: Saro_1587

Alternate gene names: 87199604

Gene position: 1645775-1646542 (Clockwise)

Preceding gene: 87199597

Following gene: 87199605

Centisome position: 46.21

GC content: 64.45

Gene sequence:

>768_bases
ATGCCGCTAAGGTCGGCCGCGACGGGGGAAGCGCTTCGCGCGGAGCGTGGGGCCCCGTGTGATGTCGCGGAGATTGCCCC
CTTGTCCGAAACCGAAGCTTTCGACACCCAGCGTGCAGATATGGAAACTGCCTCGAAGCCCGCGCGCCGCAGTCGCGCGG
AAAGCCGCGAGCAGGCGATCAACCAGATCATCGACATCGCGACGAACGAATTTGTCGAGAAGGGGCTTGCCGGGGCCCGT
ATCGATGAAATCGCGGGCAAGGCGACCAAGCGCAAGATCTACTACTACTTCGAGGGCAAGGACGAGCTGTATCGCGCCGT
GCTGGAGCGGGCATACCGCCGGGTGCGCGAGAGTGAATCGCAAGTCGACGTCGAAAGCGGCAGCGCCGCCGACGCACTGC
GCCGCCTGATCGAGCATGACGTGCGCTACCACGCGCGCCACCCCGAGCTTGTGCGCCTGGTGATGAACGAGAACATCCAC
CGCGCCGAACACCTCAAGCAGATCGATACCCTGCCGCAGGGCAACCGGCGGGTCATCGAGATACTCGAGCGGATCATCGA
ACGCGGCGTCGCCGAAGGGCAGTTCCGGGCCGGGATCGACCCGGTGGACCTGCACCTCAACATGACCGCGCTCAGTTTCT
ACAACGTCTCCAACCAGTTCACCTTCGCTCACAACTTCGGGGTCGACATGACCAGCCCCGCAGCGATCGAGCGCCGGGCC
GGGCAGGTGGCGGACATCATCCTGGCCTGGGTGACGAAGAAGGACTGA

Upstream 100 bases:

>100_bases
GATGAATGTGAAGGCAAATGCCGATGCGGCAGCCGGCGATGCGGCAAAGGATCGGGGAAAACCCGGTTCGCGCCGCCTTG
CGGGCAGACCGCACGGCGAA

Downstream 100 bases:

>100_bases
CCGCGCGGCGGTGCGGGCAGGGCGCCGGATCGCCCTGCCGGCAACCACATGCGGATCGGCCACTCGTCCCCCGGACCAGT
CAAGGAGAGGACGAATGGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator TetR/ArcR Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Tetr Family; TetR-Family Transcriptional Regulator; TetR-Family Transcriptional Regulatory Protein; TRANSCRIPTIONal REGULATOR TetR Family; Transcription Regulator Protein Tetr-Like; Transcription Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPLRSAATGEALRAERGAPCDVAEIAPLSETEAFDTQRADMETASKPARRSRAESREQAINQIIDIATNEFVEKGLAGAR
IDEIAGKATKRKIYYYFEGKDELYRAVLERAYRRVRESESQVDVESGSAADALRRLIEHDVRYHARHPELVRLVMNENIH
RAEHLKQIDTLPQGNRRVIEILERIIERGVAEGQFRAGIDPVDLHLNMTALSFYNVSNQFTFAHNFGVDMTSPAAIERRA
GQVADIILAWVTKKD

Sequences:

>Translated_255_residues
MPLRSAATGEALRAERGAPCDVAEIAPLSETEAFDTQRADMETASKPARRSRAESREQAINQIIDIATNEFVEKGLAGAR
IDEIAGKATKRKIYYYFEGKDELYRAVLERAYRRVRESESQVDVESGSAADALRRLIEHDVRYHARHPELVRLVMNENIH
RAEHLKQIDTLPQGNRRVIEILERIIERGVAEGQFRAGIDPVDLHLNMTALSFYNVSNQFTFAHNFGVDMTSPAAIERRA
GQVADIILAWVTKKD
>Mature_254_residues
PLRSAATGEALRAERGAPCDVAEIAPLSETEAFDTQRADMETASKPARRSRAESREQAINQIIDIATNEFVEKGLAGARI
DEIAGKATKRKIYYYFEGKDELYRAVLERAYRRVRESESQVDVESGSAADALRRLIEHDVRYHARHPELVRLVMNENIHR
AEHLKQIDTLPQGNRRVIEILERIIERGVAEGQFRAGIDPVDLHLNMTALSFYNVSNQFTFAHNFGVDMTSPAAIERRAG
QVADIILAWVTKKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28786; Mature: 28655

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRSAATGEALRAERGAPCDVAEIAPLSETEAFDTQRADMETASKPARRSRAESREQAI
CCCCCCCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
NQIIDIATNEFVEKGLAGARIDEIAGKATKRKIYYYFEGKDELYRAVLERAYRRVRESES
HHHHHHHHHHHHHHCCCCCHHHHHHCHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
QVDVESGSAADALRRLIEHDVRYHARHPELVRLVMNENIHRAEHLKQIDTLPQGNRRVIE
HCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHH
ILERIIERGVAEGQFRAGIDPVDLHLNMTALSFYNVSNQFTFAHNFGVDMTSPAAIERRA
HHHHHHHCCCCCCHHHCCCCCEEEEEEEHHHEEECCCCEEEEEEECCCCCCCHHHHHHHH
GQVADIILAWVTKKD
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLRSAATGEALRAERGAPCDVAEIAPLSETEAFDTQRADMETASKPARRSRAESREQAI
CCCCCCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
NQIIDIATNEFVEKGLAGARIDEIAGKATKRKIYYYFEGKDELYRAVLERAYRRVRESES
HHHHHHHHHHHHHHCCCCCHHHHHHCHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
QVDVESGSAADALRRLIEHDVRYHARHPELVRLVMNENIHRAEHLKQIDTLPQGNRRVIE
HCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHH
ILERIIERGVAEGQFRAGIDPVDLHLNMTALSFYNVSNQFTFAHNFGVDMTSPAAIERRA
HHHHHHHCCCCCCHHHCCCCCEEEEEEEHHHEEECCCCEEEEEEECCCCCCCHHHHHHHH
GQVADIILAWVTKKD
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA