Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199582

Identifier: 87199582

GI number: 87199582

Start: 1623417

End: 1623935

Strand: Direct

Name: 87199582

Synonym: Saro_1565

Alternate gene names: NA

Gene position: 1623417-1623935 (Clockwise)

Preceding gene: 87199581

Following gene: 87199583

Centisome position: 45.58

GC content: 69.75

Gene sequence:

>519_bases
ATGCTGACCGTTCGCGCTCGGCCCGGCAGTCTGACCGATACCGCCGCACGTCTTGTCACTGCCGCAGGCATCCCGTCGGC
CTTGGTCGATGCCATGCCCCCACCGCGCGCCGCCGCACTGGCGGGGCTTGGCGACGCCGACTTTGAATCCGCCTTCGTCG
TTCCGCTAGCCGACCTGGCCCAGACTCTCGCTGACCTGCTCCCGCTCCACCGCCGCATCGTTCTCGTCGGCTCCATTGCG
GGCCTAGGCGACTGGGATGCGGTGCTTTCCGGAGCCTTCGCAGCGGGAGCGACCGGGCTGATGCGCTCGGTCGCGCTGGA
ATTCATGTCGCATGGCGTGACGATCAACCTCATCGCCGCGCCCTCGGACGATCCTTGCCACGCCCTCCAGGTCGCCGCGC
TTGCCAGCGCGCTGCTTGCATCGGATGGCGTCAGCGGGCAGGCCGTTCCCTGCGACGGCGGCGCGAACCTGCGCATGAGC
CGTGCCCGCCCCCGCGCTGCGCCTTTACGGGAGCCATGA

Upstream 100 bases:

>100_bases
CGATCGCCGGTGCCGTCGCTTACCTCGCCTCTGCGGCCGGGCGCGCGGTCAACGGGCAGGTCCTGCTGGTGGACGGTGGC
AAGTCGCTCGGCGTCGCGCC

Downstream 100 bases:

>100_bases
TCGCAGGCATGAAACCTGCCGCAGGCCAGCATCAATCGCCGAGGGAGAACCATGTCGCAACCCGCGGTCAAGTCCGCGCT
CCGTACGTTCGAAGTCCTCG

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLTVRARPGSLTDTAARLVTAAGIPSALVDAMPPPRAAALAGLGDADFESAFVVPLADLAQTLADLLPLHRRIVLVGSIA
GLGDWDAVLSGAFAAGATGLMRSVALEFMSHGVTINLIAAPSDDPCHALQVAALASALLASDGVSGQAVPCDGGANLRMS
RARPRAAPLREP

Sequences:

>Translated_172_residues
MLTVRARPGSLTDTAARLVTAAGIPSALVDAMPPPRAAALAGLGDADFESAFVVPLADLAQTLADLLPLHRRIVLVGSIA
GLGDWDAVLSGAFAAGATGLMRSVALEFMSHGVTINLIAAPSDDPCHALQVAALASALLASDGVSGQAVPCDGGANLRMS
RARPRAAPLREP
>Mature_172_residues
MLTVRARPGSLTDTAARLVTAAGIPSALVDAMPPPRAAALAGLGDADFESAFVVPLADLAQTLADLLPLHRRIVLVGSIA
GLGDWDAVLSGAFAAGATGLMRSVALEFMSHGVTINLIAAPSDDPCHALQVAALASALLASDGVSGQAVPCDGGANLRMS
RARPRAAPLREP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17322; Mature: 17322

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVRARPGSLTDTAARLVTAAGIPSALVDAMPPPRAAALAGLGDADFESAFVVPLADLA
CEEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEHHHHH
QTLADLLPLHRRIVLVGSIAGLGDWDAVLSGAFAAGATGLMRSVALEFMSHGVTINLIAA
HHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
PSDDPCHALQVAALASALLASDGVSGQAVPCDGGANLRMSRARPRAAPLREP
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLTVRARPGSLTDTAARLVTAAGIPSALVDAMPPPRAAALAGLGDADFESAFVVPLADLA
CEEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEHHHHH
QTLADLLPLHRRIVLVGSIAGLGDWDAVLSGAFAAGATGLMRSVALEFMSHGVTINLIAA
HHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
PSDDPCHALQVAALASALLASDGVSGQAVPCDGGANLRMSRARPRAAPLREP
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA