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The map label for this gene is gspE [C]

Identifier: 87199540

GI number: 87199540

Start: 1566401

End: 1567804

Strand: Direct

Name: gspE [C]

Synonym: Saro_1522

Alternate gene names: 87199540

Gene position: 1566401-1567804 (Clockwise)

Preceding gene: 87199539

Following gene: 87199541

Centisome position: 43.98

GC content: 59.33

Gene sequence:

>1404_bases
ATGAACTGGGAAATCCGCCGCAGGAACGTAAAGCCAAGATCGCCCATCGCGGTACCGGCCCTGCCTTTGCCCGGCGATAC
GATGTTGACCCCAGACAGGACGGACGAGGCTCAGGTCGGTGCCGCTCCCGCCGCAAATGACGTTCTGCTTGGCATCAAGG
TCGACATCCATCGAGAGCTTCTCGACCGCGTCAATCTGGCGGCCATCGAAAAGCTTTCGCGAACCGACCTGGTTCGTGAA
CTCTCTGACATCATCGGCGGCATCCTGACCGAACGGAATATCGCGCTCAATCGTGTCGAGCGCGAAGATCTCGTTGAAGA
CATCGTCGATGAACTGGTCGGCCTCGGTCCGCTTGAGCCACTCATCAAGGATGACAGCATATCGGACATTCTCGTCAACG
GTTACGAGACAGTTTTCGTCGAACGCGGCGGCAAACTGCAGCGAGTATCGACGCGGTTCCAGGATGAGCGGCACCTCCTG
CGCATAATCCAGAAGATTGTCAGTGCCGTAGGTCGCCGCGTCGACGAATCCTCGCCATTTGTCGATGCGAGACTGGCGGA
CGGTTCCCGCGTAAATGCGATCGTTGCGCCGCTTGCTATCGACGGATCACTGTTGTCGATCCGCAAGTTCTCCAAGAAGC
CGATCAGCATGGCCCGAATGATCGAGATTGGCAGCTTGTCAGAACCAATGGCGATTCTGCTCAAGGCCGTGGTTGAAGGT
CGTCTCAACATCATCATCTCTGGCGGCACCGGCTCGGGCAAGACGACGATGCTCAATGCCTTGTCTTCGTACATCGATGG
CACCGAACGTATCGTCACGATCGAGGACTCGGCCGAACTTCAACTCCAGCAGGAGCACGTTGCGCGTTTGGAGACGCGCC
CCCCCAACATCGAGGGGCGCGGTGAGGTCAGCCAACGCGATCTGGTCAAGAATGCCCTGCGCATGCGGCCTGACCGGATC
ATCCTGGGGGAATGCCGTGCGGGCGAAGCCTTCGATATGCTTCAGGCGATGAACACGGGGCATGACGGCTCGATGACGAC
GGTACATGCAAACACTCCGCGCGATGCGCTGACGCGTATTGAACAGATGGTTGGCATGAGCGGCATCGATATTGCGCCTC
GTTCGGTCCGGGCCCAGATCGGCTCGGCCGTCAACGTCGTGATCCAGATCGGCCGTCTTTCCGACGGTCGACGCAAGACT
CTCAGCATTTCCGAATTGACCGGGATGGAGGGGGAAACGATCACCATGCAGGAGATTTTCCGCTTCAACCAGCGTGGGCG
CGACGAGCTCGGCAACGTCATTGGCCATTTCGAAGCGACCGGCATCCGCCCCCGGTTCGCTGCACGCCTCGAGGCGAGTG
GCATCCACCTCGCCGCCGATCTATTCAAGCCGACGATGGGGTGA

Upstream 100 bases:

>100_bases
GCGTACTGATCCACAGCATCCAGAAGAAGACCTCTTTCAGCACAGCGCTGATGAAGCTTGCGCAGTCGATACACGTTCAG
TTGCATTCCGGACAGTTGCT

Downstream 100 bases:

>100_bases
TCGCATGACCCTCGAACTTCTCAGGTTCTTTGCCCTGTTGGCTATCTTCGTATTCGTCGTGATCGTCGTGCAGCAGGCCG
CCAATGCAACGCTCACGCGG

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MNWEIRRRNVKPRSPIAVPALPLPGDTMLTPDRTDEAQVGAAPAANDVLLGIKVDIHRELLDRVNLAAIEKLSRTDLVRE
LSDIIGGILTERNIALNRVEREDLVEDIVDELVGLGPLEPLIKDDSISDILVNGYETVFVERGGKLQRVSTRFQDERHLL
RIIQKIVSAVGRRVDESSPFVDARLADGSRVNAIVAPLAIDGSLLSIRKFSKKPISMARMIEIGSLSEPMAILLKAVVEG
RLNIIISGGTGSGKTTMLNALSSYIDGTERIVTIEDSAELQLQQEHVARLETRPPNIEGRGEVSQRDLVKNALRMRPDRI
ILGECRAGEAFDMLQAMNTGHDGSMTTVHANTPRDALTRIEQMVGMSGIDIAPRSVRAQIGSAVNVVIQIGRLSDGRRKT
LSISELTGMEGETITMQEIFRFNQRGRDELGNVIGHFEATGIRPRFAARLEASGIHLAADLFKPTMG

Sequences:

>Translated_467_residues
MNWEIRRRNVKPRSPIAVPALPLPGDTMLTPDRTDEAQVGAAPAANDVLLGIKVDIHRELLDRVNLAAIEKLSRTDLVRE
LSDIIGGILTERNIALNRVEREDLVEDIVDELVGLGPLEPLIKDDSISDILVNGYETVFVERGGKLQRVSTRFQDERHLL
RIIQKIVSAVGRRVDESSPFVDARLADGSRVNAIVAPLAIDGSLLSIRKFSKKPISMARMIEIGSLSEPMAILLKAVVEG
RLNIIISGGTGSGKTTMLNALSSYIDGTERIVTIEDSAELQLQQEHVARLETRPPNIEGRGEVSQRDLVKNALRMRPDRI
ILGECRAGEAFDMLQAMNTGHDGSMTTVHANTPRDALTRIEQMVGMSGIDIAPRSVRAQIGSAVNVVIQIGRLSDGRRKT
LSISELTGMEGETITMQEIFRFNQRGRDELGNVIGHFEATGIRPRFAARLEASGIHLAADLFKPTMG
>Mature_467_residues
MNWEIRRRNVKPRSPIAVPALPLPGDTMLTPDRTDEAQVGAAPAANDVLLGIKVDIHRELLDRVNLAAIEKLSRTDLVRE
LSDIIGGILTERNIALNRVEREDLVEDIVDELVGLGPLEPLIKDDSISDILVNGYETVFVERGGKLQRVSTRFQDERHLL
RIIQKIVSAVGRRVDESSPFVDARLADGSRVNAIVAPLAIDGSLLSIRKFSKKPISMARMIEIGSLSEPMAILLKAVVEG
RLNIIISGGTGSGKTTMLNALSSYIDGTERIVTIEDSAELQLQQEHVARLETRPPNIEGRGEVSQRDLVKNALRMRPDRI
ILGECRAGEAFDMLQAMNTGHDGSMTTVHANTPRDALTRIEQMVGMSGIDIAPRSVRAQIGSAVNVVIQIGRLSDGRRKT
LSISELTGMEGETITMQEIFRFNQRGRDELGNVIGHFEATGIRPRFAARLEASGIHLAADLFKPTMG

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 51223; Mature: 51223

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWEIRRRNVKPRSPIAVPALPLPGDTMLTPDRTDEAQVGAAPAANDVLLGIKVDIHREL
CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHH
LDRVNLAAIEKLSRTDLVRELSDIIGGILTERNIALNRVEREDLVEDIVDELVGLGPLEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
LIKDDSISDILVNGYETVFVERGGKLQRVSTRFQDERHLLRIIQKIVSAVGRRVDESSPF
HHCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VDARLADGSRVNAIVAPLAIDGSLLSIRKFSKKPISMARMIEIGSLSEPMAILLKAVVEG
EEEEECCCCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
RLNIIISGGTGSGKTTMLNALSSYIDGTERIVTIEDSAELQLQQEHVARLETRPPNIEGR
CEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
GEVSQRDLVKNALRMRPDRIILGECRAGEAFDMLQAMNTGHDGSMTTVHANTPRDALTRI
CCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH
EQMVGMSGIDIAPRSVRAQIGSAVNVVIQIGRLSDGRRKTLSISELTGMEGETITMQEIF
HHHHCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCEEEHHHHCCCCCCEEEHHHHH
RFNQRGRDELGNVIGHFEATGIRPRFAARLEASGIHLAADLFKPTMG
HHHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHCCCCC
>Mature Secondary Structure
MNWEIRRRNVKPRSPIAVPALPLPGDTMLTPDRTDEAQVGAAPAANDVLLGIKVDIHREL
CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHH
LDRVNLAAIEKLSRTDLVRELSDIIGGILTERNIALNRVEREDLVEDIVDELVGLGPLEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
LIKDDSISDILVNGYETVFVERGGKLQRVSTRFQDERHLLRIIQKIVSAVGRRVDESSPF
HHCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VDARLADGSRVNAIVAPLAIDGSLLSIRKFSKKPISMARMIEIGSLSEPMAILLKAVVEG
EEEEECCCCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
RLNIIISGGTGSGKTTMLNALSSYIDGTERIVTIEDSAELQLQQEHVARLETRPPNIEGR
CEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
GEVSQRDLVKNALRMRPDRIILGECRAGEAFDMLQAMNTGHDGSMTTVHANTPRDALTRI
CCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH
EQMVGMSGIDIAPRSVRAQIGSAVNVVIQIGRLSDGRRKTLSISELTGMEGETITMQEIF
HHHHCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCEEEHHHHCCCCCCEEEHHHHH
RFNQRGRDELGNVIGHFEATGIRPRFAARLEASGIHLAADLFKPTMG
HHHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]