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The map label for this gene is cirA [C]

Identifier: 87199508

GI number: 87199508

Start: 1530312

End: 1532891

Strand: Reverse

Name: cirA [C]

Synonym: Saro_1489

Alternate gene names: 87199508

Gene position: 1532891-1530312 (Counterclockwise)

Preceding gene: 87199509

Following gene: 87199507

Centisome position: 43.04

GC content: 57.64

Gene sequence:

>2580_bases
ATGAAACTGATTACATCCACAGCATTGGCCACGATCTTCGCCATGGCGGCACCCGCCCACGCGCAGGAACAGTCGGTCAC
CGAGGAAGATTCAGGCGGAATCGCGGAAATTGTCGTCACCGCGCAAAAGCGCGTGGAGAACGTACAGGACGTGCCCATCG
CCATTTCGGCCTTCACCGCCAACTCTCTGAAGGAACGCGCCGTCGGCGATGTATCCTCGCTGGCCAACATTTCGCCGAAC
GTCTCGCTGGATGCGGGCACGCCGTTTTCCGGCTCAACCTCGGTGCTGTCAGCCTATATCCGCGGCATCGGCCAGAATGA
TTTCGCCGCCAATCTCGATCCCGGCGTAGGCGTATACCTGGATGGCGTATATCTCGCTCGCACCGTTGGCGCGAACCTTG
ATCTGCCCGATGTGGAGCGGGTCGAAATCCTGAAAGGCCCGCAGGGCACGCTGTTTGGCCGCAATACCATCGGCGGTGCG
ATCTCGATCGTGACGCGCAATCCCGGCAAGGAACTGTCGTTCAACGGCGACATCACCACGGGCCGGTACAACCGCCTGGA
CGTCAAGGGTACGGCCAACATCCCCATTACCGAAACACTGGGCGCCAGCCTGACGTTTTCGAGCAAGGACCGGGACGGTT
TCCAGCAGCGGGTCGACTATCCCGGTGCTGGCCGCTTCGTGAACGACGTCGATCAGGCCTTCCGATCGAACTATTATCAG
GGCGCGAACAGCAACGGTGGTTCAAACGAATGGACGGTGCGCAGCAAATTACGCTGGGAAGCCAGCAGCCGCCTTCGCCT
GACGCTTTCCGGCGACTATTTGCGGCAAGATCAGGCCGCGACCGCCAATAATGTGCTCGCCGTAACCGCCAATGATCCCG
GCCCGTTTGCACCCACCGCTGACCGCGCTCTGGTCATTCCCGGGCTTGGAGCGACCGCCCTTTACGACGCTTCGTCCGGC
CTTGCCCCCAATGGCTTCAACTTTGCCGGCCTTTACAACTTCTGCATCGGCTCGACCGGAGCCGAGATCGCCGCGCGAAA
TGCCACAGCCCTGTGCGGCCCGCGCGGAACGCCTCTCAACCCTGGGCAGCAACTGGGCGGACTTGCCAGCGTCAACGTCG
ATGGCGACCCGAACAACGACCGCTTGCCGATCGACAATCGCTGGGTAACCACGGATCCTGACAAGACTTATGCCACCGGC
AACAGCTATTCCAAAATGAAGAACTGGGGCATCGGCGGGACGGTAGATTTCGATCTTTCCGACAGCATCTCGCTGAAGTC
GATCACCAGCTATCGCAAGATCGATTGGAGCAGCGGACTGGATGCGGACAATGCGCCTATCCGCATCCTGGAATTCGCAT
TCTCGCTGCGCCAGTGGCAATTCAGTCAGGAATTTCAACTGACGGGGCATGCCTTCGACAAAAAACTAAACTACGTTTTG
GGCGCCTATTATTTCAAGGAAAACAATGATCTGAACGACTTCGTGACGTTCAATCAGGGACTTTTGCAGATCGCCGGGCC
AAACAAGCTGAAGACCAAAAATTACGCGTTCTTCGGGCAGGTCGATTATCGCCTCAACGATCTGATCGGCATTACCGTGG
GCGGGCGCTACACGCACGAAGACAAGGGCATCAATGGTGGTCAGAGCGACCTGAACGGTTTCAACTATAAACTGTTCAAC
TGCCCGGTTTTCGGCGATCCTTGCTCGACTCCCCTTGGATTTACCAACCCGTCGCAACCGCTGCGCTATTATGTGACGCC
AACCCAGAACAAGTCGTTCAGCAACTTCTCGCCCAAGTTCGGGCTTCAGTTGCACCCAGCCGATGACCTCATGATCTATG
GGTCATTCGCCAAAGGCTACAAGACCGGCGGCTGGACCACGCGGCTTTCCAACCCGCTGCCTTATGCCCCCAGCTTCGAT
GAGGAAAAGGCAGAAAGCTTTGAAGTAGGCTTGAAATCGACGCTGCTTGACCGCCGCTTGCAGATCAATGCCGCTGCTTT
CACCACCAAGTTCGACGGCATCCAGTTGAACTTCCAGCAGGGCGTATCGCCGACAATCCAGAACGCTGGCACCGCGCGGA
TCAAGGGCTTTGAAGTTGAACTGACCGTAGCTCCGATCCGAAACTTCTCGGTCGCCACTTCGGTCGGATACACTGATGCC
TATTATACCTCCGTGCTGCCCCAGGCGATCGTCGCGCCCAATTCGCATCAGGCAGGTACGGCAATAGGCGTATCATTGCC
AAAAACCCCCAAGTGGAAATTTAACGTCAGCCCCCGCTATGAAGTATCTCTGGGCGCGGCGGGATCGCTGCTCCTGCTGG
CTGACTACACCCACACGTCATCGCAATGGAATGATACAGAACGCACCCTAACCTTGCTGCGCCCAGCGACCGACCTTCTG
AACGCCAGCGCAACCTACAAAGCCATGAATGGCGTGTGGGAACTGACAGCTGGCGGTACCAATATTACCAGCGAGCGCTT
TCTGACGTCTGGGGGGACCCAACAAAACGGCGCAGGGATCATCTTTGGAACGCCGAACCGTCCCGCCGAATGGTATCTTC
GCTTTGGCATGAAGTTTTAA

Upstream 100 bases:

>100_bases
CGGCCCGAACGGTCCGGTCCAAGTCTGCGCTGGCACAAGTCCACAAGCGCTTACGAGACGCACTTTACGCCTAAAATATA
AAACAGGGGGAGAAGAGAAA

Downstream 100 bases:

>100_bases
CGGGATCCTGTTTCACCAATTTCGGCACTTTCAACTTTTGGGCGGCAGAGCACTGCCGCCGCCCAACTTCCAGGGAAGTT
CCACTATGACCAATACACGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug Domain Protein; Outer Membrane Protein; NB Dependent Receptor; Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor; Transporter OMR Family; Outer Membrane Receptor Family Protein; NB-Dependent Receptor Protein; Outer Membrane Receptor For Iron Transport; Helix-Turn-Helix AraC Type; NB Dependent Receptor Protein; NB-Dependent Siderophore Receptor

Number of amino acids: Translated: 859; Mature: 859

Protein sequence:

>859_residues
MKLITSTALATIFAMAAPAHAQEQSVTEEDSGGIAEIVVTAQKRVENVQDVPIAISAFTANSLKERAVGDVSSLANISPN
VSLDAGTPFSGSTSVLSAYIRGIGQNDFAANLDPGVGVYLDGVYLARTVGANLDLPDVERVEILKGPQGTLFGRNTIGGA
ISIVTRNPGKELSFNGDITTGRYNRLDVKGTANIPITETLGASLTFSSKDRDGFQQRVDYPGAGRFVNDVDQAFRSNYYQ
GANSNGGSNEWTVRSKLRWEASSRLRLTLSGDYLRQDQAATANNVLAVTANDPGPFAPTADRALVIPGLGATALYDASSG
LAPNGFNFAGLYNFCIGSTGAEIAARNATALCGPRGTPLNPGQQLGGLASVNVDGDPNNDRLPIDNRWVTTDPDKTYATG
NSYSKMKNWGIGGTVDFDLSDSISLKSITSYRKIDWSSGLDADNAPIRILEFAFSLRQWQFSQEFQLTGHAFDKKLNYVL
GAYYFKENNDLNDFVTFNQGLLQIAGPNKLKTKNYAFFGQVDYRLNDLIGITVGGRYTHEDKGINGGQSDLNGFNYKLFN
CPVFGDPCSTPLGFTNPSQPLRYYVTPTQNKSFSNFSPKFGLQLHPADDLMIYGSFAKGYKTGGWTTRLSNPLPYAPSFD
EEKAESFEVGLKSTLLDRRLQINAAAFTTKFDGIQLNFQQGVSPTIQNAGTARIKGFEVELTVAPIRNFSVATSVGYTDA
YYTSVLPQAIVAPNSHQAGTAIGVSLPKTPKWKFNVSPRYEVSLGAAGSLLLLADYTHTSSQWNDTERTLTLLRPATDLL
NASATYKAMNGVWELTAGGTNITSERFLTSGGTQQNGAGIIFGTPNRPAEWYLRFGMKF

Sequences:

>Translated_859_residues
MKLITSTALATIFAMAAPAHAQEQSVTEEDSGGIAEIVVTAQKRVENVQDVPIAISAFTANSLKERAVGDVSSLANISPN
VSLDAGTPFSGSTSVLSAYIRGIGQNDFAANLDPGVGVYLDGVYLARTVGANLDLPDVERVEILKGPQGTLFGRNTIGGA
ISIVTRNPGKELSFNGDITTGRYNRLDVKGTANIPITETLGASLTFSSKDRDGFQQRVDYPGAGRFVNDVDQAFRSNYYQ
GANSNGGSNEWTVRSKLRWEASSRLRLTLSGDYLRQDQAATANNVLAVTANDPGPFAPTADRALVIPGLGATALYDASSG
LAPNGFNFAGLYNFCIGSTGAEIAARNATALCGPRGTPLNPGQQLGGLASVNVDGDPNNDRLPIDNRWVTTDPDKTYATG
NSYSKMKNWGIGGTVDFDLSDSISLKSITSYRKIDWSSGLDADNAPIRILEFAFSLRQWQFSQEFQLTGHAFDKKLNYVL
GAYYFKENNDLNDFVTFNQGLLQIAGPNKLKTKNYAFFGQVDYRLNDLIGITVGGRYTHEDKGINGGQSDLNGFNYKLFN
CPVFGDPCSTPLGFTNPSQPLRYYVTPTQNKSFSNFSPKFGLQLHPADDLMIYGSFAKGYKTGGWTTRLSNPLPYAPSFD
EEKAESFEVGLKSTLLDRRLQINAAAFTTKFDGIQLNFQQGVSPTIQNAGTARIKGFEVELTVAPIRNFSVATSVGYTDA
YYTSVLPQAIVAPNSHQAGTAIGVSLPKTPKWKFNVSPRYEVSLGAAGSLLLLADYTHTSSQWNDTERTLTLLRPATDLL
NASATYKAMNGVWELTAGGTNITSERFLTSGGTQQNGAGIIFGTPNRPAEWYLRFGMKF
>Mature_859_residues
MKLITSTALATIFAMAAPAHAQEQSVTEEDSGGIAEIVVTAQKRVENVQDVPIAISAFTANSLKERAVGDVSSLANISPN
VSLDAGTPFSGSTSVLSAYIRGIGQNDFAANLDPGVGVYLDGVYLARTVGANLDLPDVERVEILKGPQGTLFGRNTIGGA
ISIVTRNPGKELSFNGDITTGRYNRLDVKGTANIPITETLGASLTFSSKDRDGFQQRVDYPGAGRFVNDVDQAFRSNYYQ
GANSNGGSNEWTVRSKLRWEASSRLRLTLSGDYLRQDQAATANNVLAVTANDPGPFAPTADRALVIPGLGATALYDASSG
LAPNGFNFAGLYNFCIGSTGAEIAARNATALCGPRGTPLNPGQQLGGLASVNVDGDPNNDRLPIDNRWVTTDPDKTYATG
NSYSKMKNWGIGGTVDFDLSDSISLKSITSYRKIDWSSGLDADNAPIRILEFAFSLRQWQFSQEFQLTGHAFDKKLNYVL
GAYYFKENNDLNDFVTFNQGLLQIAGPNKLKTKNYAFFGQVDYRLNDLIGITVGGRYTHEDKGINGGQSDLNGFNYKLFN
CPVFGDPCSTPLGFTNPSQPLRYYVTPTQNKSFSNFSPKFGLQLHPADDLMIYGSFAKGYKTGGWTTRLSNPLPYAPSFD
EEKAESFEVGLKSTLLDRRLQINAAAFTTKFDGIQLNFQQGVSPTIQNAGTARIKGFEVELTVAPIRNFSVATSVGYTDA
YYTSVLPQAIVAPNSHQAGTAIGVSLPKTPKWKFNVSPRYEVSLGAAGSLLLLADYTHTSSQWNDTERTLTLLRPATDLL
NASATYKAMNGVWELTAGGTNITSERFLTSGGTQQNGAGIIFGTPNRPAEWYLRFGMKF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92697; Mature: 92697

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITSTALATIFAMAAPAHAQEQSVTEEDSGGIAEIVVTAQKRVENVQDVPIAISAFTA
CCEEHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCCEEEEEECH
NSLKERAVGDVSSLANISPNVSLDAGTPFSGSTSVLSAYIRGIGQNDFAANLDPGVGVYL
HHHHHHHHCCHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEE
DGVYLARTVGANLDLPDVERVEILKGPQGTLFGRNTIGGAISIVTRNPGKELSFNGDITT
CCEEEEHHHCCCCCCCCCCHHHEEECCCCCEEECCCCCCEEEEEECCCCCCEEECCCCCC
GRYNRLDVKGTANIPITETLGASLTFSSKDRDGFQQRVDYPGAGRFVNDVDQAFRSNYYQ
CCCEEEEECCCCCCCCHHCCCCEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
GANSNGGSNEWTVRSKLRWEASSRLRLTLSGDYLRQDQAATANNVLAVTANDPGPFAPTA
CCCCCCCCCCEEEEEEEEECCCCEEEEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCC
DRALVIPGLGATALYDASSGLAPNGFNFAGLYNFCIGSTGAEIAARNATALCGPRGTPLN
CCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCEEEECCCCCCCC
PGQQLGGLASVNVDGDPNNDRLPIDNRWVTTDPDKTYATGNSYSKMKNWGIGGTVDFDLS
CHHHHCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEECCCCHHHHHCCCCCCEEEECCC
DSISLKSITSYRKIDWSSGLDADNAPIRILEFAFSLRQWQFSQEFQLTGHAFDKKLNYVL
CCCCHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHCEEE
GAYYFKENNDLNDFVTFNQGLLQIAGPNKLKTKNYAFFGQVDYRLNDLIGITVGGRYTHE
EEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEECCEEECC
DKGINGGQSDLNGFNYKLFNCPVFGDPCSTPLGFTNPSQPLRYYVTPTQNKSFSNFSPKF
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
GLQLHPADDLMIYGSFAKGYKTGGWTTRLSNPLPYAPSFDEEKAESFEVGLKSTLLDRRL
CEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHE
QINAAAFTTKFDGIQLNFQQGVSPTIQNAGTARIKGFEVELTVAPIRNFSVATSVGYTDA
EEEEEEEEEECCCEEEEHHCCCCHHHHCCCCEEEEEEEEEEEEECCCCCEEEEECCCCHH
YYTSVLPQAIVAPNSHQAGTAIGVSLPKTPKWKFNVSPRYEVSLGAAGSLLLLADYTHTS
HHHHHCCHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECCCCCEEEEEECCCCC
SQWNDTERTLTLLRPATDLLNASATYKAMNGVWELTAGGTNITSERFLTSGGTQQNGAGI
CCCCCCHHEEEEECCHHHHHCCCHHHHHHCCEEEEECCCCCCCCCHHEECCCCCCCCCEE
IFGTPNRPAEWYLRFGMKF
EEECCCCCHHHHEEECCCC
>Mature Secondary Structure
MKLITSTALATIFAMAAPAHAQEQSVTEEDSGGIAEIVVTAQKRVENVQDVPIAISAFTA
CCEEHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCCEEEEEECH
NSLKERAVGDVSSLANISPNVSLDAGTPFSGSTSVLSAYIRGIGQNDFAANLDPGVGVYL
HHHHHHHHCCHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEE
DGVYLARTVGANLDLPDVERVEILKGPQGTLFGRNTIGGAISIVTRNPGKELSFNGDITT
CCEEEEHHHCCCCCCCCCCHHHEEECCCCCEEECCCCCCEEEEEECCCCCCEEECCCCCC
GRYNRLDVKGTANIPITETLGASLTFSSKDRDGFQQRVDYPGAGRFVNDVDQAFRSNYYQ
CCCEEEEECCCCCCCCHHCCCCEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
GANSNGGSNEWTVRSKLRWEASSRLRLTLSGDYLRQDQAATANNVLAVTANDPGPFAPTA
CCCCCCCCCCEEEEEEEEECCCCEEEEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCC
DRALVIPGLGATALYDASSGLAPNGFNFAGLYNFCIGSTGAEIAARNATALCGPRGTPLN
CCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCEEEECCCCCCCC
PGQQLGGLASVNVDGDPNNDRLPIDNRWVTTDPDKTYATGNSYSKMKNWGIGGTVDFDLS
CHHHHCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEECCCCHHHHHCCCCCCEEEECCC
DSISLKSITSYRKIDWSSGLDADNAPIRILEFAFSLRQWQFSQEFQLTGHAFDKKLNYVL
CCCCHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHCEEE
GAYYFKENNDLNDFVTFNQGLLQIAGPNKLKTKNYAFFGQVDYRLNDLIGITVGGRYTHE
EEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEECCEEECC
DKGINGGQSDLNGFNYKLFNCPVFGDPCSTPLGFTNPSQPLRYYVTPTQNKSFSNFSPKF
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
GLQLHPADDLMIYGSFAKGYKTGGWTTRLSNPLPYAPSFDEEKAESFEVGLKSTLLDRRL
CEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHE
QINAAAFTTKFDGIQLNFQQGVSPTIQNAGTARIKGFEVELTVAPIRNFSVATSVGYTDA
EEEEEEEEEECCCEEEEHHCCCCHHHHCCCCEEEEEEEEEEEEECCCCCEEEEECCCCHH
YYTSVLPQAIVAPNSHQAGTAIGVSLPKTPKWKFNVSPRYEVSLGAAGSLLLLADYTHTS
HHHHHCCHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECCCCCEEEEEECCCCC
SQWNDTERTLTLLRPATDLLNASATYKAMNGVWELTAGGTNITSERFLTSGGTQQNGAGI
CCCCCCHHEEEEECCHHHHHCCCHHHHHHCCEEEEECCCCCCCCCHHEECCCCCCCCCEE
IFGTPNRPAEWYLRFGMKF
EEECCCCCHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA