| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is camC [H]
Identifier: 87199498
GI number: 87199498
Start: 1519557
End: 1520810
Strand: Reverse
Name: camC [H]
Synonym: Saro_1478
Alternate gene names: 87199498
Gene position: 1520810-1519557 (Counterclockwise)
Preceding gene: 87199500
Following gene: 87199497
Centisome position: 42.7
GC content: 60.93
Gene sequence:
>1254_bases TTGGCTACCAACTTCGATGAGGCCGTCCGCGCCAAGGTCGAGCGCCCTGCCAACGTCCCGGAAGATCGGGTCTACGAAAT CGACATGTATGCGCTTAATGGGATTGAGGACGGATATCACGAAGCCTGGAAGAAGGTGCAGCATCCGGGCATTCCGGACC TGATCTGGACCCCGTTCACGGGCGGCCACTGGATCGCCACCAATGGCGACACCGTTAAGGAAGTCTACAGCGATCCGACC CGCTTCTCCAGCGAGGTGATCTTCCTTCCAAAGGAGGCCGGCGAGAAATACCAGATGGTCCCCACGAAGATGGACCCGCC CGAGCATACCCCCTATCGCAAGGCGCTCGACAAGGGGCTCAACCTCGCCAAAATCCGCAAGGTCGAGGACAAGGTGCGCG AGGTGGCGAGCAGCCTGATCGACAGTTTCGCCGCGCGTGGCGAATGCGACTTCGCGGCCGAATACGCAGAGCTTTTCCCG GTCCACGTTTTCATGGCGCTAGCCGACCTGCCGCTTGAGGACATCCCCGTTCTGAGCGAGTATGCTCGGCAGATGACCCG TCCCGAGGGCAACACGCCCGAAGAGATGGCGACCGACCTCGAAGCCGGCAACAACGGCTTCTACGCCTATGTCGACCCGA TCATCCGCGCCCGAGTGGGTGGCGACGGCGATGATCTTATTACGCTCATGGTCAACAGCGAGATCAACGGCGAGCGCATT GCGCACGACAAGGCACAAGGGCTCATCTCGCTGCTGCTGCTGGGCGGCCTCGATACCGTCGTCAACTTCCTCAGCTTCTT CATGATCCACCTTGCGCGCCATCCCGAACTGGTCGCTGAACTGCGCAGCGACCCGCTGAAGCTCATGCGCGGTGCCGAGG AGATGTTCCGCCGCTTCCCTGTCGTTTCCGAGGCCCGGATGGTTGCCAAGGACCAGGAATACAAGGGCGTGTTCCTCAAA CGTGGCGACATGATTTTACTGCCAACGGCGCTTCACGGCCTGGATGATGCTGCCAATCCCGAGCCTTGGAAGCTGGACTT TTCACGCCGGTCCATTTCGCACAGTACTTTCGGGGGCGGCCCGCACCGGTGTGCCGGAATGCACCTTGCCCGCATGGAGG TCATCGTCACGCTCGAGGAATGGCTCAAGCGTATTCCCGAGTTCAGCTTCAAGGAAGGCGAAACGCCTATCTACCATTCC GGCATCGTCGCCGCTGTCGAGAACGTGCCGCTGGTCTGGCCGATTGCGCGCTGA
Upstream 100 bases:
>100_bases ACCGACTTCTTCCTTGCTCCACCGCCAAAACACGTGTAACAAACACGCATAACGCGTGGGCACAACACGCATGGACACCT TTAACCCACAGGAGAGCAGA
Downstream 100 bases:
>100_bases CTGCATACCCCTTCACTCTAAGCAGGATCCCCCCTTGACTGCTATCCTTGTTACAACACGCGACGGCACGCGCACCGAAA TCCAAGCTGAGCCCGGACTC
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450-cam; Cytochrome P450cam [H]
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MATNFDEAVRAKVERPANVPEDRVYEIDMYALNGIEDGYHEAWKKVQHPGIPDLIWTPFTGGHWIATNGDTVKEVYSDPT RFSSEVIFLPKEAGEKYQMVPTKMDPPEHTPYRKALDKGLNLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFP VHVFMALADLPLEDIPVLSEYARQMTRPEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERI AHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAEEMFRRFPVVSEARMVAKDQEYKGVFLK RGDMILLPTALHGLDDAANPEPWKLDFSRRSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYHS GIVAAVENVPLVWPIAR
Sequences:
>Translated_417_residues MATNFDEAVRAKVERPANVPEDRVYEIDMYALNGIEDGYHEAWKKVQHPGIPDLIWTPFTGGHWIATNGDTVKEVYSDPT RFSSEVIFLPKEAGEKYQMVPTKMDPPEHTPYRKALDKGLNLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFP VHVFMALADLPLEDIPVLSEYARQMTRPEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERI AHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAEEMFRRFPVVSEARMVAKDQEYKGVFLK RGDMILLPTALHGLDDAANPEPWKLDFSRRSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYHS GIVAAVENVPLVWPIAR >Mature_416_residues ATNFDEAVRAKVERPANVPEDRVYEIDMYALNGIEDGYHEAWKKVQHPGIPDLIWTPFTGGHWIATNGDTVKEVYSDPTR FSSEVIFLPKEAGEKYQMVPTKMDPPEHTPYRKALDKGLNLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFPV HVFMALADLPLEDIPVLSEYARQMTRPEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERIA HDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAEEMFRRFPVVSEARMVAKDQEYKGVFLKR GDMILLPTALHGLDDAANPEPWKLDFSRRSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYHSG IVAAVENVPLVWPIAR
Specific function: Involved in a camphor oxidation system [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: =1.14.15.1 [H]
Molecular weight: Translated: 46833; Mature: 46702
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNFDEAVRAKVERPANVPEDRVYEIDMYALNGIEDGYHEAWKKVQHPGIPDLIWTPFT CCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCEECCCC GGHWIATNGDTVKEVYSDPTRFSSEVIFLPKEAGEKYQMVPTKMDPPEHTPYRKALDKGL CCEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHCCC NLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFPVHVFMALADLPLEDIPVLSE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YARQMTRPEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERI HHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEEEEEECCCCCCHHH AHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAEEMFRRFP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCC VVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRRSISHSTFGGG CHHHHHHHHCCCCCCEEEEECCCEEEECHHHHCCCCCCCCCCEEEECHHHHCCCCCCCCC PHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYHSGIVAAVENVPLVWPIAR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCC >Mature Secondary Structure ATNFDEAVRAKVERPANVPEDRVYEIDMYALNGIEDGYHEAWKKVQHPGIPDLIWTPFT CCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCEECCCC GGHWIATNGDTVKEVYSDPTRFSSEVIFLPKEAGEKYQMVPTKMDPPEHTPYRKALDKGL CCEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHCCC NLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFPVHVFMALADLPLEDIPVLSE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YARQMTRPEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERI HHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEEEEEECCCCCCHHH AHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAEEMFRRFP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCC VVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRRSISHSTFGGG CHHHHHHHHCCCCCCEEEEECCCEEEECHHHHCCCCCCCCCCEEEECHHHHCCCCCCCCC PHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYHSGIVAAVENVPLVWPIAR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3003058; 2613690; 7130171; 3813557; 2578028; 1610873; 12237225; 4066706; 9357977; 9649301; 10557259; 10698731; 11098139; 11258878; 11606730; 12464241; 9315686 [H]