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The map label for this gene is 87199476

Identifier: 87199476

GI number: 87199476

Start: 1499809

End: 1500054

Strand: Direct

Name: 87199476

Synonym: Saro_1456

Alternate gene names: NA

Gene position: 1499809-1500054 (Clockwise)

Preceding gene: 87199475

Following gene: 87199477

Centisome position: 42.11

GC content: 56.5

Gene sequence:

>246_bases
ATGAACAAGTCCGCCAGCCCGTTTCGCTACTTCAACTCGTCGCCGGAGATCATCCGGCTCGCGGTGTTGATGTACGTGCG
CTTCCCTTTGTCATTGCGGAACGTCGAGGACCTGCTGTTCGAGCGGGGGATCGACGTGTGTCACGAGACGGTGCGGTTGT
GGTGGAACAGGTTCGGGCCGCTGTTTGCAGCTGATTGTCAGTGGGCGTGTAATTCTCCGCAATATTGGGCTTTGAAAATT
CCCTGA

Upstream 100 bases:

>100_bases
AGGCGCGTACCGGTCTTTTCGCCGCAATCCGGCGAACAGGCGCAGGGGGCACTGTCAAAGCAAACTGGCTGGCGGGGCAG
GGCGGTGGTAGCTGGCCGGG

Downstream 100 bases:

>100_bases
TTGTTGGACCTGGTTGCCCAATGTGCCGGGGTTAACCCCGGCACATTGGGCAATGCCAAAATCGGCGCGATGACCTCCTG
GTGGGAGGCGCCGCCGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; ISHne6 Transposase

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MNKSASPFRYFNSSPEIIRLAVLMYVRFPLSLRNVEDLLFERGIDVCHETVRLWWNRFGPLFAADCQWACNSPQYWALKI
P

Sequences:

>Translated_81_residues
MNKSASPFRYFNSSPEIIRLAVLMYVRFPLSLRNVEDLLFERGIDVCHETVRLWWNRFGPLFAADCQWACNSPQYWALKI
P
>Mature_81_residues
MNKSASPFRYFNSSPEIIRLAVLMYVRFPLSLRNVEDLLFERGIDVCHETVRLWWNRFGPLFAADCQWACNSPQYWALKI
P

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9596; Mature: 9596

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSASPFRYFNSSPEIIRLAVLMYVRFPLSLRNVEDLLFERGIDVCHETVRLWWNRFGP
CCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
LFAADCQWACNSPQYWALKIP
EEECCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MNKSASPFRYFNSSPEIIRLAVLMYVRFPLSLRNVEDLLFERGIDVCHETVRLWWNRFGP
CCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
LFAADCQWACNSPQYWALKIP
EEECCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA