| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199471
Identifier: 87199471
GI number: 87199471
Start: 1496007
End: 1496474
Strand: Reverse
Name: 87199471
Synonym: Saro_1450
Alternate gene names: NA
Gene position: 1496474-1496007 (Counterclockwise)
Preceding gene: 87199472
Following gene: 87199470
Centisome position: 42.02
GC content: 68.8
Gene sequence:
>468_bases ATGGCAAGCACGGCAGTGGACCTCGCCGGCCGGCCGGCCGGTCCGAACGAAACGGGCAGGCCAGCCGACTGCGACCGCAG GGTCGAGGCACTGATGGATCTCGATCTCGAGGGTCTCAGGGCCGAGTGGAGGAGGCACTACGGTAGCCCCCCTGCCCTGC GTTCCGTGGCAATCCTACGGATGCTGCTCGCTTGGCGGATGCAGGCAAGTGCCGCAGGTGGTCTCGACAGTGATAGCCGC CGCCAAATCGCGCGCAAGGGCCGGGTAGCGGCCGAAGGGCTCGAACTCGGCATCGGGGGACGCCTGACCCGGACATGGCA GGGTCGCGAGGTCGAGGTGGTGGTGGAGGCCGAGGGCTTCCGCTGGAACGGCACGCTATACCCCAGCCTCTCGGCTGCCG CGAGCGCGATCGCAGGATCGCGCTGGAACGGGCCACGTTTCTTCGGCCTCAGGCAACGCCGCCCATGA
Upstream 100 bases:
>100_bases CCGTACGCGGCACCCTTGCCGGCGCGCTGAAGAAGCGTGGACTTACCATCACCTCGGACAAGCCCGACGGCGTCCGCCAC TACCGGGCGGAGAGCAGGTG
Downstream 100 bases:
>100_bases AGACGCTGGCCTGCGCGATCTACACCCGCAAGAGCTCGGATGAAGGGCTCGAACAGGGTTTCAACAGCCTCGATGCCCAG CGCGAGGCAGGCGAGGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MASTAVDLAGRPAGPNETGRPADCDRRVEALMDLDLEGLRAEWRRHYGSPPALRSVAILRMLLAWRMQASAAGGLDSDSR RQIARKGRVAAEGLELGIGGRLTRTWQGREVEVVVEAEGFRWNGTLYPSLSAAASAIAGSRWNGPRFFGLRQRRP
Sequences:
>Translated_155_residues MASTAVDLAGRPAGPNETGRPADCDRRVEALMDLDLEGLRAEWRRHYGSPPALRSVAILRMLLAWRMQASAAGGLDSDSR RQIARKGRVAAEGLELGIGGRLTRTWQGREVEVVVEAEGFRWNGTLYPSLSAAASAIAGSRWNGPRFFGLRQRRP >Mature_154_residues ASTAVDLAGRPAGPNETGRPADCDRRVEALMDLDLEGLRAEWRRHYGSPPALRSVAILRMLLAWRMQASAAGGLDSDSRR QIARKGRVAAEGLELGIGGRLTRTWQGREVEVVVEAEGFRWNGTLYPSLSAAASAIAGSRWNGPRFFGLRQRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16954; Mature: 16823
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTAVDLAGRPAGPNETGRPADCDRRVEALMDLDLEGLRAEWRRHYGSPPALRSVAILR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH MLLAWRMQASAAGGLDSDSRRQIARKGRVAAEGLELGIGGRLTRTWQGREVEVVVEAEGF HHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCEEECCCCCEEEEECCCEEEEEEEECCE RWNGTLYPSLSAAASAIAGSRWNGPRFFGLRQRRP EECCEECCCHHHHHHHHHCCCCCCCEEECCCCCCC >Mature Secondary Structure ASTAVDLAGRPAGPNETGRPADCDRRVEALMDLDLEGLRAEWRRHYGSPPALRSVAILR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH MLLAWRMQASAAGGLDSDSRRQIARKGRVAAEGLELGIGGRLTRTWQGREVEVVVEAEGF HHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCEEECCCCCEEEEECCCEEEEEEEECCE RWNGTLYPSLSAAASAIAGSRWNGPRFFGLRQRRP EECCEECCCHHHHHHHHHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA