| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199466
Identifier: 87199466
GI number: 87199466
Start: 1489133
End: 1489693
Strand: Direct
Name: 87199466
Synonym: Saro_1445
Alternate gene names: NA
Gene position: 1489133-1489693 (Clockwise)
Preceding gene: 87199465
Following gene: 87199467
Centisome position: 41.81
GC content: 65.95
Gene sequence:
>561_bases ATGTTCGACAGGATCGTCAACTGGGCGCGGGCCAACATGCCGACGCGGGAGCAGATGGAGCAGAACCGCTTCGCGCGCCC GCTTGCCGCGCGCCATGAACTCTGGCGCTTCACTCGCCGTTCGGTGCCCCGGGGCGTTGCGGCTGGCCTGTTCATCGGCA TTTTCGCGCTGATCCCGGGCGTCCAGATCGTCGGTGCCGCGCTCATGTGCGTGCCGGTGCGCGGCAACATTCCGCTGGCC GTGCTGATGACTTTCGTGTCGATCCCGCCGACGACGCTGTTCGTCTTCCTTCCCGGCGCAATCTGGGTCGGCAATCGCTT TGGCTACCACGCCGATTTCTCGACCGTGAGCGATCTCGTTACGCGAGGCGCTTCGGTCGGAGACTGGCTTGCCTGGCTTG GCAGCGATGCGGCGCCTTCGCTGATCATCGGCCTTCTGCTTATCTCGCTGGCGGCGGCCGCCATCGGTTACTTCATCTCG GCTATCGGGTGGCGCTGGTGGACGGGGCACAAGCGCAAGGCCCGGCAGATGCGTGCCGCTGCCCGGGATTTCCCCGACTG A
Upstream 100 bases:
>100_bases TTCCCTGCGGCGCTTCAGCGCGCTGAAAGAGGTGGTCGTCCAACAGTGGTCAAACGTCCCGTGGCGGGGCGGACGGGAAA CGGGTAGAACGCAAGTCACG
Downstream 100 bases:
>100_bases TGGCGTCACGCGGGGGCGACACGGCCGCCGGTCCGTCCGGCCTGGCGCCGATGCGGGACTGGCTCCTGCTGGGCGGCGCG GTTTCGGCTAGTGCTGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPGVQIVGAALMCVPVRGNIPLA VLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLVTRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFIS AIGWRWWTGHKRKARQMRAAARDFPD
Sequences:
>Translated_186_residues MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPGVQIVGAALMCVPVRGNIPLA VLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLVTRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFIS AIGWRWWTGHKRKARQMRAAARDFPD >Mature_186_residues MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPGVQIVGAALMCVPVRGNIPLA VLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLVTRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFIS AIGWRWWTGHKRKARQMRAAARDFPD
Specific function: Unknown
COG id: COG3216
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20563; Mature: 20563
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPG CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC VQIVGAALMCVPVRGNIPLAVLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLV HHHHHHHHHEEECCCCCHHHHHHHHHHCCHHHHHHHHCCHHEECCCCCCCCCHHHHHHHH TRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFISAIGWRWWTGHKRKARQMRAA HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ARDFPD HHCCCC >Mature Secondary Structure MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPG CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC VQIVGAALMCVPVRGNIPLAVLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLV HHHHHHHHHEEECCCCCHHHHHHHHHHCCHHHHHHHHCCHHEECCCCCCCCCHHHHHHHH TRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFISAIGWRWWTGHKRKARQMRAA HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ARDFPD HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA