Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199458

Identifier: 87199458

GI number: 87199458

Start: 1482804

End: 1483475

Strand: Direct

Name: 87199458

Synonym: Saro_1437

Alternate gene names: NA

Gene position: 1482804-1483475 (Clockwise)

Preceding gene: 87199456

Following gene: 87199464

Centisome position: 41.63

GC content: 62.05

Gene sequence:

>672_bases
ATGAAAAAGATCTGCGCAATCCTCGCCGCCGGCACTGCCATCGCTGCTGCTCCTGCGTACGCGCAGGACGCCACGCCCGC
CGAAGCCTTCAGCGGTTTCCACGCCGAAGCTCTCGTGGGCTATGACCACAACCGCTCCGGCAGCAGCGAAGATGTCGACA
ACACCCGCGATCTCAAGCAGTCCATCGACGGCGTCGAATACGGCGGCGCGATCGGCTATGACATTCCGCTTGGCACCAAT
CTTGTCGCCGGTGCCGAAGCTGAAATCACCGACAGCAGCGCGAGCTGGGACAACAACAACGACCAGCCCAACGTCTTCAA
CCTCGGTCGCGTCGAAGCGGGCCGCCAGTACTACGTCGGCGCCCGTCTCGGTTATGCAATGTCGCCGAGCACGATGGTCT
ATGTGAAGGGTGGCTACAGCAACGCCCGCTATAACCTTCAGGGCACCGACGGAACCACTAACCTGCGCCAGCGGCTTGAC
GCCGACGGCTACCGCGTGGGTGCCGGCGTCGAGCAGAAGGTTGGCGAGAACGCCTTTGTGAAGCTCGAGTACAAGTACGC
AAACTACAGCAAGGGCGAATTCGACTTCAACGGCGACACGCCGGACAGCAGCCGCTTCAACCTCGACACCGACCGTCATT
CGATCACCGCCGGCGTTGGCGTCCGCTTCTGA

Upstream 100 bases:

>100_bases
TGAGGTTAATGAAACTGGATCGTCCCCCGGACATTCGGACAACCACTGTCGGGTCGCATCTAGCCAAGGACCGGCAGGCA
CGTTCGAATGGAGTGAAAAC

Downstream 100 bases:

>100_bases
CGCAGTTCGGGTCGCAGCAAACGGGAAGGGCGGGCCTCGCGGCTCGCCCTTTTCGCATTGGCGAGGCTACCGGTTTGCGC
AGCCCAACGCTGCCGCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein-Like; Opacity Protein And Related Surface Antigens-Like Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTN
LVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLD
ADGYRVGAGVEQKVGENAFVKLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF

Sequences:

>Translated_223_residues
MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTN
LVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLD
ADGYRVGAGVEQKVGENAFVKLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF
>Mature_223_residues
MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTN
LVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLD
ADGYRVGAGVEQKVGENAFVKLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23900; Mature: 23900

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQ
CCHHHEEHHCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
SIDGVEYGGAIGYDIPLGTNLVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVG
HCCCCCCCCEEEECCCCCCCEECCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEE
ARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLDADGYRVGAGVEQKVGENAFV
EEECCEECCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCHHHCCCCEEE
KLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF
EEEEEECCCCCCEEECCCCCCCCCEEECCCCCCEEEECCEECC
>Mature Secondary Structure
MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQ
CCHHHEEHHCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
SIDGVEYGGAIGYDIPLGTNLVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVG
HCCCCCCCCEEEECCCCCCCEECCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEE
ARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLDADGYRVGAGVEQKVGENAFV
EEECCEECCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCHHHCCCCEEE
KLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF
EEEEEECCCCCCEEECCCCCCCCCEEECCCCCCEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA