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The map label for this gene is ldcA [C]

Identifier: 87199447

GI number: 87199447

Start: 1467912

End: 1468733

Strand: Direct

Name: ldcA [C]

Synonym: Saro_1426

Alternate gene names: 87199447

Gene position: 1467912-1468733 (Clockwise)

Preceding gene: 87199445

Following gene: 87199448

Centisome position: 41.22

GC content: 65.33

Gene sequence:

>822_bases
GTGACCAGACGCATTGCCATCTGCGCCCCGTCGACCCCGTTCACGCGCGAAGACTCCGCGCGCGTCATCGCCTTGGCTGC
GGCCGAGTTTCCGGATCTCTCGCTGTCCTTTCACGAGCAGTGCTTTGCCAGCGAAGGCCACTTCGCGGGGTCGGATGCGC
TGCGCCTCTCCGCCTTTCTCGAATGCGCCAACGACGACGCGTTCGAGGCGGTCTGGTTCGTGCGTGGGGGATACGGTGCG
AACCGTATCGCAGAGGATGCGCTGGCAAGGCTTGGACGCGCTGCGAGTGCCAAGCAGTACCTCGGCTATTCGGATGCCGG
GACCTTGCTTGCGGCGCTTTACGCGCACCGGATCGGCAGGTCGGTTCATGCGCCGATGCCTGTCGACATCCGTCGACCTG
AGGGCGAGAGCGCGGTAAGGCGGACCTTGGGGTGGCTTGCGGGCGCGCGAGAGGGGCTTGAGCCGACGCTTGGAGCTGGT
GCGCCGGCGGTCGCCTTCAACCTGATGACGCTGGCGATGCTTTGCGGGACGCGATTGTTGCCGGACCTGTCCGGGCATGT
CGTGATGATCGAGGAAGTGGCCGAGCACCACTACGCGGTCGACCGGCTGCTGTTCCATGTGACGAGCTGCCTAGCAGATG
CTGGAATTGCGGGGCTGCGGCTAGGCAGGGTCAGCGACGTGCCCGAGAACGACCGGCCGTTCGGATGCAGCGTCGAGGAA
ATGGCGCGTCATTGGTGTCACCGTGCGGGCATCGCCTTTCTTGGCACCGCCGACATCGGCCACGACGTTGACAACAGGAT
CGTGCCCTTCGGACTTGCCTGA

Upstream 100 bases:

>100_bases
GCGGTGTTCGTCATGCCATTCCGGTATGCGCCCGCGCGCCCGGTGACAACCTCGGGATTGCGGCTTCCGTCGCAGGGGCG
AACCGGTCTAGGGAGACGTG

Downstream 100 bases:

>100_bases
CAGGCAGGTGCGACATAGGGCGCACGCCGAATATCGGCGCCAAATTGGGAGTGTCAGATGCGAGCATTCGTTTTTCCGGG
GCAGGGCAGCCAGAAGGTCG

Product: peptidase U61, LD-carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTRRIAICAPSTPFTREDSARVIALAAAEFPDLSLSFHEQCFASEGHFAGSDALRLSAFLECANDDAFEAVWFVRGGYGA
NRIAEDALARLGRAASAKQYLGYSDAGTLLAALYAHRIGRSVHAPMPVDIRRPEGESAVRRTLGWLAGAREGLEPTLGAG
APAVAFNLMTLAMLCGTRLLPDLSGHVVMIEEVAEHHYAVDRLLFHVTSCLADAGIAGLRLGRVSDVPENDRPFGCSVEE
MARHWCHRAGIAFLGTADIGHDVDNRIVPFGLA

Sequences:

>Translated_273_residues
MTRRIAICAPSTPFTREDSARVIALAAAEFPDLSLSFHEQCFASEGHFAGSDALRLSAFLECANDDAFEAVWFVRGGYGA
NRIAEDALARLGRAASAKQYLGYSDAGTLLAALYAHRIGRSVHAPMPVDIRRPEGESAVRRTLGWLAGAREGLEPTLGAG
APAVAFNLMTLAMLCGTRLLPDLSGHVVMIEEVAEHHYAVDRLLFHVTSCLADAGIAGLRLGRVSDVPENDRPFGCSVEE
MARHWCHRAGIAFLGTADIGHDVDNRIVPFGLA
>Mature_272_residues
TRRIAICAPSTPFTREDSARVIALAAAEFPDLSLSFHEQCFASEGHFAGSDALRLSAFLECANDDAFEAVWFVRGGYGAN
RIAEDALARLGRAASAKQYLGYSDAGTLLAALYAHRIGRSVHAPMPVDIRRPEGESAVRRTLGWLAGAREGLEPTLGAGA
PAVAFNLMTLAMLCGTRLLPDLSGHVVMIEEVAEHHYAVDRLLFHVTSCLADAGIAGLRLGRVSDVPENDRPFGCSVEEM
ARHWCHRAGIAFLGTADIGHDVDNRIVPFGLA

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 29312; Mature: 29180

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRIAICAPSTPFTREDSARVIALAAAEFPDLSLSFHEQCFASEGHFAGSDALRLSAFL
CCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
ECANDDAFEAVWFVRGGYGANRIAEDALARLGRAASAKQYLGYSDAGTLLAALYAHRIGR
HHCCCCHHEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHCC
SVHAPMPVDIRRPEGESAVRRTLGWLAGAREGLEPTLGAGAPAVAFNLMTLAMLCGTRLL
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PDLSGHVVMIEEVAEHHYAVDRLLFHVTSCLADAGIAGLRLGRVSDVPENDRPFGCSVEE
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCHHH
MARHWCHRAGIAFLGTADIGHDVDNRIVPFGLA
HHHHHHHHCCEEEEECCCCCCCCCCCEECCCCC
>Mature Secondary Structure 
TRRIAICAPSTPFTREDSARVIALAAAEFPDLSLSFHEQCFASEGHFAGSDALRLSAFL
CCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
ECANDDAFEAVWFVRGGYGANRIAEDALARLGRAASAKQYLGYSDAGTLLAALYAHRIGR
HHCCCCHHEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHCC
SVHAPMPVDIRRPEGESAVRRTLGWLAGAREGLEPTLGAGAPAVAFNLMTLAMLCGTRLL
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PDLSGHVVMIEEVAEHHYAVDRLLFHVTSCLADAGIAGLRLGRVSDVPENDRPFGCSVEE
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCHHH
MARHWCHRAGIAFLGTADIGHDVDNRIVPFGLA
HHHHHHHHCCEEEEECCCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]