| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yfiQ [H]
Identifier: 87199445
GI number: 87199445
Start: 1465845
End: 1466378
Strand: Direct
Name: yfiQ [H]
Synonym: Saro_1424
Alternate gene names: 87199445
Gene position: 1465845-1466378 (Clockwise)
Preceding gene: 87199443
Following gene: 87199447
Centisome position: 41.16
GC content: 64.98
Gene sequence:
>534_bases ATGACGGCCGCTTCGATGAGCGATCTGGCCCCGCTGGTGCCGCTTGAGACGCGCGACGGGCTTCTGCTCGATGTCCGACC GGCCTATGCCGAAGACGAAGGCTTGCTCGCGGCTTTCTTCGAAAAGGTGAGCGACGAGGATCGCCGCTTTCGCTTCCTTG CCGCCAGCAGGAACGTTAGCCACGACCAGCTCGTCCCGCTGACGCGCGTCGACCACTGGCGCACGGAGAGCTTCCTGGCG TTCGAACGCGAGACCGGCGCACTTGTAGCGTCGGCCATGCTCGCCTGCGATGCGGTGATGGATACCGGCGAAGTGGCGGT TGCGGTCAGGCGGGACTTCCGGGGGCGGGGCGTCGGCTGGACCATGCTTGACCTGCTCGCATCGGAGGCGCGAAAGCGGG GGCTCAAGCGCGTCATCTCGATCGAGGACCGCGAAAACCATGCGGCAATCGAACTGGAGCGCGAGAAGGGCTTCGAGGCG CACGGGATCGATGGAGATCCGCATCTGGTGATGCTGGAAAAGCGCTTCGACTGA
Upstream 100 bases:
>100_bases TTGCACGAGCTTCGTGCACCGCGATTGCGATGGATCAACGAGGGAGCCGGGCAGAACGCTAAGCCGTCCGCACGGATGAA CGATCCTTAGGAGACATGAC
Downstream 100 bases:
>100_bases GCGTCCGGCGCGCCGCCCCCTAGAGCGCTTGCAGGAGGTCCCGGGCAAAAGCGGAAAGGGTGTCGTCGCGCGCGCCCATT ATCACGACACGGTCGCCCGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTAASMSDLAPLVPLETRDGLLLDVRPAYAEDEGLLAAFFEKVSDEDRRFRFLAASRNVSHDQLVPLTRVDHWRTESFLA FERETGALVASAMLACDAVMDTGEVAVAVRRDFRGRGVGWTMLDLLASEARKRGLKRVISIEDRENHAAIELEREKGFEA HGIDGDPHLVMLEKRFD
Sequences:
>Translated_177_residues MTAASMSDLAPLVPLETRDGLLLDVRPAYAEDEGLLAAFFEKVSDEDRRFRFLAASRNVSHDQLVPLTRVDHWRTESFLA FERETGALVASAMLACDAVMDTGEVAVAVRRDFRGRGVGWTMLDLLASEARKRGLKRVISIEDRENHAAIELEREKGFEA HGIDGDPHLVMLEKRFD >Mature_176_residues TAASMSDLAPLVPLETRDGLLLDVRPAYAEDEGLLAAFFEKVSDEDRRFRFLAASRNVSHDQLVPLTRVDHWRTESFLAF ERETGALVASAMLACDAVMDTGEVAVAVRRDFRGRGVGWTMLDLLASEARKRGLKRVISIEDRENHAAIELEREKGFEAH GIDGDPHLVMLEKRFD
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=147, Percent_Identity=29.2517006802721, Blast_Score=70, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 19841; Mature: 19710
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAASMSDLAPLVPLETRDGLLLDVRPAYAEDEGLLAAFFEKVSDEDRRFRFLAASRNVS CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCC HDQLVPLTRVDHWRTESFLAFERETGALVASAMLACDAVMDTGEVAVAVRRDFRGRGVGW HHHCCCCHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCH TMLDLLASEARKRGLKRVISIEDRENHAAIELEREKGFEAHGIDGDPHLVMLEKRFD HHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEHHCCCEECCCCCCCCEEEEEECCC >Mature Secondary Structure TAASMSDLAPLVPLETRDGLLLDVRPAYAEDEGLLAAFFEKVSDEDRRFRFLAASRNVS CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCC HDQLVPLTRVDHWRTESFLAFERETGALVASAMLACDAVMDTGEVAVAVRRDFRGRGVGW HHHCCCCHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCH TMLDLLASEARKRGLKRVISIEDRENHAAIELEREKGFEAHGIDGDPHLVMLEKRFD HHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEHHCCCEECCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]