| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199444
Identifier: 87199444
GI number: 87199444
Start: 1465280
End: 1465645
Strand: Reverse
Name: 87199444
Synonym: Saro_1423
Alternate gene names: NA
Gene position: 1465645-1465280 (Counterclockwise)
Preceding gene: 87199446
Following gene: 87199441
Centisome position: 41.15
GC content: 63.11
Gene sequence:
>366_bases ATGTGGCTCGATACCCATAGCGACCAATACGAGGCCCAACGCCGCGCCATCCGCGTCGGAATCGAACTTCCTGTCCGGGT CAAGCACGGCGCCACAAGGTCAACCGTCATCCTTAAGGACATGAACGTCTATGGCGCGCGCATCGAGGGGCTCGAAAAGC TGCGTGTCGGCGAACCCCTCTACCTGATGCTTCCGGGACTACAGCCCAAGCTTGCATTCGTGGTGTGGAGCCGCGACCGG GTGAGCGGCCTGGAATTCGAACATCGCCTGCACGACGAAGTGTTCCAGCTCCTCGTCAGCGACTTCGCGATCAAGCACTA CCGCGAAACCCCGCCACCGCGCAGCCCCCAGCGCCGCGCGGCCTGA
Upstream 100 bases:
>100_bases ATTCACGCCCGGGCGATTGCAAAAAACCGGAGACCGCACTGAAAAGCGCACGCCCCCCGTCGTCCTAACCCTTGTAGTTA ACGCAAGGGGAGGACTTGTC
Downstream 100 bases:
>100_bases TCCGACCGAAAATCAATGCTTCGCGCCGCGCATGTGCCCCACGACATGCACGACGACGGCCACGACCGCCCCCAGCACCA CGCCGACCAGCGCCGAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MWLDTHSDQYEAQRRAIRVGIELPVRVKHGATRSTVILKDMNVYGARIEGLEKLRVGEPLYLMLPGLQPKLAFVVWSRDR VSGLEFEHRLHDEVFQLLVSDFAIKHYRETPPPRSPQRRAA
Sequences:
>Translated_121_residues MWLDTHSDQYEAQRRAIRVGIELPVRVKHGATRSTVILKDMNVYGARIEGLEKLRVGEPLYLMLPGLQPKLAFVVWSRDR VSGLEFEHRLHDEVFQLLVSDFAIKHYRETPPPRSPQRRAA >Mature_121_residues MWLDTHSDQYEAQRRAIRVGIELPVRVKHGATRSTVILKDMNVYGARIEGLEKLRVGEPLYLMLPGLQPKLAFVVWSRDR VSGLEFEHRLHDEVFQLLVSDFAIKHYRETPPPRSPQRRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14058; Mature: 14058
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLDTHSDQYEAQRRAIRVGIELPVRVKHGATRSTVILKDMNVYGARIEGLEKLRVGEPL CCCCCCCHHHHHHHHHEEECCCCCEEECCCCCCEEEEEECCCCCCHHHHCHHHHCCCCCE YLMLPGLQPKLAFVVWSRDRVSGLEFEHRLHDEVFQLLVSDFAIKHYRETPPPRSPQRRA EEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC A C >Mature Secondary Structure MWLDTHSDQYEAQRRAIRVGIELPVRVKHGATRSTVILKDMNVYGARIEGLEKLRVGEPL CCCCCCCHHHHHHHHHEEECCCCCEEECCCCCCEEEEEECCCCCCHHHHCHHHHCCCCCE YLMLPGLQPKLAFVVWSRDRVSGLEFEHRLHDEVFQLLVSDFAIKHYRETPPPRSPQRRA EEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA