| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is mlaA [H]
Identifier: 87199380
GI number: 87199380
Start: 1406057
End: 1407109
Strand: Direct
Name: mlaA [H]
Synonym: Saro_1359
Alternate gene names: 87199380
Gene position: 1406057-1407109 (Clockwise)
Preceding gene: 87199379
Following gene: 87199382
Centisome position: 39.48
GC content: 64.67
Gene sequence:
>1053_bases TTGAGCGTGACCTTGCTTGCCAGTGCTGCCCTGCTTGCCGTGCCAGGTGTGGATGCGAGCGCGACGCCTGACCAGGTCGC CGTGCAGGCACAGGTCGCTCAATCCGCACCGGCAAGCGAGGCTGCCGCCCCGCCCGCCGAAGCGCCCGCTCAAACGCCCA GCGTTTCCCAGACTTCGGTCGAGGTTGCCCTGCCGCAGGCACCGGCACCCTCACTTGACCAGATCGAGCAGGAGCAGGAC GGGATCGTCGTCTCGGGCGAACGCACGCCGCCTCAGGACCCGATGCAGTCGGTCAACCAAGCCAGCTACGATGCGGTGCA GGCGGTGGACGATGCGGTGATCGCGCCGGTCGCGCAGGTCTATGAGAAGGGCGTGCCGCGCCCCTTGCGGATGGGCCTGC GCAATTTCCTGCGCAATCTGACCGAACCCATCGTCGCGCTGAATTTCCTGTTGCAGCTCAAGCCGGGCAAGGCGGCTGAA ACGGTCGGGCGGTTTGCCGTCAATTCGACCGTCGGCGTCGGTGGGCTTGTCGACGTCGCGAAGAAGAAGCCTTTCAACCT GCCTTACCGTCGTAACGGCTTCGCCTATACGATGGGCTACTATGGCATAGGGCCAGGGCCCTACATGTTTCTGCCGCTTG TCGGTCCGACGACGCTGCGCGATGTCATCGGGCTTGGGCTGGACCGTTTCCTGCTGCCGTTCGCGGTTGGCGGCCCGCTG CGCCATCCCGGGTATGTCTATGGCAGCTTCGTGATCCGCTCCCTTGACGAGCGCGTTATGAACGATGAATTGTTCAAGCG TATTCGCGAGGAATCAAATCCTTATGCGAGCTATCGCGAGCTTTATCTGAAGTCTAGGCAAGCCGAGATCGACGCGCTCA AGGGCAAGGCGGACTTCCAGAAGGAGGGGACCATCAAGCTGCCGGCGATCACGCCGACGACGCCCCCCGTCCTGCCGCCG GCGCCCCCGGAAGCCGCGCCGCAGACTGCCGCCACGCCAGCGCCGGTCTTCATTTCCGAACCTGTGGTGCAGCCTCTGCC GACCGGCGGCTGA
Upstream 100 bases:
>100_bases CCCCGGCTTCAAGTTGCCGTTCTGAGCGGCAGGCAGTCCAGATGCTGGCGCGCAGCGTCGAATATGCGCTGTATTTTGTT GAATTGACGGGAATTTGTTC
Downstream 100 bases:
>100_bases ACGCGTTCAGCTTTCCAGCAGAAGCGAGTAATCGCGCAGGACTTCCCAGGCCTTGTTGGGCGACATCATCAGCAGGTCTT CGGATTCGAGCCCTGCCAGC
Product: VacJ-like lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSVTLLASAALLAVPGVDASATPDQVAVQAQVAQSAPASEAAAPPAEAPAQTPSVSQTSVEVALPQAPAPSLDQIEQEQD GIVVSGERTPPQDPMQSVNQASYDAVQAVDDAVIAPVAQVYEKGVPRPLRMGLRNFLRNLTEPIVALNFLLQLKPGKAAE TVGRFAVNSTVGVGGLVDVAKKKPFNLPYRRNGFAYTMGYYGIGPGPYMFLPLVGPTTLRDVIGLGLDRFLLPFAVGGPL RHPGYVYGSFVIRSLDERVMNDELFKRIREESNPYASYRELYLKSRQAEIDALKGKADFQKEGTIKLPAITPTTPPVLPP APPEAAPQTAATPAPVFISEPVVQPLPTGG
Sequences:
>Translated_350_residues MSVTLLASAALLAVPGVDASATPDQVAVQAQVAQSAPASEAAAPPAEAPAQTPSVSQTSVEVALPQAPAPSLDQIEQEQD GIVVSGERTPPQDPMQSVNQASYDAVQAVDDAVIAPVAQVYEKGVPRPLRMGLRNFLRNLTEPIVALNFLLQLKPGKAAE TVGRFAVNSTVGVGGLVDVAKKKPFNLPYRRNGFAYTMGYYGIGPGPYMFLPLVGPTTLRDVIGLGLDRFLLPFAVGGPL RHPGYVYGSFVIRSLDERVMNDELFKRIREESNPYASYRELYLKSRQAEIDALKGKADFQKEGTIKLPAITPTTPPVLPP APPEAAPQTAATPAPVFISEPVVQPLPTGG >Mature_349_residues SVTLLASAALLAVPGVDASATPDQVAVQAQVAQSAPASEAAAPPAEAPAQTPSVSQTSVEVALPQAPAPSLDQIEQEQDG IVVSGERTPPQDPMQSVNQASYDAVQAVDDAVIAPVAQVYEKGVPRPLRMGLRNFLRNLTEPIVALNFLLQLKPGKAAET VGRFAVNSTVGVGGLVDVAKKKPFNLPYRRNGFAYTMGYYGIGPGPYMFLPLVGPTTLRDVIGLGLDRFLLPFAVGGPLR HPGYVYGSFVIRSLDERVMNDELFKRIREESNPYASYRELYLKSRQAEIDALKGKADFQKEGTIKLPAITPTTPPVLPPA PPEAAPQTAATPAPVFISEPVVQPLPTGG
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=199, Percent_Identity=34.6733668341709, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 37113; Mature: 36982
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTLLASAALLAVPGVDASATPDQVAVQAQVAQSAPASEAAAPPAEAPAQTPSVSQTSV CCEEHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE EVALPQAPAPSLDQIEQEQDGIVVSGERTPPQDPMQSVNQASYDAVQAVDDAVIAPVAQV EEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YEKGVPRPLRMGLRNFLRNLTEPIVALNFLLQLKPGKAAETVGRFAVNSTVGVGGLVDVA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHH KKKPFNLPYRRNGFAYTMGYYGIGPGPYMFLPLVGPTTLRDVIGLGLDRFLLPFAVGGPL HCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHCCCCC RHPGYVYGSFVIRSLDERVMNDELFKRIREESNPYASYRELYLKSRQAEIDALKGKADFQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KEGTIKLPAITPTTPPVLPPAPPEAAPQTAATPAPVFISEPVVQPLPTGG CCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure SVTLLASAALLAVPGVDASATPDQVAVQAQVAQSAPASEAAAPPAEAPAQTPSVSQTSV CEEHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE EVALPQAPAPSLDQIEQEQDGIVVSGERTPPQDPMQSVNQASYDAVQAVDDAVIAPVAQV EEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YEKGVPRPLRMGLRNFLRNLTEPIVALNFLLQLKPGKAAETVGRFAVNSTVGVGGLVDVA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHH KKKPFNLPYRRNGFAYTMGYYGIGPGPYMFLPLVGPTTLRDVIGLGLDRFLLPFAVGGPL HCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHCCCCC RHPGYVYGSFVIRSLDERVMNDELFKRIREESNPYASYRELYLKSRQAEIDALKGKADFQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KEGTIKLPAITPTTPPVLPPAPPEAAPQTAATPAPVFISEPVVQPLPTGG CCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]