| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is gloB [H]
Identifier: 87199342
GI number: 87199342
Start: 1364792
End: 1365556
Strand: Reverse
Name: gloB [H]
Synonym: Saro_1321
Alternate gene names: 87199342
Gene position: 1365556-1364792 (Counterclockwise)
Preceding gene: 87199343
Following gene: 87199341
Centisome position: 38.34
GC content: 68.89
Gene sequence:
>765_bases ATGACGCTAGAGATCCACCAGTTCCCGTGCCTGTCCGACAACTACGGCTTCCTCGTCCACGATTCCGACAGCGGCGAGAC CGCGTGCATCGACACGCCCGATGCCGAAGCCTACCTGCGCGAGGCAAACGCCAGAGGCTGGCGGATCACGCAGATCTGGA ACACGCACTGGCACCCCGACCATGCGGGCGGCAACGAGGCGATCAAGGCGGCAACCGGATGCACCGTCGTCGCGCCCGAG GATGACGCCGGCAAGATCGCGGGCGTGGACCGCGCCGTCGCGCATGGCGATACCGTGCAGCTTGGCAGCTTCACCGCCGA GGTGATCGACGTCGGCGGGCATACCATGGGCCACTGCGCCTACCACCTGCCGGAAGCCTCCGTCGCGTTCGTCGGCGACG CGCTGTTCCCGCTGGGCTGCGGCCGCATGTTCGAGGGGACGCCGCCACAGTTCTGGGCCAGCCTCTCGCGCATCAAGGCC CTGCCCCCCGGGACGACGCTCTACAGCGCTCACGAATATACCCAGTCCAACGCCCGCTTCGCGCTTCACGCCGATCCCGA CAATGCCGCGCTGCGCGCTTATGCGGACGGGGTCGAAGCAAGGCGCGCGCGCGGCGAATGGACCGTGCCCACGACGCTTG CCGCCGAACTCGCGGCGAACCCCTTCCTGCGCGCCGATACGCCCGGGATGGCCGCGCGCTGGGGCGGGTCTTCGCCCGTC GACACATTTGCCGCCCTGCGCGCCGCCAAGGATACTTTCCGCTGA
Upstream 100 bases:
>100_bases AGCAGTAAGCTTCACCGCCTTCAAGGCACCAGAAGCAAGGCCCGTCCGGAGAAATCCGGGCGGGCTTTTGCTTTGCCGGC ACTGCGGCTAAGCTCGGGCC
Downstream 100 bases:
>100_bases CGCCGATCCTGCTAAAGGGGTGTTGACCGGGGGAAAGCCTAATGCCGAGCGACAGGAAGATCATCCGCGTAACGTCGTTC GACGTGGCCGAAGCGGCGGG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTLEIHQFPCLSDNYGFLVHDSDSGETACIDTPDAEAYLREANARGWRITQIWNTHWHPDHAGGNEAIKAATGCTVVAPE DDAGKIAGVDRAVAHGDTVQLGSFTAEVIDVGGHTMGHCAYHLPEASVAFVGDALFPLGCGRMFEGTPPQFWASLSRIKA LPPGTTLYSAHEYTQSNARFALHADPDNAALRAYADGVEARRARGEWTVPTTLAAELAANPFLRADTPGMAARWGGSSPV DTFAALRAAKDTFR
Sequences:
>Translated_254_residues MTLEIHQFPCLSDNYGFLVHDSDSGETACIDTPDAEAYLREANARGWRITQIWNTHWHPDHAGGNEAIKAATGCTVVAPE DDAGKIAGVDRAVAHGDTVQLGSFTAEVIDVGGHTMGHCAYHLPEASVAFVGDALFPLGCGRMFEGTPPQFWASLSRIKA LPPGTTLYSAHEYTQSNARFALHADPDNAALRAYADGVEARRARGEWTVPTTLAAELAANPFLRADTPGMAARWGGSSPV DTFAALRAAKDTFR >Mature_253_residues TLEIHQFPCLSDNYGFLVHDSDSGETACIDTPDAEAYLREANARGWRITQIWNTHWHPDHAGGNEAIKAATGCTVVAPED DAGKIAGVDRAVAHGDTVQLGSFTAEVIDVGGHTMGHCAYHLPEASVAFVGDALFPLGCGRMFEGTPPQFWASLSRIKAL PPGTTLYSAHEYTQSNARFALHADPDNAALRAYADGVEARRARGEWTVPTTLAAELAANPFLRADTPGMAARWGGSSPVD TFAALRAAKDTFR
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=260, Percent_Identity=35.7692307692308, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI94538320, Length=259, Percent_Identity=35.5212355212355, Blast_Score=168, Evalue=4e-42, Organism=Homo sapiens, GI14150041, Length=257, Percent_Identity=32.295719844358, Blast_Score=134, Evalue=8e-32, Organism=Homo sapiens, GI116642887, Length=228, Percent_Identity=32.8947368421053, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI21703352, Length=228, Percent_Identity=32.8947368421053, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI46361987, Length=205, Percent_Identity=32.6829268292683, Blast_Score=113, Evalue=1e-25, Organism=Homo sapiens, GI41327741, Length=175, Percent_Identity=32, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1786406, Length=256, Percent_Identity=34.375, Blast_Score=134, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17536925, Length=252, Percent_Identity=33.7301587301587, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320478, Length=263, Percent_Identity=26.9961977186312, Blast_Score=79, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324614, Length=234, Percent_Identity=28.2051282051282, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI21356335, Length=260, Percent_Identity=35, Blast_Score=166, Evalue=9e-42, Organism=Drosophila melanogaster, GI24667711, Length=260, Percent_Identity=35, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI24667703, Length=260, Percent_Identity=35, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI221330176, Length=168, Percent_Identity=32.1428571428571, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 27179; Mature: 27048
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEIHQFPCLSDNYGFLVHDSDSGETACIDTPDAEAYLREANARGWRITQIWNTHWHPD CEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCC HAGGNEAIKAATGCTVVAPEDDAGKIAGVDRAVAHGDTVQLGSFTAEVIDVGGHTMGHCA CCCCCHHEEHHCCEEEECCCCCCCCCCCCCHHHHCCCEEEECCCEEEEEECCCCCCCCEE YHLPEASVAFVGDALFPLGCGRMFEGTPPQFWASLSRIKALPPGTTLYSAHEYTQSNARF EECCCCCEEHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCEE ALHADPDNAALRAYADGVEARRARGEWTVPTTLAAELAANPFLRADTPGMAARWGGSSPV EEEECCCCCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCEEECCCCCCH DTFAALRAAKDTFR HHHHHHHHHHHHCC >Mature Secondary Structure TLEIHQFPCLSDNYGFLVHDSDSGETACIDTPDAEAYLREANARGWRITQIWNTHWHPD EEEECCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCC HAGGNEAIKAATGCTVVAPEDDAGKIAGVDRAVAHGDTVQLGSFTAEVIDVGGHTMGHCA CCCCCHHEEHHCCEEEECCCCCCCCCCCCCHHHHCCCEEEECCCEEEEEECCCCCCCCEE YHLPEASVAFVGDALFPLGCGRMFEGTPPQFWASLSRIKALPPGTTLYSAHEYTQSNARF EECCCCCEEHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCEE ALHADPDNAALRAYADGVEARRARGEWTVPTTLAAELAANPFLRADTPGMAARWGGSSPV EEEECCCCCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCEEECCCCCCH DTFAALRAAKDTFR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA