| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199309
Identifier: 87199309
GI number: 87199309
Start: 1330636
End: 1331544
Strand: Direct
Name: 87199309
Synonym: Saro_1288
Alternate gene names: NA
Gene position: 1330636-1331544 (Clockwise)
Preceding gene: 87199304
Following gene: 87199312
Centisome position: 37.36
GC content: 68.65
Gene sequence:
>909_bases GTGCCTGGAAATCCGGGCGTACCGGCCTATACCCTGAAGCTGACGGACCCTTCACCGATCCCGGTCGTGATCGCAGTTCC CCATGCCGGGCGCGCCTATGCCAAGTCGCTACTGGACCGCATGCGCCATCCCGGCTTTGCCGCGCCGCGTCTGGAGGATC GCTATGCCGACCTTCTGGGCGAAGCGGTCTCGCGCCACACGGGGGCGGCACTCCTGATCGCCCATGCCCCGCGCGCCATG CTCGATCTCAACCGGGCGAGCGATGACGTCGATTGGGAAATGCTTGGCGGCGCCCCTGCCGATGCTTCGGCGGCGCCCAG TGCCTTCGGGCGGCGTGCCCGCAGCGGCCTCGGCCTGATTCCGCGCCGCCTTCCGGGGCTCGGCGAATTGTGGAAGCGGC GGCTCGATCATGGCGAACTGACGGAACGCATCGCCTCGATCCATCAACCCTATCACGGCGCGCTCGCCGCGACGCTGGAG CAGATTCGTGATCGCTGGGGCGCGGCACTGCTGGTCGATCTCCACTCGATGCCGCCGCTTGCCGCGCGCTCGCCGGGAGA GAAGGCGCCCGAATTTGTCGTGGGTGATCGCTTCGGTGCGTCCTGCGATGGCGGGATTGTCGCCTCGGCGTTCAGCTACC TTACCGAATCGGCCCGCCGAGCGGCGCATAACCGGCCATACGCCGGTGGCTACGTGCTGGAACGCCATGCCTGTCGCCAC GAAGGCCTGCACTGCCTCCAGCTCGAGATCGACCGCACCTGCTACCTCGATTCGCGCATGGCAGAGCCCGGTCCCGGCTT CCAGGCCACCGTCGAGCTTCTCATCGGCCTGGTACGGCGCCTCGCGGTCGACGTAGCCGATCTTGGCCGCACCTCGGACC GGGGCCGCTGGCGGGCCGCTGCGGAGTAG
Upstream 100 bases:
>100_bases CGGACCTTCTTTTGACTTCATCGCGAATCGGTTGCACCCTTGTGCAATGCATCATCCGGGCGACCATGGGGGCGATTCGA CGCAGGTCCAGGGAGGATCG
Downstream 100 bases:
>100_bases GCTGCCGGACGTCCGGCGCGTCCACGCCGCCTAGGTCCTGACCCTAATCTTTTCGACAGAATCCGTGCGCACCTGCGCTA TCCACCGCACGCAAGAAAAA
Product: N-formylglutamate amidohydrolase
Products: NA
Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Deformylase; Hydrolase; Formiminoglutamase; N-Formylglutamate Amidohydrolase Superfamily; N-Formylglutamate Amidohydrolase Family; N-Formylglutamate Amidohydrolase Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPGNPGVPAYTLKLTDPSPIPVVIAVPHAGRAYAKSLLDRMRHPGFAAPRLEDRYADLLGEAVSRHTGAALLIAHAPRAM LDLNRASDDVDWEMLGGAPADASAAPSAFGRRARSGLGLIPRRLPGLGELWKRRLDHGELTERIASIHQPYHGALAATLE QIRDRWGAALLVDLHSMPPLAARSPGEKAPEFVVGDRFGASCDGGIVASAFSYLTESARRAAHNRPYAGGYVLERHACRH EGLHCLQLEIDRTCYLDSRMAEPGPGFQATVELLIGLVRRLAVDVADLGRTSDRGRWRAAAE
Sequences:
>Translated_302_residues MPGNPGVPAYTLKLTDPSPIPVVIAVPHAGRAYAKSLLDRMRHPGFAAPRLEDRYADLLGEAVSRHTGAALLIAHAPRAM LDLNRASDDVDWEMLGGAPADASAAPSAFGRRARSGLGLIPRRLPGLGELWKRRLDHGELTERIASIHQPYHGALAATLE QIRDRWGAALLVDLHSMPPLAARSPGEKAPEFVVGDRFGASCDGGIVASAFSYLTESARRAAHNRPYAGGYVLERHACRH EGLHCLQLEIDRTCYLDSRMAEPGPGFQATVELLIGLVRRLAVDVADLGRTSDRGRWRAAAE >Mature_301_residues PGNPGVPAYTLKLTDPSPIPVVIAVPHAGRAYAKSLLDRMRHPGFAAPRLEDRYADLLGEAVSRHTGAALLIAHAPRAML DLNRASDDVDWEMLGGAPADASAAPSAFGRRARSGLGLIPRRLPGLGELWKRRLDHGELTERIASIHQPYHGALAATLEQ IRDRWGAALLVDLHSMPPLAARSPGEKAPEFVVGDRFGASCDGGIVASAFSYLTESARRAAHNRPYAGGYVLERHACRHE GLHCLQLEIDRTCYLDSRMAEPGPGFQATVELLIGLVRRLAVDVADLGRTSDRGRWRAAAE
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32628; Mature: 32496
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGNPGVPAYTLKLTDPSPIPVVIAVPHAGRAYAKSLLDRMRHPGFAAPRLEDRYADLLG CCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH EAVSRHTGAALLIAHAPRAMLDLNRASDDVDWEMLGGAPADASAAPSAFGRRARSGLGLI HHHHHHCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC PRRLPGLGELWKRRLDHGELTERIASIHQPYHGALAATLEQIRDRWGAALLVDLHSMPPL HHHCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCC AARSPGEKAPEFVVGDRFGASCDGGIVASAFSYLTESARRAAHNRPYAGGYVLERHACRH CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH EGLHCLQLEIDRTCYLDSRMAEPGPGFQATVELLIGLVRRLAVDVADLGRTSDRGRWRAA CCCEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AE CC >Mature Secondary Structure PGNPGVPAYTLKLTDPSPIPVVIAVPHAGRAYAKSLLDRMRHPGFAAPRLEDRYADLLG CCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH EAVSRHTGAALLIAHAPRAMLDLNRASDDVDWEMLGGAPADASAAPSAFGRRARSGLGLI HHHHHHCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC PRRLPGLGELWKRRLDHGELTERIASIHQPYHGALAATLEQIRDRWGAALLVDLHSMPPL HHHCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCC AARSPGEKAPEFVVGDRFGASCDGGIVASAFSYLTESARRAAHNRPYAGGYVLERHACRH CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH EGLHCLQLEIDRTCYLDSRMAEPGPGFQATVELLIGLVRRLAVDVADLGRTSDRGRWRAA CCCEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA