| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fusA [C]
Identifier: 87199298
GI number: 87199298
Start: 1316192
End: 1318252
Strand: Reverse
Name: fusA [C]
Synonym: Saro_1277
Alternate gene names: 87199298
Gene position: 1318252-1316192 (Counterclockwise)
Preceding gene: 87199301
Following gene: 87199295
Centisome position: 37.01
GC content: 67.88
Gene sequence:
>2061_bases ATGGGCGACACCACAAATACAGGCACCACCCCTCACGGCAGCAGGCCAGGCCGGACCGGCAGCGCGCCGCGCATGATCGC GCTGGTCGGTCCGGCAGGAACCGGCAAGACCACTCTCGCCGAGGCCCTGCTTCACGCGAGCGGCGCGATCAACCGGCAGG GGAGCGTCGAGGCGGGCACATCCGTCGGCGATGCATCACCCGAGGCGCGGGCGCGGCGAGGATCGACCGAACTGAACCTG TGCCGCCTTGAATATCTCGGCGACACCTTTGTCCTTGCCGATGCCCCCGGCAGTACCGGTTTCGCCGTCGATGCCGATCT TGCGCTGCAGATGGCGGACATGGCGATCGTGGTCGTCGATCCGGTGGCGGATCGGGCGGCGCTGGCCGGCCCGATCCTGC GCCGGCTCGACGAACTCGAATTGCCACACGCGATCTTCGTCAACAGGATGGACGGAGCGCGGGCGGGCTCTGTGCGCGAG ATCCTGTCCGCGCTCCAGCCCCTCAGCCGCGAGCCGCTGATGCTGCGGCAGTTTCCGATCCGGCAGGGCGAGGAAATTAC CGGGTTCGTCGACGTCGCACTCGAACGCGCGTGGCGCTACCGTCCCGGCCAGCCCTCCGAACCCATTCCCATGCCCGAGG ACGTGGGCCTGCGCGAAAAAGGCGAACGCCAGCAATTGCTCGAAACCCTGGCGGACTTCGACGACGCGCTGATGGAAGCC CTGCTGATGGACGAGGAGCCGGACCCAGCCACGATCCTTGCCGACCTCGCGGTCGATACGGCGACGAACCGCGTGGTCCC CGTACTGTTCGGCTCCGCGCTTACGGGAGGAGGAATGCGCCGCCTGCTCAAGCTGCTGCGACACGAAGCTCCAGATCCCC ACGCCGCCGCCGCGCGTCTGGGACTGGACGACGAGCCGGCGCTTGCGGTGTTCAAGGTAACGACGGGCGGTGCGATGGGC CGTCTGGCGCTGGGTCGTGTGTTCGGAGCCGCATTGCGTGAAGGCACCGAACTTGCGGGAACGCGGGTCGGGTCGCTGTT CCGGATGCAGGGCGACAAGACCAACAAGACCGCCGATGCAGATGCCGGCGATGTCGTCGCTGTGGCCAAGCTCGAGCAAG CAAGGCCTGGCACGATCCTTGGGCGTTCGGGGCTTCTGGCGGAATTGACGCCCGCGATCCCGGCACGCAACACCGCGCTC GCCATCGCCACGCGCGACCGGCGCGACGACGTGAAGCTATCGGCGGCGCTGCACCGTCTTTGCGAGGAAGACCCGGCACT TGCCTGGGAGCAGGACGGCGACAGCCACGAGACCCTGCTTCGCGGGATCAACGACGAGCATCTTGCCGTTGTCCTGGCGC GGTTGAAGCGGCGTTACGGGGTGGAGGTCACTTCATCGCCGCCCCGCGTCGCCTACCGCGAGACCATCCGCAAGGAAGCC GGCGCGCGAGGACGCCACAAGAAGCAATCGGGCGGGCATGGCCAGTTCGGCGACGCGGTGATCGAAATTCGCCCCCTTTC GCGCGGTGAAGGATTCGCCTTCGAGGACCGGATCACCGGCGGAGCCATCCCCAGGCAATGGATCCCGGCAGTCGAAGCGG GCGCGCGCGATGCGATGATGAAAGGACCGCTCGGCTTCCCCGTGGTCGACGTCGCGGTGACCTTGCTCGACGGGTCGTTC CATTCGGTGGACAGCTCGGAACTTGCGTTCCGGACCGCCGGCCGCATGGCGATGGCCGAGGCACTGGAAAAGGCCTCGCC ATGCCTGCTCGAACCCGTCTTTCGGGTCAGCGTGGACATGCCGGCGGGGACCGGCGCGAAGGCCGGGTCGGCGCTTTCGG CACGGCGCGGCCAGATCCTCGGCCTCGACCAGCATCCTGAGTGGGAGCGCTGGGAGCGCGTCGAGGCGCTGTTGCCCGAA GCGGCGTTGCACGGGCTCGACGCAGAATTGCGCGCGTTGAGCCAGGGTCTCGCGAGCTTCACCGCGACGTTCGACCACAT GACTGAACTGGCGGGCAAGCACGCGGACGATGCCATCCGCATGCAGGCCAAGGCCGCTTGA
Upstream 100 bases:
>100_bases GCTTGCGACTCAGGGCCATGAGGCAGACCATCGGTTCAGGTCCCTTGCGCGTCAGGGCACTCCGTACAGCGCCCGGCGCG CCCCCGCAGGAGAGGCGACG
Downstream 100 bases:
>100_bases TGCCAACGGAGGGCCCCGAAGGCGACGACTACATGTTGAAGTAGGCGCCGCCCTTCTCCCGCGCCCGCTGCCAGGCGGGG CGTGCATGGACCGCTGCCAC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MGDTTNTGTTPHGSRPGRTGSAPRMIALVGPAGTGKTTLAEALLHASGAINRQGSVEAGTSVGDASPEARARRGSTELNL CRLEYLGDTFVLADAPGSTGFAVDADLALQMADMAIVVVDPVADRAALAGPILRRLDELELPHAIFVNRMDGARAGSVRE ILSALQPLSREPLMLRQFPIRQGEEITGFVDVALERAWRYRPGQPSEPIPMPEDVGLREKGERQQLLETLADFDDALMEA LLMDEEPDPATILADLAVDTATNRVVPVLFGSALTGGGMRRLLKLLRHEAPDPHAAAARLGLDDEPALAVFKVTTGGAMG RLALGRVFGAALREGTELAGTRVGSLFRMQGDKTNKTADADAGDVVAVAKLEQARPGTILGRSGLLAELTPAIPARNTAL AIATRDRRDDVKLSAALHRLCEEDPALAWEQDGDSHETLLRGINDEHLAVVLARLKRRYGVEVTSSPPRVAYRETIRKEA GARGRHKKQSGGHGQFGDAVIEIRPLSRGEGFAFEDRITGGAIPRQWIPAVEAGARDAMMKGPLGFPVVDVAVTLLDGSF HSVDSSELAFRTAGRMAMAEALEKASPCLLEPVFRVSVDMPAGTGAKAGSALSARRGQILGLDQHPEWERWERVEALLPE AALHGLDAELRALSQGLASFTATFDHMTELAGKHADDAIRMQAKAA
Sequences:
>Translated_686_residues MGDTTNTGTTPHGSRPGRTGSAPRMIALVGPAGTGKTTLAEALLHASGAINRQGSVEAGTSVGDASPEARARRGSTELNL CRLEYLGDTFVLADAPGSTGFAVDADLALQMADMAIVVVDPVADRAALAGPILRRLDELELPHAIFVNRMDGARAGSVRE ILSALQPLSREPLMLRQFPIRQGEEITGFVDVALERAWRYRPGQPSEPIPMPEDVGLREKGERQQLLETLADFDDALMEA LLMDEEPDPATILADLAVDTATNRVVPVLFGSALTGGGMRRLLKLLRHEAPDPHAAAARLGLDDEPALAVFKVTTGGAMG RLALGRVFGAALREGTELAGTRVGSLFRMQGDKTNKTADADAGDVVAVAKLEQARPGTILGRSGLLAELTPAIPARNTAL AIATRDRRDDVKLSAALHRLCEEDPALAWEQDGDSHETLLRGINDEHLAVVLARLKRRYGVEVTSSPPRVAYRETIRKEA GARGRHKKQSGGHGQFGDAVIEIRPLSRGEGFAFEDRITGGAIPRQWIPAVEAGARDAMMKGPLGFPVVDVAVTLLDGSF HSVDSSELAFRTAGRMAMAEALEKASPCLLEPVFRVSVDMPAGTGAKAGSALSARRGQILGLDQHPEWERWERVEALLPE AALHGLDAELRALSQGLASFTATFDHMTELAGKHADDAIRMQAKAA >Mature_685_residues GDTTNTGTTPHGSRPGRTGSAPRMIALVGPAGTGKTTLAEALLHASGAINRQGSVEAGTSVGDASPEARARRGSTELNLC RLEYLGDTFVLADAPGSTGFAVDADLALQMADMAIVVVDPVADRAALAGPILRRLDELELPHAIFVNRMDGARAGSVREI LSALQPLSREPLMLRQFPIRQGEEITGFVDVALERAWRYRPGQPSEPIPMPEDVGLREKGERQQLLETLADFDDALMEAL LMDEEPDPATILADLAVDTATNRVVPVLFGSALTGGGMRRLLKLLRHEAPDPHAAAARLGLDDEPALAVFKVTTGGAMGR LALGRVFGAALREGTELAGTRVGSLFRMQGDKTNKTADADAGDVVAVAKLEQARPGTILGRSGLLAELTPAIPARNTALA IATRDRRDDVKLSAALHRLCEEDPALAWEQDGDSHETLLRGINDEHLAVVLARLKRRYGVEVTSSPPRVAYRETIRKEAG ARGRHKKQSGGHGQFGDAVIEIRPLSRGEGFAFEDRITGGAIPRQWIPAVEAGARDAMMKGPLGFPVVDVAVTLLDGSFH SVDSSELAFRTAGRMAMAEALEKASPCLLEPVFRVSVDMPAGTGAKAGSALSARRGQILGLDQHPEWERWERVEALLPEA ALHGLDAELRALSQGLASFTATFDHMTELAGKHADDAIRMQAKAA
Specific function: This Protein Promotes The GTP-Dependent Translocation Of The Nascent Protein Chain From The A-Site To The P-Site Of The Ribosome. [C]
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=701, Percent_Identity=28.2453637660485, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI19923640, Length=693, Percent_Identity=26.984126984127, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI25306287, Length=254, Percent_Identity=30.3149606299213, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI25306283, Length=327, Percent_Identity=29.3577981651376, Blast_Score=95, Evalue=2e-19, Organism=Escherichia coli, GI1789738, Length=699, Percent_Identity=30.0429184549356, Blast_Score=286, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17533571, Length=675, Percent_Identity=27.4074074074074, Blast_Score=241, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17556745, Length=670, Percent_Identity=23.7313432835821, Blast_Score=121, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6323098, Length=676, Percent_Identity=29.1420118343195, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6322359, Length=704, Percent_Identity=22.4431818181818, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24582462, Length=698, Percent_Identity=28.9398280802292, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI221458488, Length=694, Percent_Identity=25.2161383285303, Blast_Score=148, Evalue=1e-35,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 73042; Mature: 72911
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDTTNTGTTPHGSRPGRTGSAPRMIALVGPAGTGKTTLAEALLHASGAINRQGSVEAGT CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC SVGDASPEARARRGSTELNLCRLEYLGDTFVLADAPGSTGFAVDADLALQMADMAIVVVD CCCCCCCHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCEECHHHHHHHCCEEEEEEC PVADRAALAGPILRRLDELELPHAIFVNRMDGARAGSVREILSALQPLSREPLMLRQFPI CCHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCC RQGEEITGFVDVALERAWRYRPGQPSEPIPMPEDVGLREKGERQQLLETLADFDDALMEA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LLMDEEPDPATILADLAVDTATNRVVPVLFGSALTGGGMRRLLKLLRHEAPDPHAAAARL HHCCCCCCCHHHHHHHHHHHCCCCEEHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHC GLDDEPALAVFKVTTGGAMGRLALGRVFGAALREGTELAGTRVGSLFRMQGDKTNKTADA CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCC DAGDVVAVAKLEQARPGTILGRSGLLAELTPAIPARNTALAIATRDRRDDVKLSAALHRL CCCCEEEEEEHHCCCCCEEECCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH CEEDPALAWEQDGDSHETLLRGINDEHLAVVLARLKRRYGVEVTSSPPRVAYRETIRKEA HCCCCCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHH GARGRHKKQSGGHGQFGDAVIEIRPLSRGEGFAFEDRITGGAIPRQWIPAVEAGARDAMM CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCHHHCCHHHCCCHHHHH KGPLGFPVVDVAVTLLDGSFHSVDSSELAFRTAGRMAMAEALEKASPCLLEPVFRVSVDM CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHEEECC PAGTGAKAGSALSARRGQILGLDQHPEWERWERVEALLPEAALHGLDAELRALSQGLASF CCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TATFDHMTELAGKHADDAIRMQAKAA HHHHHHHHHHHCCCCCHHHHHHCCCC >Mature Secondary Structure GDTTNTGTTPHGSRPGRTGSAPRMIALVGPAGTGKTTLAEALLHASGAINRQGSVEAGT CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC SVGDASPEARARRGSTELNLCRLEYLGDTFVLADAPGSTGFAVDADLALQMADMAIVVVD CCCCCCCHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCEECHHHHHHHCCEEEEEEC PVADRAALAGPILRRLDELELPHAIFVNRMDGARAGSVREILSALQPLSREPLMLRQFPI CCHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCC RQGEEITGFVDVALERAWRYRPGQPSEPIPMPEDVGLREKGERQQLLETLADFDDALMEA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LLMDEEPDPATILADLAVDTATNRVVPVLFGSALTGGGMRRLLKLLRHEAPDPHAAAARL HHCCCCCCCHHHHHHHHHHHCCCCEEHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHC GLDDEPALAVFKVTTGGAMGRLALGRVFGAALREGTELAGTRVGSLFRMQGDKTNKTADA CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCC DAGDVVAVAKLEQARPGTILGRSGLLAELTPAIPARNTALAIATRDRRDDVKLSAALHRL CCCCEEEEEEHHCCCCCEEECCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH CEEDPALAWEQDGDSHETLLRGINDEHLAVVLARLKRRYGVEVTSSPPRVAYRETIRKEA HCCCCCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHH GARGRHKKQSGGHGQFGDAVIEIRPLSRGEGFAFEDRITGGAIPRQWIPAVEAGARDAMM CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCHHHCCHHHCCCHHHHH KGPLGFPVVDVAVTLLDGSFHSVDSSELAFRTAGRMAMAEALEKASPCLLEPVFRVSVDM CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHEEECC PAGTGAKAGSALSARRGQILGLDQHPEWERWERVEALLPEAALHGLDAELRALSQGLASF CCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TATFDHMTELAGKHADDAIRMQAKAA HHHHHHHHHHHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]