| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199295
Identifier: 87199295
GI number: 87199295
Start: 1313066
End: 1313875
Strand: Reverse
Name: 87199295
Synonym: Saro_1274
Alternate gene names: NA
Gene position: 1313875-1313066 (Counterclockwise)
Preceding gene: 87199298
Following gene: 87199294
Centisome position: 36.89
GC content: 61.85
Gene sequence:
>810_bases ATGTCCTCACCGCCCATCCAGATCAGGACGAGCCCCCCGACGGGCTCCACGGGTGTCCGGCCAATACGTCTCCACGCAGC CCCCCGCGGCGATAACGACCGTATCAGGGCGGAAGTCGCTGGCCGCATCTTCTACTTCGGCAACGCGTCCGACACGCCGG AGATCGCGCACGCGAAGCGCCTGTGCAATTCTGCTTATGTAGCAAAGATCTCGGACGACTACACCGCCTTCGTCGATGAC GCGAAGAACTACTACAACACCGTCTTCGTGGTCGGCACCGACCCGGCGCGCGTCCGCAAGTTCCTGAGGACATATCGCCC GCTGTTCATGCGCAAGGCCAAGATCGCGCTGGTCAAGGAAAGCCGGCCACGCAGCCGGGCCCAGATGCTGAACACCGGGT TCGATGACGTCTTCGACCTCGATACACACCCCCTGGAGGCCAGTGTGCGCCTCGACGCGATCCTCGGTCGCGTGGCCCAC TCGCACGCTGCCGAGACTTTCGACGACGTTCTCAAGACCCACATGCGGTTCTATGCGGATACCAAGCTACTCGAGCGCGA GGTGCGCATCCTGGCATTGCTGATCGCCAACCGCGGCATGCCGGTACGCAAGCACCTGCTGACCGCTTCAACCAAGTCGC CGCACAAGTCCATCACGCCCAAGTCGTTGCAAGTCCTGATCTCGGGCCTCAGGGGCAAATTGAAGCCGAACTTCAGGATA GTGAGCCATGGCGCATCGGGATATTCCTTCGAAGAGGTATCTGCAGTGGCAGAACGGCTCGCCACCGCCACCAGAGCCGA GACTCATTGA
Upstream 100 bases:
>100_bases CCCCGGCTTACGCAGGATTGCATTAACCATTCGTCCGGATTGCAACCGATGCGGATACGACTAAGGATATGTACATATAT AAACGAAAGTTAATAAACGC
Downstream 100 bases:
>100_bases GGCGGCGAATCTGCGCGAGAAACTGCTGAAGCTGGCCGACTGCGTGGAGCGCGAATGCCGCCCGTCCCCGCTCGACTTCT TCGACGCGCGCGAGGCGATC
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSSPPIQIRTSPPTGSTGVRPIRLHAAPRGDNDRIRAEVAGRIFYFGNASDTPEIAHAKRLCNSAYVAKISDDYTAFVDD AKNYYNTVFVVGTDPARVRKFLRTYRPLFMRKAKIALVKESRPRSRAQMLNTGFDDVFDLDTHPLEASVRLDAILGRVAH SHAAETFDDVLKTHMRFYADTKLLEREVRILALLIANRGMPVRKHLLTASTKSPHKSITPKSLQVLISGLRGKLKPNFRI VSHGASGYSFEEVSAVAERLATATRAETH
Sequences:
>Translated_269_residues MSSPPIQIRTSPPTGSTGVRPIRLHAAPRGDNDRIRAEVAGRIFYFGNASDTPEIAHAKRLCNSAYVAKISDDYTAFVDD AKNYYNTVFVVGTDPARVRKFLRTYRPLFMRKAKIALVKESRPRSRAQMLNTGFDDVFDLDTHPLEASVRLDAILGRVAH SHAAETFDDVLKTHMRFYADTKLLEREVRILALLIANRGMPVRKHLLTASTKSPHKSITPKSLQVLISGLRGKLKPNFRI VSHGASGYSFEEVSAVAERLATATRAETH >Mature_268_residues SSPPIQIRTSPPTGSTGVRPIRLHAAPRGDNDRIRAEVAGRIFYFGNASDTPEIAHAKRLCNSAYVAKISDDYTAFVDDA KNYYNTVFVVGTDPARVRKFLRTYRPLFMRKAKIALVKESRPRSRAQMLNTGFDDVFDLDTHPLEASVRLDAILGRVAHS HAAETFDDVLKTHMRFYADTKLLEREVRILALLIANRGMPVRKHLLTASTKSPHKSITPKSLQVLISGLRGKLKPNFRIV SHGASGYSFEEVSAVAERLATATRAETH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29983; Mature: 29852
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPPIQIRTSPPTGSTGVRPIRLHAAPRGDNDRIRAEVAGRIFYFGNASDTPEIAHAKR CCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEHEEEEEEEEEECCCCCCHHHHHHHH LCNSAYVAKISDDYTAFVDDAKNYYNTVFVVGTDPARVRKFLRTYRPLFMRKAKIALVKE HHCCCEEEEECCCHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEC SRPRSRAQMLNTGFDDVFDLDTHPLEASVRLDAILGRVAHSHAAETFDDVLKTHMRFYAD CCCHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKLLEREVRILALLIANRGMPVRKHLLTASTKSPHKSITPKSLQVLISGLRGKLKPNFRI HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE VSHGASGYSFEEVSAVAERLATATRAETH EECCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSPPIQIRTSPPTGSTGVRPIRLHAAPRGDNDRIRAEVAGRIFYFGNASDTPEIAHAKR CCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEHEEEEEEEEEECCCCCCHHHHHHHH LCNSAYVAKISDDYTAFVDDAKNYYNTVFVVGTDPARVRKFLRTYRPLFMRKAKIALVKE HHCCCEEEEECCCHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEC SRPRSRAQMLNTGFDDVFDLDTHPLEASVRLDAILGRVAHSHAAETFDDVLKTHMRFYAD CCCHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKLLEREVRILALLIANRGMPVRKHLLTASTKSPHKSITPKSLQVLISGLRGKLKPNFRI HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE VSHGASGYSFEEVSAVAERLATATRAETH EECCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA